SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20k09
         (686 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379    271   3e-73
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611...   269   1e-72
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998    269   1e-72
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349    268   2e-72
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467          268   3e-72
03_01_0034 + 318432-318825,318902-319851                              264   6e-71
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635...   248   3e-66
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505...   244   7e-65
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918...   130   1e-30
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788...   121   5e-28
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257...   118   6e-27
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324...   109   2e-24
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624...    93   2e-19
09_04_0325 + 16689613-16689772,16690043-16690329                       32   0.49 
12_02_0931 + 24512496-24512567,24512705-24512806,24512939-245129...    28   6.0  
04_03_0856 + 20336390-20336906,20337276-20337397                       28   6.0  
07_03_0252 - 15846143-15848473                                         28   8.0  
06_01_0487 - 3459853-3459917,3460058-3460408,3460991-3461114,346...    28   8.0  
03_05_0692 + 26800698-26800704,26802174-26802304,26802747-268028...    28   8.0  
03_02_0319 - 7421357-7421757,7421768-7421843,7424695-7424796,742...    28   8.0  

>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
          Length = 446

 Score =  271 bits (665), Expect = 3e-73
 Identities = 128/191 (67%), Positives = 142/191 (74%)
 Frame = +1

Query: 109 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 288
           MREI+H+Q GQCGNQIGAKFWE+I +EHGID TG Y G SDLQLERI+VYYNEAS     
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEAS----- 55

Query: 289 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 468
            GG+YVPRA+L+DLEPGTMD+VRSG YGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 56  -GGRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 114

Query: 469 AVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYXXXXXXX 648
           +VLDVVRKE ENCDCLQGFQ                   KIREEYPDR+M T+       
Sbjct: 115 SVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPK 174

Query: 649 XXXXXXXXYNA 681
                   YNA
Sbjct: 175 VSDTVVEPYNA 185


>05_04_0306 +
           20058640-20059159,20060406-20060819,20060921-20061190,
           20062179-20062849
          Length = 624

 Score =  269 bits (660), Expect = 1e-72
 Identities = 124/191 (64%), Positives = 143/191 (74%)
 Frame = +1

Query: 109 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 288
           MREI+H+Q GQCGNQIG+KFWE++ +EHGIDPTG Y GTSDLQLER++VYYNEAS     
Sbjct: 181 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASC---- 236

Query: 289 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 468
             G++VPRA+L+DLEPGTMD+VR+G YGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 237 --GRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 294

Query: 469 AVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYXXXXXXX 648
           +VLDVVRKE ENCDCLQGFQ                   KIREEYPDR+M T+       
Sbjct: 295 SVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPK 354

Query: 649 XXXXXXXXYNA 681
                   YNA
Sbjct: 355 VSDTVVEPYNA 365


>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
          Length = 444

 Score =  269 bits (660), Expect = 1e-72
 Identities = 126/191 (65%), Positives = 142/191 (74%)
 Frame = +1

Query: 109 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 288
           MREI+H+Q GQCGNQIGAKFWE+I +EHG+D TG Y G SDLQLERI+VYYNEAS     
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQLERINVYYNEAS----- 55

Query: 289 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 468
            GG+YVPRA+L+DLEPGTMD+VRSG +GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 56  -GGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 114

Query: 469 AVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYXXXXXXX 648
           +VLDVVRKE ENCDCLQGFQ                   KIREEYPDR+M T+       
Sbjct: 115 SVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPK 174

Query: 649 XXXXXXXXYNA 681
                   YNA
Sbjct: 175 VSDTVVEPYNA 185


>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
          Length = 447

 Score =  268 bits (658), Expect = 2e-72
 Identities = 124/191 (64%), Positives = 143/191 (74%)
 Frame = +1

Query: 109 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 288
           MREI+H+Q GQCGNQIG+KFWE++ +EHGIDPTG Y GTSDLQLER++VYYNEAS     
Sbjct: 1   MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASC---- 56

Query: 289 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 468
             G++VPRA+L+DLEPGTMD+VR+G YGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 57  --GRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 114

Query: 469 AVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYXXXXXXX 648
           +VLDVVRKE ENCDCLQGFQ                   KIREEYPDR+M T+       
Sbjct: 115 SVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPK 174

