Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20k09
(686 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 277 5e-75
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 273 7e-74
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 266 8e-72
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 266 8e-72
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 266 1e-71
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 266 1e-71
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 190 8e-49
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 190 8e-49
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 131 4e-31
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 130 1e-30
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 130 1e-30
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 129 2e-30
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 129 2e-30
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 128 3e-30
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 124 6e-29
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 124 6e-29
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 122 2e-28
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 122 2e-28
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 122 3e-28
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 122 3e-28
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 122 3e-28
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 120 1e-27
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 118 3e-27
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 100 1e-21
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 98 4e-21
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 98 4e-21
Z92790-2|CAB07224.2| 377|Caenorhabditis elegans Hypothetical pr... 28 7.2
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 277 bits (679), Expect = 5e-75
Identities = 133/191 (69%), Positives = 143/191 (74%)
Frame = +1
Query: 109 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 288
MREIVH+QAGQCGNQIGAKFWE+IS+EHGIDPTG Y G SDLQLERI+VYYNEAS
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEAS----- 55
Query: 289 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 468
GGKYVPRA L+DLEPGTMD+VR+G +GQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD
Sbjct: 56 -GGKYVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 114
Query: 469 AVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYXXXXXXX 648
VLDVVRKE E+CDCLQGFQ KIREEYPDRIM T+
Sbjct: 115 NVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIMMTFSVVPSPK 174
Query: 649 XXXXXXXXYNA 681
YNA
Sbjct: 175 VSDTVVEPYNA 185
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 273 bits (670), Expect = 7e-74
Identities = 130/191 (68%), Positives = 143/191 (74%)
Frame = +1
Query: 109 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 288
MREIVH+QAGQCGNQIGAKFWE+IS+EHGI P G Y+G SDLQLERI+VYYNEA+
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEAN----- 55
Query: 289 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 468
GGKYVPRA+L+DLEPGTMD+VRSG +GQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD
Sbjct: 56 -GGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 114
Query: 469 AVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYXXXXXXX 648
VLDVVRKE E CDCLQGFQ KIREEYPDRIM+++
Sbjct: 115 NVLDVVRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPK 174
Query: 649 XXXXXXXXYNA 681
YNA
Sbjct: 175 VSDTVVEPYNA 185
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 266 bits (653), Expect = 8e-72
Identities = 128/191 (67%), Positives = 141/191 (73%)
Frame = +1
Query: 109 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 288
MREIVH+QAGQCGNQIG+KFWE+IS+EHGIDP+G Y G SDLQLERI+VYYNEA
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAG----- 55
Query: 289 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 468
KYVPRA+L+DLEPGTMD+VRSG +GQLFRPDN+VFGQSGAGNNWAKGHYTEGAELVD
Sbjct: 56 -SNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVD 114
Query: 469 AVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYXXXXXXX 648
VLDVVRKE E+ DCLQGFQ KIREEYPDRIMNT+
