Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20k01
(661 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0766 - 24425486-24426245,24430766-24430855,24430951-244310... 36 0.038
01_06_1254 + 35761046-35761162,35761332-35761416,35761877-357620... 33 0.15
06_03_1309 + 29223197-29223240,29223358-29223592,29223695-292237... 33 0.27
02_01_0703 + 5251901-5251950,5252783-5253554 33 0.27
04_04_1500 + 34010819-34011016,34013267-34013308,34014195-340142... 32 0.35
03_06_0523 + 34499533-34499705,34499808-34499917,34500037-345002... 32 0.35
09_02_0357 + 7788946-7789326,7789620-7789997 32 0.47
07_01_0281 - 2067696-2068862 32 0.47
01_01_1096 - 8659091-8659459,8660730-8661050,8661416-8661694,866... 31 0.61
08_01_0244 + 2016548-2017101,2017392-2019681,2019785-2019817 31 0.81
01_05_0420 + 21969797-21970939,21971307-21971369,21971488-219716... 31 0.81
04_01_0542 - 7005972-7007443,7008568-7008766,7008780-7008855,700... 31 1.1
01_06_1805 - 39999987-40000169,40000648-40000974,40001724-400020... 31 1.1
02_02_0568 + 11577804-11578676,11578956-11579042,11579043-11579141 30 1.9
11_04_0274 - 15667178-15667444,15668352-15668678,15669430-156695... 29 3.3
06_03_0246 + 18672704-18673111,18674069-18674164,18674362-186745... 29 3.3
12_02_0008 + 12239759-12239923,12240404-12240443,12241278-122414... 29 4.3
06_02_0136 + 12195422-12195435,12196047-12196122,12196896-121977... 29 4.3
03_05_0799 + 27809301-27811550 29 4.3
03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-69... 29 4.3
08_01_0395 - 3502750-3503033,3504844-3505663 28 5.7
08_01_0181 + 1530623-1531626,1531723-1531902,1531998-1532177,153... 28 5.7
04_04_0233 + 23801944-23802598,23802914-23803047,23803548-238037... 28 5.7
09_03_0052 + 11904633-11905616,11906324-11906491,11906588-11906977 28 7.6
06_03_0337 + 19678152-19678484,19678616-19678801,19679232-196794... 28 7.6
04_01_0100 + 1034057-1034308,1034962-1035078,1035152-1035382,103... 28 7.6
01_01_1092 - 8593414-8593776,8597750-8597931,8598080-8598152 28 7.6
01_01_0650 - 4948852-4950012 28 7.6
>06_03_0766 -
24425486-24426245,24430766-24430855,24430951-24431070,
24431568-24431746,24432046-24432231,24432454-24432547,
24432679-24432743,24433652-24433987
Length = 609
Score = 35.5 bits (78), Expect = 0.038
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +1
Query: 313 KICWNHRKGRCRFGHNCKYAH-DTDIQKTP 399
K+C N KG C FG C +AH +++++K P
Sbjct: 577 KLCENFNKGSCTFGDRCHFAHGESELRKPP 606
>01_06_1254 +
35761046-35761162,35761332-35761416,35761877-35762017,
35762118-35762206,35762519-35762701,35763509-35763697,
35763808-35763938,35764023-35764125,35765123-35765308
Length = 407
Score = 33.5 bits (73), Expect = 0.15
Identities = 10/32 (31%), Positives = 22/32 (68%)
Frame = +1
Query: 316 ICWNHRKGRCRFGHNCKYAHDTDIQKTPEELE 411
+C + G+C+ G CK++HD ++Q+ E+++
Sbjct: 75 VCEFFKVGQCQKGFKCKFSHDLNVQRKGEKID 106
>06_03_1309 +
29223197-29223240,29223358-29223592,29223695-29223783,
29223870-29223968,29224065-29224158,29224297-29224514,
29224861-29224967,29225298-29225472,29225596-29225743,
29226548-29226596,29228016-29228162,29229990-29229996,
29230417-29230482,29230773-29231991,29232073-29233149,