Query: 649 XXXXXXXXYNA 681
                   YNA
Sbjct: 175 VSDTVVEPYNA 185


>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
          Length = 447

 Score =  268 bits (657), Expect = 3e-72
 Identities = 126/191 (65%), Positives = 142/191 (74%)
 Frame = +1

Query: 109 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 288
           MREI+H+Q GQCGNQIGAKFWE+I +EHGID TG Y G SDLQLERI+VYYNEAS     
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEAS----- 55

Query: 289 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 468
            GG++VPRA+L+DLEPGTMD+VRSG +GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 56  -GGRFVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 114

Query: 469 AVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYXXXXXXX 648
           +VLDVVRKE ENCDCLQGFQ                   KIREEYPDR+M T+       
Sbjct: 115 SVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPK 174

Query: 649 XXXXXXXXYNA 681
                   YNA
Sbjct: 175 VSDTVVEPYNA 185


>03_01_0034 + 318432-318825,318902-319851
          Length = 447

 Score =  264 bits (646), Expect = 6e-71
 Identities = 124/191 (64%), Positives = 139/191 (72%)
 Frame = +1

Query: 109 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 288
           MREI+H+Q GQCGNQIGAKFWE++  EHGID TG Y G SDLQLER++VYYNEAS     
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQLERVNVYYNEASC---- 56

Query: 289 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 468
             G++VPRA+L+DLEPGTMD+VRSG YG +FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 57  --GRFVPRAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 114

Query: 469 AVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYXXXXXXX 648
           AVLDVVRKE ENCDCLQGFQ                   KIREEYPDR+M T+       
Sbjct: 115 AVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPK 174

Query: 649 XXXXXXXXYNA 681
                   YNA
Sbjct: 175 VSDTVVEPYNA 185


>01_06_1060 +
           34162161-34162554,34162613-34162675,34163262-34163531,
           34163944-34164623
          Length = 468

 Score =  248 bits (607), Expect = 3e-66
 Identities = 124/212 (58%), Positives = 142/212 (66%), Gaps = 21/212 (9%)
 Frame = +1

Query: 109 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 288
           MREI+H+Q GQCGNQIGAKFWE++ +EHGIDPTG Y G SDLQLER++VYYNEAS     
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASC---- 56

Query: 289 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 468
             G++VPRA+L+DLEPGTMD+VR+G YGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 57  --GRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 114

Query: 469 AVLDVVRKECENCDCLQ---------------------GFQXXXXXXXXXXXXXXXXXXX 585
           +VLDVVRKE ENCDCLQ                     GFQ                   
Sbjct: 115 SVLDVVRKEAENCDCLQGCRRLLEVHPLTCCESRNMMHGFQVCHSLGGGTGSGMGTLLIS 174

Query: 586 KIREEYPDRIMNTYXXXXXXXXXXXXXXXYNA 681
           KIREEYPDR+M T+               YNA
Sbjct: 175 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA 206


>03_05_0575 +
           25747813-25748206,25748567-25748614,25750296-25750565,
           25750658-25751334
          Length = 462

 Score =  244 bits (596), Expect = 7e-65
 Identities = 122/207 (58%), Positives = 139/207 (67%), Gaps = 16/207 (7%)
 Frame = +1

Query: 109 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 288
           MREI+H+Q GQCGNQIGAKFWE+I  EHG+DPTG Y GTS  QLERI+VY+NEAS     
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTGTSPQQLERINVYFNEAS----- 55

Query: 289 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 468
            GG++VPRA+L+DLEPGTMD++RSG  G +FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 56  -GGRHVPRAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 114

Query: 469 AVLDVVRKECENCDCLQ----------------GFQXXXXXXXXXXXXXXXXXXXKIREE 600
           +VLDVVRKE ENCDCLQ                GFQ                   KIREE
Sbjct: 115 SVLDVVRKEAENCDCLQDNRVIRQLGSIDNEQSGFQVCHSLGGGTGSGMGTLLISKIREE 174

Query: 601 YPDRIMNTYXXXXXXXXXXXXXXXYNA 681
           YPDR+M T+               YNA
Sbjct: 175 YPDRMMLTFSVFPSPKVSDTVVEPYNA 201


>07_03_0994 +
           23190344-23190456,23191367-23191581,23191663-23191862,
           23192420-23192928,23193048-23193363
          Length = 450