Sbjct: 115 NVLDVVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPK 174
Query: 649 XXXXXXXXYNA 681
YNA
Sbjct: 175 VSDTVVEPYNA 185
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 266 bits (653), Expect = 8e-72
Identities = 128/191 (67%), Positives = 141/191 (73%)
Frame = +1
Query: 109 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 288
MREIVH+QAGQCGNQIG+KFWE+IS+EHGIDP+G Y G SDLQLERI+VYYNEA
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAG----- 55
Query: 289 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 468
KYVPRA+L+DLEPGTMD+VRSG +GQLFRPDN+VFGQSGAGNNWAKGHYTEGAELVD
Sbjct: 56 -SNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVD 114
Query: 469 AVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYXXXXXXX 648
VLDVVRKE E+ DCLQGFQ KIREEYPDRIMNT+
Sbjct: 115 NVLDVVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPK 174
Query: 649 XXXXXXXXYNA 681
YNA
Sbjct: 175 VSDTVVEPYNA 185
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 266 bits (652), Expect = 1e-71
Identities = 125/191 (65%), Positives = 141/191 (73%)
Frame = +1
Query: 109 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 288
MREIVH+QAGQCGNQIG+KFWE+IS+EHGI P G ++G +DLQLERI VYYNEA+
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEAN----- 55
Query: 289 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 468
GKYVPRA+L+DLEPGTMD+VRSG +GQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD
Sbjct: 56 -NGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 114
Query: 469 AVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYXXXXXXX 648
VLDV+RKE E CDCLQGFQ KIREEYPDRIM+++
Sbjct: 115 NVLDVIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPK 174
Query: 649 XXXXXXXXYNA 681
YNA
Sbjct: 175 VSDTVVEPYNA 185
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 266 bits (651), Expect = 1e-71
Identities = 125/191 (65%), Positives = 141/191 (73%)
Frame = +1
Query: 109 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 288
MREIVH+QAGQCGNQIG+KFWE+IS+EHGI P G ++G SDLQLERI VYYNEA+
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEAN----- 55
Query: 289 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 468
GKYVPRA+L+DLEPGTMD+VRSG +GQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD
Sbjct: 56 -NGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 114
Query: 469 AVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYXXXXXXX 648
VLDV+RKE E CDCLQGFQ KIREE+PDRIM+++
Sbjct: 115 NVLDVIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMSSFSVVPSPK 174
Query: 649 XXXXXXXXYNA 681
YNA
Sbjct: 175 VSDTVVEPYNA 185
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 190 bits (463), Expect = 8e-49
Identities = 92/192 (47%), Positives = 121/192 (63%)
Frame = +1
Query: 109 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 288
M+EI+++Q GQCGNQIGAKFWE ISEEHG+ G Y+G + QLERI+ YY E
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEME----- 55
Query: 289 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 468
G KYVPRAIL+DL+P +++ VRS YG+LF P+N V G+SGAGNNW++G+Y +GAE+VD
Sbjct: 56 -GRKYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVD 114
Query: 469 AVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYXXXXXXX 648
VL V+R+E E D L+GFQ K+REEY D+ ++T
Sbjct: 115 KVLSVIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAK 174
Query: 649 XXXXXXXXYNAV 684
YNA+
Sbjct: 175 VSDTVVEPYNAI 186
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 190 bits (463), Expect = 8e-49
Identities = 92/192 (47%), Positives = 121/192 (63%)
Frame = +1
Query: 109 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 288
M+EI+++Q GQCGNQIGAKFWE ISEEHG+ G Y+G + QLERI+ YY E
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEME----- 55
Query: 289 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 468
G KYVPRAIL+DL+P +++ VRS YG+LF P+N V G+SGAGNNW++G+Y +GAE+VD
Sbjct: 56 -GRKYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVD 114
Query: 469 AVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYXXXXXXX 648
VL V+R+E E D L+GFQ K+REEY D+ ++T
Sbjct: 115 KVLSVIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAK 174