29233226-29233355,29233519-29233617,29233817-29233878,
29234429-29234533
Length = 1389
Score = 32.7 bits (71), Expect = 0.27
Identities = 10/32 (31%), Positives = 21/32 (65%)
Frame = +1
Query: 310 RKICWNHRKGRCRFGHNCKYAHDTDIQKTPEE 405
++IC N ++G C++G C+Y H + Q+ ++
Sbjct: 5 QEICRNFQRGSCKYGAQCRYLHASPHQQQQQQ 36
>02_01_0703 + 5251901-5251950,5252783-5253554
Length = 273
Score = 32.7 bits (71), Expect = 0.27
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +1
Query: 313 KICWNHRKGRCRFGHNCKYAH-DTDIQKT 396
K+C N KG C FG C +AH + +++K+
Sbjct: 242 KLCENFTKGSCTFGDRCHFAHGENELRKS 270
>04_04_1500 +
34010819-34011016,34013267-34013308,34014195-34014204,
34014526-34014586,34014621-34014678,34015266-34015412,
34015643-34016205,34018942-34019728
Length = 621
Score = 32.3 bits (70), Expect = 0.35
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 313 KICWNHRKGRCRFGHNCKYAHDTDIQK 393
K+C N KG C FG C +AH + Q+
Sbjct: 591 KLCENFVKGTCTFGDRCHFAHGENEQR 617
>03_06_0523 +
34499533-34499705,34499808-34499917,34500037-34500224,
34500984-34501451
Length = 312
Score = 32.3 bits (70), Expect = 0.35
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 310 RKICWNHRKGRCRFGHNCKYAHD 378
R +C+ +KG C G +C+Y+HD
Sbjct: 133 RGVCYAFQKGECNRGASCRYSHD 155
>09_02_0357 + 7788946-7789326,7789620-7789997
Length = 252
Score = 31.9 bits (69), Expect = 0.47
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 316 ICWNHRKGRCRFGHNCKYAHDTDIQKTPEEL 408
+C R+GRC G C+YAH + Q+ E+
Sbjct: 40 LCMKWREGRCHNGVACRYAHGEEDQRIVPEM 70
>07_01_0281 - 2067696-2068862
Length = 388
Score = 31.9 bits (69), Expect = 0.47
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 316 ICWNHRKGRCRFGHNCKYAHDTDIQKTPEEL 408
+C RKGRC G C+Y+H + Q+ E+
Sbjct: 326 LCSKWRKGRCHNGAACRYSHGEEEQRIVPEM 356
Score = 29.5 bits (63), Expect = 2.5
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1
Query: 334 KGRCRFGHNCKYAH 375
KG CR+G NCKY H
Sbjct: 372 KGWCRYGLNCKYCH 385
>01_01_1096 -
8659091-8659459,8660730-8661050,8661416-8661694,
8661781-8661897,8662142-8662210,8663204-8663397,
8663552-8663633
Length = 476
Score = 31.5 bits (68), Expect = 0.61
Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = +1
Query: 307 GRKICWNHRK-GRCRFGHNCKYAH 375
G+ IC + K G C+FG NCKY H
Sbjct: 110 GQPICEYYMKTGTCKFGTNCKYHH 133
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = +1
Query: 331 RKGRCRFGHNCKYAHDTDIQKTPEELEAEKQQY 429
R G C+FG CKY H P EL A K Y
Sbjct: 318 RTGDCKFGATCKYHH-------PRELSAPKSGY 343
>08_01_0244 + 2016548-2017101,2017392-2019681,2019785-2019817
Length = 958
Score = 31.1 bits (67), Expect = 0.81
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 319 CWNHRKGRCRFGHNCKYAHD 378
C + KGRC G NC+Y HD
Sbjct: 320 CHDFVKGRCSRGANCRYVHD 339
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 319 CWNHRKGRCRFGHNCKYAHDTDIQKTPEE 405
C + GRCR G NC++ H+ +++ +E
Sbjct: 235 CRDFVAGRCRRGSNCRFPHEDGVRRQFDE 263
>01_05_0420 +
21969797-21970939,21971307-21971369,21971488-21971616,
21972241-21972291,21972669-21972809,21972922-21973122,
21973201-21973419,21973582-21973700,21973772-21973862,
21975864-21975965,21976291-21976315,21976522-21976592
Length = 784
Score = 31.1 bits (67), Expect = 0.81
