Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20k01
         (661 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    30   0.074
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    30   0.074
Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein ...    25   2.8  
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    23   6.5  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   6.5  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   8.5  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   8.5  

>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 29.9 bits (64), Expect = 0.074
 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +1

Query: 316 ICWNHRK-GRCRFGHNCKYAHDTDIQKTPEELEAE 417
           IC ++++ G C FG +CK+ HD    K   ++E E
Sbjct: 180 ICKDYKETGYCGFGDSCKFLHDRSDYKHGWQMEQE 214


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 29.9 bits (64), Expect = 0.074
 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +1

Query: 316 ICWNHRK-GRCRFGHNCKYAHDTDIQKTPEELEAE 417
           IC ++++ G C FG +CK+ HD    K   ++E E
Sbjct: 180 ICKDYKETGYCGFGDSCKFLHDRSDYKHGWQMEQE 214


>Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein
           protein.
          Length = 134

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -1

Query: 361 SYVQTDIFLFCDSNIS 314
           SY QTD+FL C S +S
Sbjct: 14  SYPQTDVFLVCFSVVS 29


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 361 SYVQTDIFLFCDS 323
           SY QTD+FL C S
Sbjct: 74  SYPQTDVFLICYS 86


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 121 HIHHCYYWKMFHNPKERSFSGTNELIN 41
           H+HH   ++   +  ER  S  NEL N
Sbjct: 308 HLHHELLYRGLKSSYERYLSDPNELTN 334


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +1

Query: 211 SNPFVAAEQAKAAILEKHVKMVPGKDGM 294
           S PF+ +E   +A+ +      PG DG+
Sbjct: 537 STPFIDSEIVLSALAQLKPSFAPGPDGI 564


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +1

Query: 337 GRCRFGHNCKYAHDT 381
           G C   HN +Y H T
Sbjct: 327 GECHLDHNGRYTHST 341


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 657,324
Number of Sequences: 2352
Number of extensions: 11984
Number of successful extensions: 24
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)