Query: 649 XXXXXXXXYNAV 684
YNA+
Sbjct: 175 VSDTVVEPYNAI 186
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 131 bits (317), Expect = 4e-31
Identities = 62/139 (44%), Positives = 87/139 (62%), Gaps = 1/139 (0%)
Frame = +1
Query: 112 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTS-DLQLERISVYYNEASVATAE 288
RE V + GQ G QIG WE+ EHG+D G + + + + + +++E+
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESM----- 60
Query: 289 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 468
GK+VPRAI +DLEP +D +R+G YG LF PD + G+ A NN+A+GHYT G EL+D
Sbjct: 61 -NGKHVPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELID 119
Query: 469 AVLDVVRKECENCDCLQGF 525
VLD +RK+ ENC+ LQGF
Sbjct: 120 VVLDRIRKQTENCEGLQGF 138
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 130 bits (313), Expect = 1e-30
Identities = 59/139 (42%), Positives = 85/139 (61%)
Frame = +1
Query: 109 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 288
MRE++ + GQ G QIG WE+ EHGI P G S + E + ++++
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTG----- 55
Query: 289 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 468
G+YVPR+I +DLEP +D +R+G Y +LF P+ + G+ A NN+A+GHYT G EL+D
Sbjct: 56 -SGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELID 114
Query: 469 AVLDVVRKECENCDCLQGF 525
VLD +R+ +NC LQGF
Sbjct: 115 TVLDRIRRLADNCSGLQGF 133
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 130 bits (313), Expect = 1e-30
Identities = 59/139 (42%), Positives = 85/139 (61%)
Frame = +1
Query: 109 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 288
MRE++ + GQ G QIG WE+ EHGI P G S + E + ++++
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTG----- 55
Query: 289 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 468
G+YVPR+I +DLEP +D +R+G Y +LF P+ + G+ A NN+A+GHYT G EL+D
Sbjct: 56 -SGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELID 114
Query: 469 AVLDVVRKECENCDCLQGF 525
VLD +R+ +NC LQGF
Sbjct: 115 TVLDRIRRLADNCSGLQGF 133
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 129 bits (312), Expect = 2e-30
Identities = 58/139 (41%), Positives = 83/139 (59%)
Frame = +1
Query: 109 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 288
MRE++ + GQ G QIG WE+ EHGI P G E + ++++
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTG----- 55
Query: 289 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 468
G+YVPR+I +DLEP +D +R+G Y +LF P+ + G+ A NN+A+GHYT G EL+D
Sbjct: 56 -NGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELID 114
Query: 469 AVLDVVRKECENCDCLQGF 525
VLD +R+ +NC LQGF
Sbjct: 115 TVLDRIRRLADNCSGLQGF 133
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 129 bits (312), Expect = 2e-30
Identities = 58/139 (41%), Positives = 83/139 (59%)
Frame = +1
Query: 109 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 288
MRE++ + GQ G QIG WE+ EHGI P G E + ++++
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTG----- 55
Query: 289 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 468
G+YVPR+I +DLEP +D +R+G Y +LF P+ + G+ A NN+A+GHYT G EL+D
Sbjct: 56 -NGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELID 114
Query: 469 AVLDVVRKECENCDCLQGF 525
VLD +R+ +NC LQGF
Sbjct: 115 TVLDRIRRLADNCSGLQGF 133
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 128 bits (310), Expect = 3e-30
Identities = 66/139 (47%), Positives = 84/139 (60%)
Frame = +1
Query: 109 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 288
MREIV + GQ G QIG WE+ EHGI P G+ + +E S YN T
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQS--YNTFFSETPS 58
Query: 289 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 468
GK+VPRAI +DLEP +D VR+G Y +LF P+ + G+ A NN+A+GHYT G EL+D
Sbjct: 59 --GKHVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELID 116
Query: 469 AVLDVVRKECENCDCLQGF 525
V+D VR+ E C LQGF
Sbjct: 117 VVMDRVRRLTERCQSLQGF 135
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 124 bits (299), Expect = 6e-29
Identities = 56/139 (40%), Positives = 82/139 (58%)
Frame = +1
Query: 109 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 288
MRE++ + GQ G QIG WE+ EHGI P G + + ++++
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTG----- 55