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +1
Query: 313 KICWNHRKGRCRFGHNCKYAHDT 381
K+C + G+C+ G+ CK++HDT
Sbjct: 433 KVCHFYLHGKCQQGNLCKFSHDT 455
>04_01_0542 -
7005972-7007443,7008568-7008766,7008780-7008855,
7009615-7009925
Length = 685
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +1
Query: 448 GAGTMTAAPPPEATLDPVSNTDDVIWEGGVNKKKLKRPGLSKN---LIPNKKVIKM 606
G + AAP P+AT + V T NKK+ K P L +N PN K I +
Sbjct: 75 GVAAVAAAPAPDATENEVVATKAANETAAKNKKRGKTPPLHRNPKTYRPNTKTIHL 130
>01_06_1805 -
39999987-40000169,40000648-40000974,40001724-40002017,
40002112-40002231,40002714-40002776,40003150-40003310,
40003864-40004035
Length = 439
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 289 GMQTINGRKIC-WNHRKGRCRFGHNCKYAHDT 381
G+ G ++C + R G C+FG NCK+ H T
Sbjct: 374 GLPLRPGEELCKFYSRYGICKFGANCKFDHPT 405
>02_02_0568 + 11577804-11578676,11578956-11579042,11579043-11579141
Length = 352
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/38 (31%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +1
Query: 316 ICWNHRK-GRCRFGHNCKYAHDTDIQKTPEELEAEKQQ 426
IC ++++ G C +G +CK+ HD K+ ++E E ++
Sbjct: 192 ICKDYKETGYCGYGDSCKFMHDRGDYKSGWQIEKEWEE 229
>11_04_0274 -
15667178-15667444,15668352-15668678,15669430-15669563,
15669669-15669726,15669842-15669961,15670814-15670876,
15671388-15671539,15673002-15673116,15673907-15673981,
15674474-15674538,15675020-15675128
Length = 494
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +1
Query: 289 GMQTINGRKIC-WNHRKGRCRFGHNCKYAH 375
G+ G IC + R G C+FG NCK+ H
Sbjct: 401 GLPLRPGEPICTFYSRYGICKFGPNCKFDH 430
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +1
Query: 331 RKGRCRFGHNCKYAHDTD 384
R G CRFG CK+ H D
Sbjct: 152 RTGLCRFGMTCKFNHPAD 169
>06_03_0246 +
18672704-18673111,18674069-18674164,18674362-18674571,
18675780-18675851,18675898-18675945
Length = 277
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +1
Query: 307 GRKICWNH-RKGRCRFGHNCKYAHDTD 384
G C ++ R GRC++G NC++ H D
Sbjct: 103 GEHDCLHYLRFGRCKYGMNCRFNHPPD 129
>12_02_0008 +
12239759-12239923,12240404-12240443,12241278-12241435,
12242400-12242462,12243149-12243268,12243388-12243684,
12245012-12245335,12246411-12246680
Length = 478
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +1
Query: 289 GMQTINGRKIC-WNHRKGRCRFGHNCKYAH 375
G+ G +C + R G C+FG NCK+ H
Sbjct: 384 GLPLRPGEPVCTFYSRYGICKFGPNCKFDH 413
>06_02_0136 +
12195422-12195435,12196047-12196122,12196896-12197707,
12197941-12198010,12199469-12199557,12199633-12199666
Length = 364
Score = 28.7 bits (61), Expect = 4.3
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +1
Query: 313 KICWNHRKGRCRFGHNCKYAH 375
++C ++KG C +G C+Y H
Sbjct: 30 QVCTFYQKGSCSYGSRCRYDH 50
>03_05_0799 + 27809301-27811550
Length = 749
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1
Query: 319 CWNHRKGRCRFGHNCKYAH 375
C + RKG CR G C+YAH
Sbjct: 312 CPDFRKGVCRRGDMCEYAH 330
>03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-693320,
693391-693518,693951-694010,694113-694163,694704-694821,
694990-695915,695916-697707,697810-697943,698029-698526
Length = 1774
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 310 RKICWNHRKGRCRFGHNCKYAH 375