 Score =  130 bits (313), Expect = 1e-30
 Identities = 66/140 (47%), Positives = 89/140 (63%), Gaps = 1/140 (0%)
 Frame = +1

Query: 109 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 288
           MREI+ +  GQ G Q+G   WE+   EHGI+P G     SD     + V ++  +   +E
Sbjct: 1   MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTM--PSDTT---VGVAHDAFNTFFSE 55

Query: 289 SG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELV 465
           +G GK+VPRAI +DLEP  +D VR+G+Y QLF P+  + G+  A NN+A+GHYT G E+V
Sbjct: 56  TGAGKHVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIV 115

Query: 466 DAVLDVVRKECENCDCLQGF 525
           D  LD VRK  +NC  LQGF
Sbjct: 116 DLCLDRVRKLADNCTGLQGF 135


>11_02_0058 +
           7879859-7879951,7880844-7881078,7881165-7881535,
           7881648-7882304
          Length = 451

 Score =  121 bits (292), Expect = 5e-28
 Identities = 60/141 (42%), Positives = 83/141 (58%), Gaps = 2/141 (1%)
 Frame = +1

Query: 109 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQL--ERISVYYNEASVAT 282
           MRE + +  GQ G Q+G   WE+   EHGI P G   G   +    +  + +++E     
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGA-- 58

Query: 283 AESGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 462
               GK+VPRA+ +DLEP  +D VR+G Y QLF P+  + G+  A NN+A+GHYT G E+
Sbjct: 59  ----GKHVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEI 114

Query: 463 VDAVLDVVRKECENCDCLQGF 525
           VD  LD +RK  +NC  LQGF
Sbjct: 115 VDLCLDRIRKLADNCTGLQGF 135


>03_05_0974 +
           29324025-29324117,29325064-29325298,29325385-29325755,
           29325864-29326520
          Length = 451

 Score =  118 bits (283), Expect = 6e-27
 Identities = 61/139 (43%), Positives = 81/139 (58%)
 Frame = +1

Query: 109 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 288
           MRE + +  GQ G Q+G   WE+   EHGI   G  +  SD  +      +N     T  
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQADG--QMPSDRTVGGGDDAFNTFFSETG- 57

Query: 289 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 468
             GK+VPRA+ +DLEP  +D VR+G Y QLF P+  + G+  A NN+A+GHYT G E+VD
Sbjct: 58  -AGKHVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVD 116

Query: 469 AVLDVVRKECENCDCLQGF 525
             LD +RK  +NC  LQGF
Sbjct: 117 LCLDRIRKLADNCTGLQGF 135


>05_01_0412 -
           3248405-3248458,3248533-3248637,3248950-3249078,
           3249279-3249353,3249520-3249624,3249714-3249767,
           3249970-3250370,3250583-3250694,3250886-3251086,
           3251844-3251972
          Length = 454

 Score =  109 bits (263), Expect = 2e-24
 Identities = 55/174 (31%), Positives = 92/174 (52%), Gaps = 2/174 (1%)
 Frame = +1

Query: 112 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAES 291
           REI+ +Q GQCGNQIG +FW+ +  EHGI   G+    +    +R  V++ +A       
Sbjct: 3   REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRKDVFFYQA------D 56

Query: 292 GGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQ--SGAGNNWAKGHYTEGAELV 465
              Y+PRA+L+DLEP  ++ +++  Y  L+  +N    +   GAGNNWA G Y +G ++V
Sbjct: 57  DQHYIPRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASG-YHQGEQVV 115

Query: 466 DAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTY 627
           D ++D++ +E +  D L+GF                     + + Y  +++ TY
Sbjct: 116 DDIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTY 169


>03_02_0186 -
           6243487-6243799,6243892-6244400,6244495-6244557,
           6245482-6245681,6246125-6246519,6246776-6246888
          Length = 530

 Score = 92.7 bits (220), Expect = 2e-19
 Identities = 41/79 (51%), Positives = 55/79 (69%)
 Frame = +1

Query: 289 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 468
           S GK+VPRA+ +DLEP  +D V++G Y QLF P+  +  +  A NN+A+GHYT G E+VD
Sbjct: 117 SSGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARGHYTVGREVVD 176