Query: 289 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 468
G+YVPR+I +DLEP +D +R+G Y +LF P+ + G+ A NN+A+GHYT G EL+D
Sbjct: 56 -NGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELID 114
Query: 469 AVLDVVRKECENCDCLQGF 525
LD +R+ +NC LQGF
Sbjct: 115 TTLDRIRRLADNCSGLQGF 133
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 124 bits (299), Expect = 6e-29
Identities = 56/139 (40%), Positives = 82/139 (58%)
Frame = +1
Query: 109 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 288
MRE++ + GQ G QIG WE+ EHGI P G + + ++++
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTG----- 55
Query: 289 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 468
G+YVPR+I +DLEP +D +R+G Y +LF P+ + G+ A NN+A+GHYT G EL+D
Sbjct: 56 -NGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELID 114
Query: 469 AVLDVVRKECENCDCLQGF 525
LD +R+ +NC LQGF
Sbjct: 115 TTLDRIRRLADNCSGLQGF 133
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 122 bits (294), Expect = 2e-28
Identities = 60/140 (42%), Positives = 85/140 (60%), Gaps = 2/140 (1%)
Frame = +1
Query: 112 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG--VYRGTSDLQLERISVYYNEASVATA 285
RE++ + GQ G QIG WE+ EHGI P G V T D + E I+ ++ E +
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETA---- 63
Query: 286 ESGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELV 465
GGK+VPR + +DLEP +D VR+G Y LF P+ + G+ A N +A+G YT G E++
Sbjct: 64 --GGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMI 121
Query: 466 DAVLDVVRKECENCDCLQGF 525
D V+D V++ ENC+ LQGF
Sbjct: 122 DVVMDRVKRLAENCNGLQGF 141
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 122 bits (294), Expect = 2e-28
Identities = 60/138 (43%), Positives = 84/138 (60%)
Frame = +1
Query: 112 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAES 291
RE++ + GQ G Q+G WE+ EHGI P G+ L ++ S +N T
Sbjct: 7 REVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDS--FNTFFSETM-- 62
Query: 292 GGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDA 471
GK+VPRAI++DLEP +D +R+G Y LF P+ + G+ A NN+A+GHYT G E++D
Sbjct: 63 AGKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDV 122
Query: 472 VLDVVRKECENCDCLQGF 525
V+D VR+ ENC LQGF
Sbjct: 123 VMDRVRRLVENCRGLQGF 140
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 122 bits (293), Expect = 3e-28
Identities = 57/141 (40%), Positives = 83/141 (58%), Gaps = 2/141 (1%)
Frame = +1
Query: 109 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDL--QLERISVYYNEASVAT 282
MRE++ + GQ G QIG WE+ EHGI P G L + S +++E
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETG--- 57
Query: 283 AESGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 462
G++VPRA+++DLEP +D +R+G Y LF P+ + G+ A NN+A+GHYT G E+
Sbjct: 58 ---SGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEI 114
Query: 463 VDAVLDVVRKECENCDCLQGF 525
+D LD +R+ +NC LQGF
Sbjct: 115 IDLTLDRIRRLADNCTGLQGF 135
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 122 bits (293), Expect = 3e-28
Identities = 57/141 (40%), Positives = 83/141 (58%), Gaps = 2/141 (1%)
Frame = +1
Query: 109 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDL--QLERISVYYNEASVAT 282
MRE++ + GQ G QIG WE+ EHGI P G L + S +++E
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETG--- 57
Query: 283 AESGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 462
G++VPRA+++DLEP +D +R+G Y LF P+ + G+ A NN+A+GHYT G E+
Sbjct: 58 ---SGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEI 114
Query: 463 VDAVLDVVRKECENCDCLQGF 525
+D LD +R+ +NC LQGF
Sbjct: 115 IDLTLDRIRRLADNCTGLQGF 135
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 122 bits (293), Expect = 3e-28
Identities = 57/141 (40%), Positives = 83/141 (58%), Gaps = 2/141 (1%)
Frame = +1
Query: 109 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDL--QLERISVYYNEASVAT 282
MRE++ + GQ G QIG WE+ EHGI P G L + S +++E
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETG--- 57
Query: 283 AESGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 462
G++VPRA+++DLEP +D +R+G Y LF P+ + G+ A NN+A+GHYT G E+
Sbjct: 58 ---SGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEI 114
Query: 463 VDAVLDVVRKECENCDCLQGF 525
+D LD +R+ +NC LQGF
Sbjct: 115 IDLTLDRIRRLADNCTGLQGF 135
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 120 bits (288), Expect = 1e-27
Identities = 56/140 (40%), Positives = 82/140 (58%), Gaps = 2/140 (1%)
Frame = +1
Query: 112 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDL--QLERISVYYNEASVATA 285
RE++ + GQ G QIG WE+ EHGI P G L + S +++E
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETG---- 56
Query: 286 ESGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELV 465
G++VPRA+++DLEP +D +R+G Y LF P+ + G+ A NN+A+GHYT G E++
Sbjct: 57 --SGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEII 114
Query: 466 DAVLDVVRKECENCDCLQGF 525
D LD +R+ +NC LQGF
Sbjct: 115 DLTLDRIRRLADNCTGLQGF 134
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 118 bits (285), Expect = 3e-27
Identities = 56/139 (40%), Positives = 83/139 (59%)
Frame = +1
Query: 109 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 288
MRE++ + GQ G QIG WE+ EHGI P G D + ++++
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGTSM-EPDGNSGSLGTFFSDTGY---- 55
Query: 289 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 468
G++VPR+I +DLEP +D +R+GAY +LF P+ + G+ A NN+A+GHYT G E++D
Sbjct: 56 --GRHVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIID 113
Query: 469 AVLDVVRKECENCDCLQGF 525
LD +R+ NC+ LQGF
Sbjct: 114 TTLDRIRRLANNCEGLQGF 132
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 100 bits (239), Expect = 1e-21
Identities = 50/115 (43%), Positives = 71/115 (61%), Gaps = 2/115 (1%)
Frame = +1
Query: 187 EHGIDPTG--VYRGTSDLQLERISVYYNEASVATAESGGKYVPRAILLDLEPGTMDAVRS 360
EHGI P G V T D + E I+ ++ E + GGK+VPR + +DLEP +D VR+
Sbjct: 5 EHGIQPDGYHVEDDTYDEETETINTFFAETA------GGKHVPRCLFVDLEPTVVDEVRT 58
Query: 361 GAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKECENCDCLQGF 525
G Y LF P+ + G+ A N +A+G YT G E++D V+D V++ ENC+ LQGF
Sbjct: 59 GTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGF 113
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 98.3 bits (234), Expect = 4e-21
Identities = 52/173 (30%), Positives = 87/173 (50%), Gaps = 3/173 (1%)
Frame = +1
Query: 118 IVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAESGG 297
++ + GQCGNQ+ FW+ + +EHGI+ G D+ ++ ++Y
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFYQ-------ADDD 59
Query: 298 KYVPRAILLDLEPGTMDA-VRSGAYGQLFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVD 468
YVPRA+L+DLEP ++ ++S + LF DN GAGNNWA G Y +G E+ +
Sbjct: 60 HYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQE 118
Query: 469 AVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTY 627
++D++ +E EN + L G ++RE +P +++ TY
Sbjct: 119 KIMDIIIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTY 171
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 98.3 bits (234), Expect = 4e-21
Identities = 52/173 (30%), Positives = 87/173 (50%), Gaps = 3/173 (1%)
Frame = +1
Query: 118 IVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAESGG 297
++ + GQCGNQ+ FW+ + +EHGI+ G D+ ++ ++Y
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFYQ-------ADDD 59
Query: 298 KYVPRAILLDLEPGTMDA-VRSGAYGQLFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVD 468
YVPRA+L+DLEP ++ ++S + LF DN GAGNNWA G Y +G E+ +
Sbjct: 60 HYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQE 118
Query: 469 AVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTY 627
++D++ +E EN + L G ++RE +P +++ TY
Sbjct: 119 KIMDIIIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTY 171
>Z92790-2|CAB07224.2| 377|Caenorhabditis elegans Hypothetical
protein H03G16.2 protein.
Length = 377
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 133 AGQCGNQIGAKFWEIISEEHGIDPTGVYR 219
+G C ++G K WE+ SE G PTG+ +
Sbjct: 233 SGDCLKKMGKK-WEVTSEAVGPRPTGILK 260
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,987,437
Number of Sequences: 27780
Number of extensions: 204085
Number of successful extensions: 572
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 535
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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