R IC H G CR G +C Y H
Sbjct: 1752 RGICKFHENGYCRKGASCNYLH 1773
>08_01_0395 - 3502750-3503033,3504844-3505663
Length = 367
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1
Query: 313 KICWNHRKGRCRFGHNCKYAHDTDIQKTP 399
K+C R G C + NC +AH + + P
Sbjct: 91 KLCCKFRAGTCPYVTNCNFAHGMEELRKP 119
>08_01_0181 +
1530623-1531626,1531723-1531902,1531998-1532177,
1532363-1532442,1532528-1532701,1533001-1533118,
1533223-1533301
Length = 604
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 301 INGRKICWNHRKGRCRFGHNCKYAH 375
++ R+ C KG C+ G NC Y+H
Sbjct: 211 LSTRRPCHYFSKGICKNGQNCHYSH 235
>04_04_0233 +
23801944-23802598,23802914-23803047,23803548-23803730,
23804145-23804318
Length = 381
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +1
Query: 325 NHRKGRCRFGHNCKYAHDTDIQKTPEELEAEKQQYKSVIFEGAGTMTAAPPPE 483
+H R R H+ K Q P L ++QQ + GAG +A PPE
Sbjct: 43 HHHHHRRRHRHSKKPKPQPQPQPPPPPLPPQQQQQEPAAGAGAGADFSALPPE 95
>09_03_0052 + 11904633-11905616,11906324-11906491,11906588-11906977
Length = 513
Score = 27.9 bits (59), Expect = 7.6
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Frame = +1
Query: 445 EGAGTMTAAPPPEATLDPVSNTDDVIWEGGVNKKKLKRPGL-------SKNLIPNKKVIK 603
EG T+T AP P TLD V D V+ G K PGL S+ +K+++
Sbjct: 260 EGGPTLTEAPVPGTTLD-VIQVDGVL---GSQAKLFDTPGLLHGHQLTSRLTREEQKLVR 315
Query: 604 MYKEQKAR 627
+ KE + R
Sbjct: 316 VSKEMRPR 323
>06_03_0337 +
19678152-19678484,19678616-19678801,19679232-19679417,
19680840-19680926,19681045-19681086,19681164-19681253,
19681399-19681503,19681797-19681835,19681914-19682018,
19682463-19682531,19682587-19682736,19683156-19683335
Length = 523
Score = 27.9 bits (59), Expect = 7.6
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +1
Query: 466 AAPPPEATLDPVSNTDDVIWEGGVNKKKLKRPGLSKNLIPNKKVIKMYKEQKARDGKK 639
AA PPE+ +PV NT EG N +R +K + K K +++K +GKK
Sbjct: 25 AATPPESEPEPVHNTAACNSEGENNATGKRREHNNKKM----KEEKSKRKKKQGEGKK 78
>04_01_0100 +
1034057-1034308,1034962-1035078,1035152-1035382,
1038200-1038455,1038551-1038807,1038978-1039250,
1039617-1039898,1040045-1040165,1040351-1040520,
1040613-1040711
Length = 685
Score = 27.9 bits (59), Expect = 7.6
Identities = 9/25 (36%), Positives = 18/25 (72%), Gaps = 2/25 (8%)
Frame = +1
Query: 343 CRFGHNCKYAHDTD--IQKTPEELE 411
C++G +C+++HD D + + P +LE
Sbjct: 105 CKYGDSCRFSHDIDAYLAQKPADLE 129
>01_01_1092 - 8593414-8593776,8597750-8597931,8598080-8598152
Length = 205
Score = 27.9 bits (59), Expect = 7.6
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1
Query: 331 RKGRCRFGHNCKYAHDTD 384
R G C +G NC+Y H D
Sbjct: 62 RTGACGYGENCRYNHPRD 79
>01_01_0650 - 4948852-4950012
Length = 386
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 319 CWNHRKGRCRFGHNCKYAH 375
C + RKG C+ G C+YAH
Sbjct: 122 CPDFRKGGCKRGDACEYAH 140
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,381,284
Number of Sequences: 37544
Number of extensions: 317765
Number of successful extensions: 1014
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1012
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1655832080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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