Query: 469 AVLDVVRKECENCDCLQGF 525
             LD +RK  +NC  LQGF
Sbjct: 177 LCLDRLRKLADNCTGLQGF 195



 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 17/35 (48%), Positives = 22/35 (62%)
 Frame = +1

Query: 109 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGV 213
           MREI+ +  GQ G Q+G   WE+   EHGI P G+
Sbjct: 1   MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGL 35


>09_04_0325 + 16689613-16689772,16690043-16690329
          Length = 148

 Score = 31.9 bits (69), Expect = 0.49
 Identities = 18/29 (62%), Positives = 19/29 (65%), Gaps = 6/29 (20%)
 Frame = +1

Query: 364 AYGQLFR-----PDNFVFGQSGAGN-NWA 432
           AY Q+FR     PDNFVF QS AG  NWA
Sbjct: 119 AYSQIFRLPRFNPDNFVFHQSVAGGINWA 147


>12_02_0931 +
           24512496-24512567,24512705-24512806,24512939-24512984,
           24513292-24513355,24513997-24514348,24514497-24514749,
           24515069-24515311,24515399-24515518,24515710-24516158
          Length = 566

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
 Frame = +1

Query: 109 MREIVHLQAGQCGNQIGAKFWEIISEEHGI--DPTG--VYRGTSDLQLERISVYYNEASV 276
           MRE V +Q G   N +G+ FW    E  G+  DP    V++  + L ++   V Y   S 
Sbjct: 1   MREAVTVQVGGFANYVGSHFWNFQDELLGLADDPDADPVFKNAA-LDMD---VLYR--SG 54

Query: 277 ATAESGGKYVPRAILLD 327
            T +    Y PR + +D
Sbjct: 55  ETHQGVATYCPRLVSVD 71


>04_03_0856 + 20336390-20336906,20337276-20337397
          Length = 212

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -1

Query: 437 PLAQLLPAPDWPKTKLSGRK 378
           PL    P P+WP  KL+GRK
Sbjct: 30  PLPFASPPPEWPAGKLAGRK 49


>07_03_0252 - 15846143-15848473
          Length = 776

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
 Frame = +1

Query: 187 EHGIDPTGVYRGTSDLQLERISVYYNEASVATAESGGKYVPRAILLDLEPGTMD-AVRSG 363
           + GID T    G  D  +ER + +   +  A  E  G  +  A ++DL PG  D A    
Sbjct: 494 DSGIDFTA---GAHDSGMERATPWTPMSEAALFEQQGPPLAPAAVVDLPPGNADCADHQS 550

Query: 364 AYGQL 378
           +YG +
Sbjct: 551 SYGDM 555


>06_01_0487 -
           3459853-3459917,3460058-3460408,3460991-3461114,
           3461226-3461359,3462277-3462412,3462486-3462834,
           3463994-3464000,3464058-3464226
          Length = 444

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 16/45 (35%), Positives = 19/45 (42%)
 Frame = +1

Query: 337 GTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDA 471
           G   AV  G  G  FRP       SGA    A G   +G+ + DA
Sbjct: 12  GCWAAVARGLRGACFRPAGVAAAASGADEKGAAGGSAKGSHVHDA 56


>03_05_0692 +
           26800698-26800704,26802174-26802304,26802747-26802899,
           26803025-26803092,26803739-26803745,26803931-26804038,
           26804749-26804919,26805007-26805090
          Length = 242

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
 Frame = +1

Query: 289 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGN---NWAKGHYTEGAE 459
           +  K   +A+ LD    T+ + RS  Y Q+ +    +            W KGHY EGA 
Sbjct: 151 AASKIYTKALELDYFDATLYSNRSLCYLQIGKAQKALLDAKKCVKLRPKWMKGHYREGAA 210

Query: 460 LV 465
           L+
Sbjct: 211 LM 212


>03_02_0319 -
           7421357-7421757,7421768-7421843,7424695-7424796,
           7424911-7424982
          Length = 216

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +1

Query: 109 MREIVHLQAGQCGNQIGAKFWEIISEEHGI 198
           MRE V +Q G   N +G+ FW    E  G+
Sbjct: 1   MREAVTVQVGGFANYVGSHFWNFQDELLGL 30


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,190,939
Number of Sequences: 37544
Number of extensions: 277348
Number of successful extensions: 825
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 806
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -