Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20k15
(662 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0412 + 29159918-29160046,29160148-29160297,29160385-291604... 219 2e-57
02_05_0373 + 28374298-28374380,28375126-28375303,28375975-283760... 178 3e-45
05_06_0262 - 26746180-26746278,26746371-26746493,26746584-267467... 153 2e-37
07_03_1297 + 25587445-25587502,25587646-25587740,25588426-255886... 107 1e-23
05_04_0141 - 18364065-18364176,18364722-18364948,18365183-183653... 89 2e-18
05_03_0442 + 14040280-14040371,14040449-14040517,14041217-140413... 48 9e-06
09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,353... 33 0.15
11_04_0007 - 12074472-12074538,12074908-12075116,12077202-120774... 32 0.35
03_06_0198 - 32299480-32299643,32300084-32300126,32300843-323009... 32 0.47
05_04_0359 + 20615362-20615549,20615701-20615767,20616126-206161... 31 0.62
12_01_0662 + 5601147-5601176,5601419-5601517,5601601-5601651,560... 30 1.9
02_02_0351 + 9257204-9261388 29 2.5
01_06_1397 - 37017468-37017561,37017763-37017836,37019128-370191... 29 2.5
02_05_0376 + 28406547-28406870 29 3.3
01_06_1282 + 35972234-35972244,35972451-35972522,35972714-359727... 29 3.3
01_06_1571 - 38314952-38315089,38315958-38315987,38316107-383162... 29 4.4
01_06_1513 - 37884198-37884485,37884966-37886951,37886976-378873... 29 4.4
>01_06_0412 +
29159918-29160046,29160148-29160297,29160385-29160447,
29160540-29160716,29160796-29160899,29162142-29162249,
29162336-29162432,29162540-29162637,29162718-29162859,
29162941-29163063,29163161-29163259
Length = 429
Score = 219 bits (535), Expect = 2e-57
Identities = 96/188 (51%), Positives = 149/188 (79%), Gaps = 2/188 (1%)
Frame = +3
Query: 105 SAIYILDVKGKVLISRNYRGDVDLGVIDKFMPLLMEKEEEGML-TPLL-QTSECTFAYIK 278
SA+++LD+KG+VL+ R+YRGDV ++F L++KE + +P++ + T+ +I+
Sbjct: 6 SALFLLDIKGRVLVWRDYRGDVSALQAERFFTKLLDKEGDSEAHSPVVYDDAGVTYMFIQ 65
Query: 279 TNNLYIVSTTKKNANIALVFVFLYKIVEVMTEYFKELEEESIRDNFVVIYELLDELIDFG 458
NN+++++ +++N N A + +FL+++V+V YF+ELEEES+RDNFVV+YELLDE++DFG
Sbjct: 66 HNNVFLLTASRQNCNAASILLFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFG 125
Query: 459 YPQTTDSKILQEYITQEGHKLEMQPKIPMAVTNAVSWRSEGIKYRKNEVFLDVIESVNLL 638
YPQ T++KIL E+I + +++E+ + PMAVTNAVSWRSEGI+Y+KNEVFLDV+ESVN+L
Sbjct: 126 YPQYTEAKILSEFIKTDAYRMEVSQRPPMAVTNAVSWRSEGIRYKKNEVFLDVVESVNIL 185
Query: 639 ANSNGNVL 662
NSNG ++
Sbjct: 186 VNSNGQIV 193
>02_05_0373 +
28374298-28374380,28375126-28375303,28375975-28376065,
28376162-28376256,28376379-28376468,28376789-28376837,
28376941-28377079,28377224-28377340,28377437-28377527,
28377604-28377746,28378009-28378123,28378439-28378483,
28378565-28378645
Length = 438
Score = 178 bits (434), Expect = 3e-45
Identities = 93/198 (46%), Positives = 132/198 (66%), Gaps = 9/198 (4%)
Frame = +3
Query: 96 MSSSAIYILDVKGKVLISRNYRGDVDLGVIDKFMPLLMEKEEEGMLTPLLQTSECTFAYI 275
+++SAIY L+++G VLI+R YR DV ++D F +M+ +E G P+ Q C+F Y+
Sbjct: 3 VAASAIYFLNLRGDVLINRLYRDDVGGNMVDAFRMHIMQTKELGTC-PVRQIGGCSFLYM 61
Query: 276 KTNNLYIVSTTKKNANIALVFVFLYKIVEVMTEYFK-ELEEESIRDNFVVIYELLDELID 452
+ +N+YIV NAN+A F F+ + V + YF +E++IR+NFV+IYELLDE++D
Sbjct: 62 RISNVYIVIVVSSNANVACAFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIMD 121
Query: 453 FGYPQTTDSKILQEYITQEGHKLEMQPK-----IPMA---VTNAVSWRSEGIKYRKNEVF 608
FGYPQ +IL+ YITQEG + K +P A VT AV WR EG+ Y+KNEVF
Sbjct: 122 FGYPQNLSPEILKLYITQEGVRSPFSSKPSDKPVPNATLQVTGAVGWRREGLMYKKNEVF 181
Query: 609 LDVIESVNLLANSNGNVL 662
LD++ESVNLL +S G+VL
Sbjct: 182 LDIVESVNLLMSSKGSVL 199
>05_06_0262 -
26746180-26746278,26746371-26746493,26746584-26746725,
26746824-26746921,26747012-26747108,26747215-26747322,
26747900-26748003,26748170-26748268,26748373-26748435,
26748538-26748687,26748769-26748900
Length = 404
Score = 153 bits (370), Expect = 2e-37
Identities = 76/188 (40%), Positives = 126/188 (67%), Gaps = 2/188 (1%)
Frame = +3
Query: 105 SAIYILDVKGKVLISRNYRGDVDLGVIDKFMPLLMEKEEEG-MLTPLLQTSE-CTFAYIK 278
SA+++LD+KG+VL+ R+YRGDV ++F L++KE + +L+P++ ++ +I+
Sbjct: 7 SALFLLDIKGRVLVWRDYRGDVSALQAERFFTKLLDKESDAEVLSPVVHDDAGVSYMFIQ 66
Query: 279 TNNLYIVSTTKKNANIALVFVFLYKIVEVMTEYFKELEEESIRDNFVVIYELLDELIDFG 458
NN+++++ +++N N A + +FL+++V+V YF+ELEEES+RDNFVV+YELLDE++DFG
Sbjct: 67 HNNVFLLTASRQNCNAASILLFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFG 126
Query: 459 YPQTTDSKILQEYITQEGHKLEMQPKIPMAVTNAVSWRSEGIKYRKNEVFLDVIESVNLL 638
YPQ T++ IL E+I + +++E VFLDV+ESVN+L
Sbjct: 127 YPQYTEAMILSEFIKTDAYRME--------------------------VFLDVVESVNIL 160
Query: 639 ANSNGNVL 662
NSNG ++
Sbjct: 161 VNSNGQIV 168
>07_03_1297 +
25587445-25587502,25587646-25587740,25588426-25588629,
25588843-25588959,25589084-25589212,25589591-25589717,
25590174-25590277,25590369-25590473,25590969-25591190,
25591869-25591967
Length = 419
Score = 107 bits (256), Expect = 1e-23
Identities = 65/204 (31%), Positives = 110/204 (53%), Gaps = 18/204 (8%)
Frame = +3
Query: 105 SAIYILDVKGKVLISRNYRGDVDLGVIDKFMPLLM--EKEEEGMLTPLLQTSECTFAYIK 278
S ++L +G ++ R+YRG+V G + F + +E P+ + ++K
Sbjct: 3 SQFFVLSQRGDHIVFRDYRGEVPKGSAEIFFRKVKFWNDDEAEEAPPVFNVDGVNYIHVK 62
Query: 279 TNNLYIVSTTKKNANIALVFVFLYKIVEVMTEYFKELEEESIRDNFVVIYELLDELIDFG 458
L+ V TT N + +L+ L +I V +Y L E+S+R NF+++YELLDE+IDFG
Sbjct: 63 VAGLFFVVTTMVNVSPSLLLELLQRIARVTKDYLGVLNEDSLRKNFILVYELLDEVIDFG 122
Query: 459 YPQTTDSKILQEYITQE------GHKLEMQP---------KIP-MAVTNAVSWRSEGIKY 590
YPQTT +++L+ YI E G + P ++P AVT +V G K
Sbjct: 123 YPQTTSTEVLKSYIFNEPIMVDAGRLPPLGPAAMFMQGTKRMPGTAVTKSVVATEPGGK- 181
Query: 591 RKNEVFLDVIESVNLLANSNGNVL 662
++ E+F+D+IE +++ +S+G +L
Sbjct: 182 KREEIFVDIIERISVTFSSSGYIL 205
>05_04_0141 -
18364065-18364176,18364722-18364948,18365183-18365390,
18365497-18365706,18366078-18366180,18366214-18366325,
18367061-18367204,18367835-18367936,18368081-18368186,
18368301-18368335
Length = 452
Score = 89.4 bits (212), Expect = 2e-18
Identities = 39/113 (34%), Positives = 70/113 (61%)
Frame = +3
Query: 315 NANIALVFVFLYKIVEVMTEYFKELEEESIRDNFVVIYELLDELIDFGYPQTTDSKILQE 494
+ N+ F FL ++ +V+T+Y +L E+ I+DNFV++Y++LDE++D G+P TT+ IL+E
Sbjct: 91 SVNMICDFQFLSRVADVLTDYLGDLNEDIIKDNFVLVYQILDEMMDNGFPLTTEPNILKE 150
Query: 495 YITQEGHKLEMQPKIPMAVTNAVSWRSEGIKYRKNEVFLDVIESVNLLANSNG 653
I +M + A + V WR+ +K NEV+++++E ++ N G
Sbjct: 151 MIAPPNIVSKMLNVVTDAAASFVPWRTTVVKDASNEVYVNIVEELDACVNREG 203
>05_03_0442 +
14040280-14040371,14040449-14040517,14041217-14041329,
14043110-14043209,14044508-14044682,14044768-14044881,
14045157-14045287,14048401-14048464,14048585-14048624,
14049002-14049225,14049634-14049876,14050145-14050313,
14050569-14050873,14051325-14051511,14051622-14051775,
14052145-14052207,14052300-14052396,14052500-14052589
Length = 809
Score = 47.6 bits (108), Expect = 9e-06
Identities = 39/160 (24%), Positives = 65/160 (40%), Gaps = 5/160 (3%)
Frame = +3
Query: 75 SLRNCFTMSSSAIYILDVKGKVLISRNYRGDVDLGVIDKFMPLLMEKEEEGMLTPLLQTS 254
S + M A I+ GK L+SR + D+ I+ + + G ++T
Sbjct: 279 STKKALKMVVLAASIISKSGKALVSRQFV-DMSRIRIEGLLAAFPKLVGTGKQHTYVETE 337
Query: 255 ECTFAYIKTNNLYIVSTTKKNANIALVFVFLYKIVEVMTEYFKELEEESIRDNFVVIYEL 434
+ Y LY++ T K +NI L + +++ EY L+EE + +
Sbjct: 338 NVRYVYQPIEGLYLLLITNKQSNILEDLDTLRLLSKLVPEYSPSLDEEGVCKTAFELIFA 397
Query: 435 LDELIDFGYPQTTDSKILQEYITQE-----GHKLEMQPKI 539
DE I G + + +++Y E HKL MQ KI
Sbjct: 398 FDEAISLGNKENVTVQQVKQYCEMESHEEKAHKLMMQSKI 437
>09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,
3536083-3536226,3536974-3537375,3537499-3537721,
3537830-3542368,3542480-3542599,3543005-3543038,
3543922-3544102,3544198-3544815,3545022-3551098,
3551139-3551304,3551508-3551614,3552056-3552178,
3553417-3553642
Length = 5100
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/64 (28%), Positives = 36/64 (56%)
Frame = +3
Query: 75 SLRNCFTMSSSAIYILDVKGKVLISRNYRGDVDLGVIDKFMPLLMEKEEEGMLTPLLQTS 254
++ +C + + IY+L+ K++ N R VD+GVI K + ++M + +GM T + +
Sbjct: 1177 AILSCVLVINEIIYMLNGCIKIM-QPNDRDLVDVGVISKLLSMIMTIKSDGMFTSIHKLC 1235
Query: 255 ECTF 266
+ F
Sbjct: 1236 DSIF 1239
>11_04_0007 -
12074472-12074538,12074908-12075116,12077202-12077463,
12077547-12078043,12078651-12078719,12079258-12079363,
12080272-12080295,12081184-12081242,12081383-12081520
Length = 476
Score = 32.3 bits (70), Expect = 0.35
Identities = 16/56 (28%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = +3
Query: 354 IVEVMTEYFKELEEESIRDNFVVIY---ELLDELIDFGYPQTTDSKILQEYITQEG 512
++ +TE+FKE +E+ D+ + + ++ D L++F S+ L E+ T+EG
Sbjct: 246 VLSFITEFFKEYLKENTLDDLIALLKKGKMEDNLLEFFPSAKRTSEALSEHFTKEG 301
>03_06_0198 -
32299480-32299643,32300084-32300126,32300843-32300929,
32301063-32301098,32301187-32301295,32301408-32301499,
32302029-32302115,32303887-32304222
Length = 317
Score = 31.9 bits (69), Expect = 0.47
Identities = 21/80 (26%), Positives = 34/80 (42%)
Frame = +3
Query: 270 YIKTNNLYIVSTTKKNANIALVFVFLYKIVEVMTEYFKELEEESIRDNFVVIYELLDELI 449
Y + +LY N V ++ VEV+ YF + E + NF Y +LDE++
Sbjct: 170 YRRYASLYFCMCIDAEDNELEVLEIIHHFVEVLDRYFGSVCELDLIFNFHKAYYILDEIL 229
Query: 450 DFGYPQTTDSKILQEYITQE 509
G Q + K + I +
Sbjct: 230 IAGELQESSKKNVARLIAAQ 249
>05_04_0359 +
20615362-20615549,20615701-20615767,20616126-20616191,
20616319-20616348,20616461-20616505,20617020-20617286
Length = 220
Score = 31.5 bits (68), Expect = 0.62
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Frame = +3
Query: 417 VVIYELLDELIDFGYPQTTDSKILQEYITQEGHKL---EMQPKIPMAVTNAVS 566
VVI+ +L D+ P+TT S+IL++Y T G L + +PK +A+ A++
Sbjct: 45 VVIFSSAGKLSDYCTPKTTLSRILEKYQTNSGKILWDEKHKPKELIAIEEALN 97
>12_01_0662 +
5601147-5601176,5601419-5601517,5601601-5601651,
5602822-5602995,5603869-5603928,5604759-5604800
Length = 151
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +3
Query: 345 LYKIVEVMTEYFKELEEESIRDNFVVIYELLDELIDFGYPQTTDSKILQEYITQEGHKLE 524
++ VE++ +F + E + NF +Y +LDE I G Q T + + E + E KLE
Sbjct: 93 IHLFVEILDHFFSNVCELDLVFNFHKVYLILDEFILAGELQETSKRAIIERM-GELEKLE 151
>02_02_0351 + 9257204-9261388
Length = 1394
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/68 (27%), Positives = 31/68 (45%)
Frame = +3
Query: 75 SLRNCFTMSSSAIYILDVKGKVLISRNYRGDVDLGVIDKFMPLLMEKEEEGMLTPLLQTS 254
S+ C +S +L ++ LIS YRG + +DK + +E+ LT L + S
Sbjct: 977 SMLTCVIVSERKTDLLRLQENKLISHGYRGALVFDNLDKVEDMSIEEMPHVSLTDLQKLS 1036
Query: 255 ECTFAYIK 278
T +K
Sbjct: 1037 SLTRLAVK 1044
>01_06_1397 -
37017468-37017561,37017763-37017836,37019128-37019193,
37019543-37019623,37019735-37019943,37020096-37020192,
37020497-37020514,37020597-37020727,37021040-37021088,
37021450-37021539,37021616-37021721,37021815-37021885,
37021963-37022037,37022059-37022120,37022677-37022887,
37023599-37024069,37024387-37024719
Length = 745
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +3
Query: 375 YFKELEEESIRDNFVVIYELLDELIDFGYPQTTDSKILQEYITQEGHKLEMQPKIPMAVT 554
+F+E +E +R F ++YE +EL+D Y ++ E + ++ P IP ++
Sbjct: 406 FFREFDENLLRKVFELMYE--NELLDLPYAPDVGDYLVCEDTNFAPNNKDVAP-IPEGMS 462
Query: 555 NA-VSWRSEGIKYRKNE 602
A V R G+ Y +++
Sbjct: 463 GAEVGKRLNGLAYPRDQ 479
>02_05_0376 + 28406547-28406870
Length = 107
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -3
Query: 210 PSVKA*ICRSHPDQHHHGNFSK 145
PS KA ICR+ P HHHG S+
Sbjct: 6 PSCKATICRT-PGNHHHGTTSE 26
>01_06_1282 +
35972234-35972244,35972451-35972522,35972714-35972747,
35973247-35973360,35974833-35975036,35975290-35975449,
35976093-35976240,35976345-35976422,35976854-35976938,
35977142-35977213
Length = 325
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +3
Query: 408 DNFVVIYELLDELIDFGYPQTTDSKILQEYITQEGHKLE 524
+N +I+ LDE++D G TD+K + E ++ GH LE
Sbjct: 258 ENLDLIFLCLDEVVDGGIVLETDAKAILEKVS--GHGLE 294
>01_06_1571 -
38314952-38315089,38315958-38315987,38316107-38316206,
38316322-38316383,38316465-38316531,38316889-38317076
Length = 194
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 417 VVIYELLDELIDFGYPQTTDSKILQEYITQEG 512
VVI+ +L D+ P+T+ S+IL++Y T G
Sbjct: 45 VVIFSSAGKLYDYCSPKTSLSRILEKYQTNSG 76
>01_06_1513 - 37884198-37884485,37884966-37886951,37886976-37887305,
37887397-37887471,37887543-37887734,37887922-37888173,
37888248-37888803,37888881-37889088,37889624-37889736,
37890029-37890060,37890545-37890619
Length = 1368
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/64 (23%), Positives = 31/64 (48%)
Frame = +3
Query: 3 PKSETYVCHKIM*TIVKCKINLKYSLRNCFTMSSSAIYILDVKGKVLISRNYRGDVDLGV 182
PK+ + + I+ +NL S + + ++ +++LD + V + Y D+DL +
Sbjct: 1244 PKTHSTMFLNILMAQSALSVNLSDSFHSSVMLENALVHLLDGRHVVEANDEYSNDLDLDI 1303
Query: 183 IDKF 194
KF
Sbjct: 1304 KPKF 1307
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,622,860
Number of Sequences: 37544
Number of extensions: 332153
Number of successful extensions: 694
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 673
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 687
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1667659452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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