Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20k01
(661 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U79569-1|AAD00321.1| 269|Homo sapiens no arches protein. 44 4e-04
EF191081-1|ABN05292.1| 269|Homo sapiens cleavage and polyadenyl... 44 4e-04
CR542161-1|CAG46958.1| 269|Homo sapiens CPSF4 protein. 44 4e-04
BC050738-1|AAH50738.1| 243|Homo sapiens CPSF4 protein protein. 44 4e-04
BC003101-1|AAH03101.1| 244|Homo sapiens cleavage and polyadenyl... 44 4e-04
AK131416-1|BAD18563.1| 892|Homo sapiens protein ( Homo sapiens ... 36 0.17
AK127776-1|BAC87128.1| 938|Homo sapiens protein ( Homo sapiens ... 36 0.17
AB111887-1|BAC98375.1| 1135|Homo sapiens KIAA2035 protein protein. 36 0.17
AB028987-1|BAA83016.2| 1315|Homo sapiens KIAA1064 protein protein. 33 0.68
BC025388-1|AAH25388.1| 322|Homo sapiens ring finger protein 113... 33 0.90
BC017585-1|AAH17585.1| 322|Homo sapiens ring finger protein 113... 33 0.90
AL136300-1|CAC42525.2| 322|Homo sapiens ring finger protein 113... 33 0.90
AF539427-1|AAN33063.1| 322|Homo sapiens zinc finger protein ZNF... 33 0.90
BC081541-1|AAH81541.1| 701|Homo sapiens poly (ADP-ribose) polym... 32 1.6
BC032001-1|AAH32001.1| 297|Homo sapiens ZC3H8 protein protein. 32 1.6
AL137255-1|CAB70657.1| 598|Homo sapiens hypothetical protein pr... 32 1.6
AL136766-1|CAB66700.1| 701|Homo sapiens hypothetical protein pr... 32 1.6
AC092645-3|AAY14855.1| 266|Homo sapiens unknown protein. 32 1.6
AC025816-1|AAF66161.1| 178|Homo sapiens unknown protein. 32 1.6
U19107-1|AAC13989.1| 507|Homo sapiens ZNF127 protein. 32 2.1
BC107745-1|AAI07746.1| 353|Homo sapiens ZBTB38 protein protein. 32 2.1
BC044639-1|AAH44639.1| 507|Homo sapiens makorin, ring finger pr... 32 2.1
AK025985-1|BAB15309.1| 326|Homo sapiens protein ( Homo sapiens ... 32 2.1
X98253-1|CAA66907.1| 343|Homo sapiens ZNF183 protein. 31 2.8
BT007175-1|AAP35839.1| 343|Homo sapiens zinc finger protein 183... 31 2.8
BC131534-1|AAI31535.1| 1386|Homo sapiens DEAH (Asp-Glu-Ala-Asp/H... 31 2.8
BC074776-1|AAH74776.1| 354|Homo sapiens muscleblind-like 3, iso... 31 2.8
BC074775-1|AAH74775.1| 354|Homo sapiens muscleblind-like 3, iso... 31 2.8
BC060778-1|AAH60778.2| 658|Homo sapiens DHX57 protein protein. 31 2.8
BC042090-1|AAH42090.1| 258|Homo sapiens MBNL3 protein protein. 31 2.8
BC020556-1|AAH20556.1| 343|Homo sapiens ring finger protein 113... 31 2.8
BC000832-1|AAH00832.1| 343|Homo sapiens ring finger protein 113... 31 2.8
AY072692-1|AAL65661.1| 354|Homo sapiens CHCR isoform G protein. 31 2.8
AL050310-8|CAI43108.1| 334|Homo sapiens muscleblind-like 3 (Dro... 31 2.8
AL050310-7|CAI43106.1| 354|Homo sapiens muscleblind-like 3 (Dro... 31 2.8
AL050310-6|CAI43107.1| 342|Homo sapiens muscleblind-like 3 (Dro... 31 2.8
AL050310-5|CAI43105.1| 304|Homo sapiens muscleblind-like 3 (Dro... 31 2.8
AL050310-4|CAI43104.1| 223|Homo sapiens muscleblind-like 3 (Dro... 31 2.8
AL050310-3|CAI43103.1| 242|Homo sapiens muscleblind-like 3 (Dro... 31 2.8
AL050310-2|CAI43102.1| 258|Homo sapiens muscleblind-like 3 (Dro... 31 2.8
AK057423-1|BAB71479.1| 433|Homo sapiens protein ( Homo sapiens ... 31 2.8
AK002178-1|BAA92124.1| 304|Homo sapiens protein ( Homo sapiens ... 31 2.8
AJ427919-1|CAD20870.1| 334|Homo sapiens CHCR protein protein. 31 2.8
AJ427918-1|CAD20869.1| 354|Homo sapiens CHCR protein protein. 31 2.8
AF491305-1|AAM09533.1| 354|Homo sapiens MBLX39 protein. 31 2.8
AF467070-1|AAL87670.1| 334|Homo sapiens Cys3His CCG1-required p... 31 2.8
AF334161-1|AAK13496.1| 291|Homo sapiens zinc finger protein pro... 31 2.8
AC002477-1|AAB67605.1| 343|Homo sapiens zinc-finger protein pro... 31 2.8
AB077699-1|BAB85649.1| 334|Homo sapiens hCHCR-R protein. 31 2.8
AB077698-1|BAB85648.1| 354|Homo sapiens hCHCR-G protein. 31 2.8
BC015715-1|AAH15715.1| 416|Homo sapiens makorin, ring finger pr... 31 3.6
BC001799-1|AAH01799.2| 364|Homo sapiens MKRN2 protein protein. 31 3.6
AL834512-1|CAD39168.1| 302|Homo sapiens hypothetical protein pr... 31 3.6
AK001901-1|BAA91968.1| 426|Homo sapiens protein ( Homo sapiens ... 31 3.6
CR457393-1|CAG33674.1| 170|Homo sapiens LOC55954 protein. 31 4.8
CR456353-1|CAG30239.1| 170|Homo sapiens Em:AC005529.5 protein. 31 4.8
BC009717-1|AAH09717.1| 170|Homo sapiens zinc finger, matrin typ... 31 4.8
AL160311-1|CAB77284.1| 170|Homo sapiens hypothetical protein pr... 31 4.8
AF302084-1|AAG30426.1| 416|Homo sapiens MAKORIN2 protein. 31 4.8
AF277170-1|AAG27595.1| 416|Homo sapiens Makorin RING zinc-finge... 31 4.8
AY372211-1|AAQ75759.1| 292|Homo sapiens unknown protein. 30 6.4
D26018-1|BAA05039.1| 491|Homo sapiens KIAA0039 protein. 30 8.4
BC108909-1|AAI08910.1| 427|Homo sapiens POLD3 protein protein. 30 8.4
BC108908-1|AAI08909.1| 360|Homo sapiens POLD3 protein protein. 30 8.4
BC020587-1|AAH20587.1| 168|Homo sapiens POLD3 protein protein. 30 8.4
>U79569-1|AAD00321.1| 269|Homo sapiens no arches protein.
Length = 269
Score = 44.4 bits (100), Expect = 4e-04
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Frame = +1
Query: 217 PFVAAEQAKAAILEKHVKMVPGKDGM---QTINGRK--ICWNHRKGRCRFGHNCKYAHDT 381
PF +++ AA+ E +K GK GM + I+G K +C + +G C+ G C++ H+
Sbjct: 29 PFPGMDKSGAAVCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEY 88
Query: 382 DIQKTPE 402
D+ K PE
Sbjct: 89 DMTKMPE 95
>EF191081-1|ABN05292.1| 269|Homo sapiens cleavage and
polyadenylation specific factor 4, 30kDa protein.
Length = 269
Score = 44.4 bits (100), Expect = 4e-04
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Frame = +1
Query: 217 PFVAAEQAKAAILEKHVKMVPGKDGM---QTINGRK--ICWNHRKGRCRFGHNCKYAHDT 381
PF +++ AA+ E +K GK GM + I+G K +C + +G C+ G C++ H+
Sbjct: 29 PFPGMDKSGAAVCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEY 88
Query: 382 DIQKTPE 402
D+ K PE
Sbjct: 89 DMTKMPE 95
>CR542161-1|CAG46958.1| 269|Homo sapiens CPSF4 protein.
Length = 269
Score = 44.4 bits (100), Expect = 4e-04
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Frame = +1
Query: 217 PFVAAEQAKAAILEKHVKMVPGKDGM---QTINGRK--ICWNHRKGRCRFGHNCKYAHDT 381
PF +++ AA+ E +K GK GM + I+G K +C + +G C+ G C++ H+
Sbjct: 29 PFPGMDKSGAAVCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEY 88
Query: 382 DIQKTPE 402
D+ K PE
Sbjct: 89 DMTKMPE 95
>BC050738-1|AAH50738.1| 243|Homo sapiens CPSF4 protein protein.
Length = 243
Score = 44.4 bits (100), Expect = 4e-04
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Frame = +1
Query: 217 PFVAAEQAKAAILEKHVKMVPGKDGM---QTINGRK--ICWNHRKGRCRFGHNCKYAHDT 381
PF +++ AA+ E +K GK GM + I+G K +C + +G C+ G C++ H+
Sbjct: 29 PFPGMDKSGAAVCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEY 88
Query: 382 DIQKTPE 402
D+ K PE
Sbjct: 89 DMTKMPE 95
>BC003101-1|AAH03101.1| 244|Homo sapiens cleavage and
polyadenylation specific factor 4, 30kDa protein.
Length = 244
Score = 44.4 bits (100), Expect = 4e-04
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Frame = +1
Query: 217 PFVAAEQAKAAILEKHVKMVPGKDGM---QTINGRK--ICWNHRKGRCRFGHNCKYAHDT 381
PF +++ AA+ E +K GK GM + I+G K +C + +G C+ G C++ H+
Sbjct: 29 PFPGMDKSGAAVCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEY 88
Query: 382 DIQKTPE 402
D+ K PE
Sbjct: 89 DMTKMPE 95
>AK131416-1|BAD18563.1| 892|Homo sapiens protein ( Homo sapiens
cDNA FLJ16526 fis, clone OCBBF2006987. ).
Length = 892
Score = 35.5 bits (78), Expect = 0.17
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 307 GRKICWNHRKGRCRFGHNCKYAHDTDIQKTPEELEAEKQQY 429
G++IC +GRC G CK+ HD +++K E + Q Y
Sbjct: 252 GKQICKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGY 292
>AK127776-1|BAC87128.1| 938|Homo sapiens protein ( Homo sapiens
cDNA FLJ45877 fis, clone OCBBF3008835. ).
Length = 938
Score = 35.5 bits (78), Expect = 0.17
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 307 GRKICWNHRKGRCRFGHNCKYAHDTDIQKTPEELEAEKQQY 429
G++IC +GRC G CK+ HD +++K E + Q Y
Sbjct: 76 GKQICKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGY 116
>AB111887-1|BAC98375.1| 1135|Homo sapiens KIAA2035 protein protein.
Length = 1135
Score = 35.5 bits (78), Expect = 0.17
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 307 GRKICWNHRKGRCRFGHNCKYAHDTDIQKTPEELEAEKQQY 429
G++IC +GRC G CK+ HD +++K E + Q Y
Sbjct: 220 GKQICKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGY 260
>AB028987-1|BAA83016.2| 1315|Homo sapiens KIAA1064 protein protein.
Length = 1315
Score = 33.5 bits (73), Expect = 0.68
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 307 GRKICWNHRKGRCRFGHNCKYAHDTDIQKTPE 402
G+ IC +GRC +G +C ++HD ++ K E
Sbjct: 404 GKVICKYFVEGRCTWGDHCNFSHDIELPKKRE 435
>BC025388-1|AAH25388.1| 322|Homo sapiens ring finger protein 113B
protein.
Length = 322
Score = 33.1 bits (72), Expect = 0.90
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 316 ICWNHRK-GRCRFGHNCKYAHDTDIQKTPEELEAEKQQYKSVIFE 447
IC ++++ G C FG +CK+ HD K E+E E ++ + I E
Sbjct: 195 ICKDYKETGFCGFGDSCKFLHDRSDYKLGWEIERELEEGRYCICE 239
>BC017585-1|AAH17585.1| 322|Homo sapiens ring finger protein 113B
protein.
Length = 322
Score = 33.1 bits (72), Expect = 0.90
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 316 ICWNHRK-GRCRFGHNCKYAHDTDIQKTPEELEAEKQQYKSVIFE 447
IC ++++ G C FG +CK+ HD K E+E E ++ + I E
Sbjct: 195 ICKDYKETGFCGFGDSCKFLHDRSDYKLGWEIERELEEGRYCICE 239
>AL136300-1|CAC42525.2| 322|Homo sapiens ring finger protein 113B
protein.
Length = 322
Score = 33.1 bits (72), Expect = 0.90
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 316 ICWNHRK-GRCRFGHNCKYAHDTDIQKTPEELEAEKQQYKSVIFE 447
IC ++++ G C FG +CK+ HD K E+E E ++ + I E
Sbjct: 195 ICKDYKETGFCGFGDSCKFLHDRSDYKLGWEIERELEEGRYCICE 239
>AF539427-1|AAN33063.1| 322|Homo sapiens zinc finger protein
ZNF183L1 protein.
Length = 322
Score = 33.1 bits (72), Expect = 0.90
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 316 ICWNHRK-GRCRFGHNCKYAHDTDIQKTPEELEAEKQQYKSVIFE 447
IC ++++ G C FG +CK+ HD K E+E E ++ + I E
Sbjct: 195 ICKDYKETGFCGFGDSCKFLHDRSDYKLGWEIERELEEGRYCICE 239
>BC081541-1|AAH81541.1| 701|Homo sapiens poly (ADP-ribose)
polymerase family, member 12 protein.
Length = 701
Score = 32.3 bits (70), Expect = 1.6
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 316 ICWNHRKGRCRFGHNCKYAHDTDIQKTPEELE 411
IC +G C+FG +CK +HD + E+LE
Sbjct: 180 ICQYFLQGECKFGTSCKRSHDFSNSENLEKLE 211
>BC032001-1|AAH32001.1| 297|Homo sapiens ZC3H8 protein protein.
Length = 297
Score = 32.3 bits (70), Expect = 1.6
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 307 GRKICWNHRKGRCRFGHNCKYAHDTDIQKTPEELEAEKQQY 429
G++IC + +C G CK+ HD +I+K E + Q Y
Sbjct: 193 GKQICKYFLERKCIKGDQCKFDHDAEIEKKKEMCKFYVQGY 233
>AL137255-1|CAB70657.1| 598|Homo sapiens hypothetical protein
protein.
Length = 598
Score = 32.3 bits (70), Expect = 1.6
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 316 ICWNHRKGRCRFGHNCKYAHDTDIQKTPEELE 411
IC +G C+FG +CK +HD + E+LE
Sbjct: 77 ICQYFLQGECKFGTSCKRSHDFSNSENLEKLE 108
>AL136766-1|CAB66700.1| 701|Homo sapiens hypothetical protein
protein.
Length = 701
Score = 32.3 bits (70), Expect = 1.6
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 316 ICWNHRKGRCRFGHNCKYAHDTDIQKTPEELE 411
IC +G C+FG +CK +HD + E+LE
Sbjct: 180 ICQYFLQGECKFGTSCKRSHDFSNSENLEKLE 211
>AC092645-3|AAY14855.1| 266|Homo sapiens unknown protein.
Length = 266
Score = 32.3 bits (70), Expect = 1.6
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 307 GRKICWNHRKGRCRFGHNCKYAHDTDIQKTPEELEAEKQQY 429
G++IC + +C G CK+ HD +I+K E + Q Y
Sbjct: 168 GKQICKYFLERKCIKGDQCKFDHDAEIEKKKEMCKFYVQGY 208
>AC025816-1|AAF66161.1| 178|Homo sapiens unknown protein.
Length = 178
Score = 32.3 bits (70), Expect = 1.6
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 316 ICWNHRKGRCRFGHNCKYAHDTDIQKTPEELE 411
IC +G C+FG +CK +HD + E+LE
Sbjct: 71 ICQYFLQGECKFGTSCKRSHDFSNSENLEKLE 102
>U19107-1|AAC13989.1| 507|Homo sapiens ZNF127 protein.
Length = 507
Score = 31.9 bits (69), Expect = 2.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 316 ICWNHRKGRCRFGHNCKYAHDTDIQKTPEE 405
IC + G+C+ G NC+Y+HD +K E
Sbjct: 100 ICRYYIHGQCKEGENCRYSHDLSGRKMATE 129
>BC107745-1|AAI07746.1| 353|Homo sapiens ZBTB38 protein protein.
Length = 353
Score = 31.9 bits (69), Expect = 2.1
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +1
Query: 277 PGKDGMQTINGRKICWNHRKGRCRFGHNCKYAHDTD--IQKTPEELEAEKQQYKSV 438
P K Q RK+ W G H CKY + D + K P++ E+++ K +
Sbjct: 82 PKKKSRQLKKMRKVNWRKEHGNRSPSHKCKYPAELDCAVGKAPQDKPFEEEETKEM 137
>BC044639-1|AAH44639.1| 507|Homo sapiens makorin, ring finger
protein, 3 protein.
Length = 507
Score = 31.9 bits (69), Expect = 2.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 316 ICWNHRKGRCRFGHNCKYAHDTDIQKTPEE 405
IC + G+C+ G NC+Y+HD +K E
Sbjct: 100 ICRYYIHGQCKEGENCRYSHDLSGRKMATE 129
>AK025985-1|BAB15309.1| 326|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22332 fis, clone HRC05753. ).
Length = 326
Score = 31.9 bits (69), Expect = 2.1
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +1
Query: 277 PGKDGMQTINGRKICWNHRKGRCRFGHNCKYAHDTD--IQKTPEELEAEKQQYKSV 438
P K Q RK+ W G H CKY + D + K P++ E+++ K +
Sbjct: 55 PKKKSRQLKKMRKVNWRKEHGNRSPSHKCKYPAELDCAVGKAPQDKPFEEEETKEM 110
>X98253-1|CAA66907.1| 343|Homo sapiens ZNF183 protein.
Length = 343
Score = 31.5 bits (68), Expect = 2.8
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 316 ICWNHRK-GRCRFGHNCKYAHDTDIQKTPEELEAEKQQYKSVIFE 447
IC ++++ G C FG +CK+ HD K ++E E + + ++E
Sbjct: 201 ICKDYKETGFCGFGDSCKFLHDRSDYKHGWQIERELDEGRYGVYE 245
>BT007175-1|AAP35839.1| 343|Homo sapiens zinc finger protein 183
(RING finger, C3HC4 type) protein.
Length = 343
Score = 31.5 bits (68), Expect = 2.8
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 316 ICWNHRK-GRCRFGHNCKYAHDTDIQKTPEELEAEKQQYKSVIFE 447
IC ++++ G C FG +CK+ HD K ++E E + + ++E
Sbjct: 201 ICKDYKETGFCGFGDSCKFLHDRSDYKHGWQIERELDEGRYGVYE 245
>BC131534-1|AAI31535.1| 1386|Homo sapiens DEAH (Asp-Glu-Ala-Asp/His)
box polypeptide 57 protein.
Length = 1386
Score = 31.5 bits (68), Expect = 2.8
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 304 NGRKICWNHRKGRCRFGHNCKYAHD 378
N +IC + KG C+FG C++ H+
Sbjct: 300 NSLEICKFYLKGNCKFGSKCRFKHE 324
>BC074776-1|AAH74776.1| 354|Homo sapiens muscleblind-like 3,
isoform G protein.
Length = 354
Score = 31.5 bits (68), Expect = 2.8
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +1
Query: 274 VPGKDGMQTINGRK--ICWNHRKGRCRFGHN-CKYAHDTD 384
+PG G + + K +C ++G C G N C+YAH TD
Sbjct: 163 MPGAVGPKLMRSDKLEVCREFQRGNCTRGENDCRYAHPTD 202
>BC074775-1|AAH74775.1| 354|Homo sapiens muscleblind-like 3,
isoform G protein.
Length = 354
Score = 31.5 bits (68), Expect = 2.8
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +1
Query: 274 VPGKDGMQTINGRK--ICWNHRKGRCRFGHN-CKYAHDTD 384
+PG G + + K +C ++G C G N C+YAH TD
Sbjct: 163 MPGAVGPKLMRSDKLEVCREFQRGNCTRGENDCRYAHPTD 202
>BC060778-1|AAH60778.2| 658|Homo sapiens DHX57 protein protein.
Length = 658
Score = 31.5 bits (68), Expect = 2.8
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 304 NGRKICWNHRKGRCRFGHNCKYAHD 378
N +IC + KG C+FG C++ H+
Sbjct: 300 NSLEICKFYLKGNCKFGSKCRFKHE 324
>BC042090-1|AAH42090.1| 258|Homo sapiens MBNL3 protein protein.
Length = 258
Score = 31.5 bits (68), Expect = 2.8
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +1
Query: 274 VPGKDGMQTINGRK--ICWNHRKGRCRFGHN-CKYAHDTD 384
+PG G + + K +C ++G C G N C+YAH TD
Sbjct: 67 MPGAVGPKLMRSDKLEVCREFQRGNCTRGENDCRYAHPTD 106
>BC020556-1|AAH20556.1| 343|Homo sapiens ring finger protein 113A
protein.
Length = 343
Score = 31.5 bits (68), Expect = 2.8
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 316 ICWNHRK-GRCRFGHNCKYAHDTDIQKTPEELEAEKQQYKSVIFE 447
IC ++++ G C FG +CK+ HD K ++E E + + ++E
Sbjct: 201 ICKDYKETGFCGFGDSCKFLHDRSDYKHGWQIERELDEGRYGVYE 245
>BC000832-1|AAH00832.1| 343|Homo sapiens ring finger protein 113A
protein.
Length = 343
Score = 31.5 bits (68), Expect = 2.8
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 316 ICWNHRK-GRCRFGHNCKYAHDTDIQKTPEELEAEKQQYKSVIFE 447
IC ++++ G C FG +CK+ HD K ++E E + + ++E
Sbjct: 201 ICKDYKETGFCGFGDSCKFLHDRSDYKHGWQIERELDEGRYGVYE 245
>AY072692-1|AAL65661.1| 354|Homo sapiens CHCR isoform G protein.
Length = 354
Score = 31.5 bits (68), Expect = 2.8
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +1
Query: 274 VPGKDGMQTINGRK--ICWNHRKGRCRFGHN-CKYAHDTD 384
+PG G + + K +C ++G C G N C+YAH TD
Sbjct: 163 MPGAVGPKLMRSDKLEVCREFQRGNCTRGENDCRYAHPTD 202
>AL050310-8|CAI43108.1| 334|Homo sapiens muscleblind-like 3
(Drosophila) protein.
Length = 334
Score = 31.5 bits (68), Expect = 2.8
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +1
Query: 274 VPGKDGMQTINGRK--ICWNHRKGRCRFGHN-CKYAHDTD 384
+PG G + + K +C ++G C G N C+YAH TD
Sbjct: 163 MPGAVGPKLMRSDKLEVCREFQRGNCTRGENDCRYAHPTD 202
>AL050310-7|CAI43106.1| 354|Homo sapiens muscleblind-like 3
(Drosophila) protein.
Length = 354
Score = 31.5 bits (68), Expect = 2.8
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +1
Query: 274 VPGKDGMQTINGRK--ICWNHRKGRCRFGHN-CKYAHDTD 384
+PG G + + K +C ++G C G N C+YAH TD
Sbjct: 163 MPGAVGPKLMRSDKLEVCREFQRGNCTRGENDCRYAHPTD 202
>AL050310-6|CAI43107.1| 342|Homo sapiens muscleblind-like 3
(Drosophila) protein.
Length = 342
Score = 31.5 bits (68), Expect = 2.8
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +1
Query: 274 VPGKDGMQTINGRK--ICWNHRKGRCRFGHN-CKYAHDTD 384
+PG G + + K +C ++G C G N C+YAH TD
Sbjct: 163 MPGAVGPKLMRSDKLEVCREFQRGNCTRGENDCRYAHPTD 202
>AL050310-5|CAI43105.1| 304|Homo sapiens muscleblind-like 3
(Drosophila) protein.
Length = 304
Score = 31.5 bits (68), Expect = 2.8
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +1
Query: 274 VPGKDGMQTINGRK--ICWNHRKGRCRFGHN-CKYAHDTD 384
+PG G + + K +C ++G C G N C+YAH TD
Sbjct: 113 MPGAVGPKLMRSDKLEVCREFQRGNCTRGENDCRYAHPTD 152
>AL050310-4|CAI43104.1| 223|Homo sapiens muscleblind-like 3
(Drosophila) protein.
Length = 223
Score = 31.5 bits (68), Expect = 2.8
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +1
Query: 274 VPGKDGMQTINGRK--ICWNHRKGRCRFGHN-CKYAHDTD 384
+PG G + + K +C ++G C G N C+YAH TD
Sbjct: 67 MPGAVGPKLMRSDKLEVCREFQRGNCTRGENDCRYAHPTD 106
>AL050310-3|CAI43103.1| 242|Homo sapiens muscleblind-like 3
(Drosophila) protein.
Length = 242
Score = 31.5 bits (68), Expect = 2.8
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +1
Query: 274 VPGKDGMQTINGRK--ICWNHRKGRCRFGHN-CKYAHDTD 384
+PG G + + K +C ++G C G N C+YAH TD
Sbjct: 67 MPGAVGPKLMRSDKLEVCREFQRGNCTRGENDCRYAHPTD 106
>AL050310-2|CAI43102.1| 258|Homo sapiens muscleblind-like 3
(Drosophila) protein.
Length = 258
Score = 31.5 bits (68), Expect = 2.8
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +1
Query: 274 VPGKDGMQTINGRK--ICWNHRKGRCRFGHN-CKYAHDTD 384
+PG G + + K +C ++G C G N C+YAH TD
Sbjct: 67 MPGAVGPKLMRSDKLEVCREFQRGNCTRGENDCRYAHPTD 106
>AK057423-1|BAB71479.1| 433|Homo sapiens protein ( Homo sapiens
cDNA FLJ32861 fis, clone TESTI2003589. ).
Length = 433
Score = 31.5 bits (68), Expect = 2.8
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 304 NGRKICWNHRKGRCRFGHNCKYAHD 378
N +IC + KG C+FG C++ H+
Sbjct: 198 NSLEICKFYLKGNCKFGSKCRFKHE 222
>AK002178-1|BAA92124.1| 304|Homo sapiens protein ( Homo sapiens
cDNA FLJ11316 fis, clone PLACE1010202. ).
Length = 304
Score = 31.5 bits (68), Expect = 2.8
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +1
Query: 274 VPGKDGMQTINGRK--ICWNHRKGRCRFGHN-CKYAHDTD 384
+PG G + + K +C ++G C G N C+YAH TD
Sbjct: 113 MPGAVGPKLMRSDKLEVCREFQRGNCTRGENDCRYAHPTD 152
>AJ427919-1|CAD20870.1| 334|Homo sapiens CHCR protein protein.
Length = 334
Score = 31.5 bits (68), Expect = 2.8
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +1
Query: 274 VPGKDGMQTINGRK--ICWNHRKGRCRFGHN-CKYAHDTD 384
+PG G + + K +C ++G C G N C+YAH TD
Sbjct: 163 MPGAVGPKLMRSDKLEVCREFQRGNCTRGENDCRYAHPTD 202
>AJ427918-1|CAD20869.1| 354|Homo sapiens CHCR protein protein.
Length = 354
Score = 31.5 bits (68), Expect = 2.8
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +1
Query: 274 VPGKDGMQTINGRK--ICWNHRKGRCRFGHN-CKYAHDTD 384
+PG G + + K +C ++G C G N C+YAH TD
Sbjct: 163 MPGAVGPKLMRSDKLEVCREFQRGNCTRGENDCRYAHPTD 202
>AF491305-1|AAM09533.1| 354|Homo sapiens MBLX39 protein.
Length = 354
Score = 31.5 bits (68), Expect = 2.8
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +1
Query: 274 VPGKDGMQTINGRK--ICWNHRKGRCRFGHN-CKYAHDTD 384
+PG G + + K +C ++G C G N C+YAH TD
Sbjct: 163 MPGAVGPKLMRSDKLEVCREFQRGNCTRGENDCRYAHPTD 202
>AF467070-1|AAL87670.1| 334|Homo sapiens Cys3His CCG1-required
protein isoform R protein.
Length = 334
Score = 31.5 bits (68), Expect = 2.8
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +1
Query: 274 VPGKDGMQTINGRK--ICWNHRKGRCRFGHN-CKYAHDTD 384
+PG G + + K +C ++G C G N C+YAH TD
Sbjct: 163 MPGAVGPKLMRSDKLEVCREFQRGNCTRGENDCRYAHPTD 202
>AF334161-1|AAK13496.1| 291|Homo sapiens zinc finger protein
protein.
Length = 291
Score = 31.5 bits (68), Expect = 2.8
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 307 GRKICWNHRKGRCRFGHNCKYAHDTDIQKTPE 402
G++IC + +C G CK+ HD +I+K E
Sbjct: 193 GKQICKYFLERKCIKGDQCKFDHDAEIEKKKE 224
>AC002477-1|AAB67605.1| 343|Homo sapiens zinc-finger protein
protein.
Length = 343
Score = 31.5 bits (68), Expect = 2.8
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 316 ICWNHRK-GRCRFGHNCKYAHDTDIQKTPEELEAEKQQYKSVIFE 447
IC ++++ G C FG +CK+ HD K ++E E + + ++E
Sbjct: 201 ICKDYKETGFCGFGDSCKFLHDRSDYKHGWQIERELDEGRYGVYE 245
>AB077699-1|BAB85649.1| 334|Homo sapiens hCHCR-R protein.
Length = 334
Score = 31.5 bits (68), Expect = 2.8
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +1
Query: 274 VPGKDGMQTINGRK--ICWNHRKGRCRFGHN-CKYAHDTD 384
+PG G + + K +C ++G C G N C+YAH TD
Sbjct: 163 MPGAVGPKLMRSDKLEVCREFQRGNCTRGENDCRYAHPTD 202
>AB077698-1|BAB85648.1| 354|Homo sapiens hCHCR-G protein.
Length = 354
Score = 31.5 bits (68), Expect = 2.8
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +1
Query: 274 VPGKDGMQTINGRK--ICWNHRKGRCRFGHN-CKYAHDTD 384
+PG G + + K +C ++G C G N C+YAH TD
Sbjct: 163 MPGAVGPKLMRSDKLEVCREFQRGNCTRGENDCRYAHPTD 202
>BC015715-1|AAH15715.1| 416|Homo sapiens makorin, ring finger
protein, 2 protein.
Length = 416
Score = 31.1 bits (67), Expect = 3.6
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 7/73 (9%)
Frame = +1
Query: 178 LGESTIQTSVFSNPFVAAEQAKAAILEKHVKMVPGKDGMQTI-------NGRKICWNHRK 336
+ E Q S+ SNP ++ + ++ H + + G+ + N +++C
Sbjct: 117 MAERKTQPSMVSNPGSCSDPQPSPEMKPHSYLDAIRSGLDDVEASSSYSNEQQLCPYAAA 176
Query: 337 GRCRFGHNCKYAH 375
G CRFG C Y H
Sbjct: 177 GECRFGDACVYLH 189
>BC001799-1|AAH01799.2| 364|Homo sapiens MKRN2 protein protein.
Length = 364
Score = 31.1 bits (67), Expect = 3.6
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 7/73 (9%)
Frame = +1
Query: 178 LGESTIQTSVFSNPFVAAEQAKAAILEKHVKMVPGKDGMQTI-------NGRKICWNHRK 336
+ E Q S+ SNP ++ + ++ H + + G+ + N +++C
Sbjct: 65 MAERKTQPSMVSNPGSCSDPQPSPEMKPHSYLDAIRSGLDDVEASSSYSNEQQLCPYAAA 124
Query: 337 GRCRFGHNCKYAH 375
G CRFG C Y H
Sbjct: 125 GECRFGDACVYLH 137
>AL834512-1|CAD39168.1| 302|Homo sapiens hypothetical protein
protein.
Length = 302
Score = 31.1 bits (67), Expect = 3.6
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 7/73 (9%)
Frame = +1
Query: 178 LGESTIQTSVFSNPFVAAEQAKAAILEKHVKMVPGKDGMQTI-------NGRKICWNHRK 336
+ E Q S+ SNP ++ + ++ H + + G+ + N +++C
Sbjct: 3 MAERKTQPSMVSNPGSCSDPQPSPEMKPHSYLDAIRSGLDDVEASSSYSNEQQLCPYAAA 62
Query: 337 GRCRFGHNCKYAH 375
G CRFG C Y H
Sbjct: 63 GECRFGDACVYLH 75
>AK001901-1|BAA91968.1| 426|Homo sapiens protein ( Homo sapiens
cDNA FLJ11039 fis, clone PLACE1004376. ).
Length = 426
Score = 31.1 bits (67), Expect = 3.6
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +1
Query: 316 ICWNHRKGRCRFGHNCKYAHDTDIQKTPEE 405
+C ++GRC G CK++HD +++ E+
Sbjct: 104 VCAFFKQGRCTKGDKCKFSHDLTLERKCEK 133
>CR457393-1|CAG33674.1| 170|Homo sapiens LOC55954 protein.
Length = 170
Score = 30.7 bits (66), Expect = 4.8
Identities = 11/31 (35%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Frame = +1
Query: 337 GRCRFGHNCKYAH--DTDIQKTPEELEAEKQ 423
G+C FG NC+++H + D+Q+ ++E E++
Sbjct: 64 GQCDFGSNCRFSHMSERDLQELSIQVEEERR 94
>CR456353-1|CAG30239.1| 170|Homo sapiens Em:AC005529.5 protein.
Length = 170
Score = 30.7 bits (66), Expect = 4.8
Identities = 11/31 (35%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Frame = +1
Query: 337 GRCRFGHNCKYAH--DTDIQKTPEELEAEKQ 423
G+C FG NC+++H + D+Q+ ++E E++
Sbjct: 64 GQCDFGSNCRFSHMSERDLQELSIQVEEERR 94
>BC009717-1|AAH09717.1| 170|Homo sapiens zinc finger, matrin type 5
protein.
Length = 170
Score = 30.7 bits (66), Expect = 4.8
Identities = 11/31 (35%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Frame = +1
Query: 337 GRCRFGHNCKYAH--DTDIQKTPEELEAEKQ 423
G+C FG NC+++H + D+Q+ ++E E++
Sbjct: 64 GQCDFGSNCRFSHMSERDLQELSIQVEEERR 94
>AL160311-1|CAB77284.1| 170|Homo sapiens hypothetical protein
protein.
Length = 170
Score = 30.7 bits (66), Expect = 4.8
Identities = 11/31 (35%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Frame = +1
Query: 337 GRCRFGHNCKYAH--DTDIQKTPEELEAEKQ 423
G+C FG NC+++H + D+Q+ ++E E++
Sbjct: 64 GQCDFGSNCRFSHMSERDLQELSIQVEEERR 94
>AF302084-1|AAG30426.1| 416|Homo sapiens MAKORIN2 protein.
Length = 416
Score = 30.7 bits (66), Expect = 4.8
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 7/73 (9%)
Frame = +1
Query: 178 LGESTIQTSVFSNPFVAAEQAKAAILEKHVKMVPGKDGMQTI-------NGRKICWNHRK 336
+ E Q S+ SNP ++ + ++ H + + G+ + N +++C
Sbjct: 117 MAERKTQPSMVSNPGSCSDPQPSPEMKPHSYLDAIRSGLDDVEASSSYSNEQQLCPYAAA 176
Query: 337 GRCRFGHNCKYAH 375
G CRFG C Y H
Sbjct: 177 GECRFGDACFYLH 189
>AF277170-1|AAG27595.1| 416|Homo sapiens Makorin RING zinc-finger
protein 2 protein.
Length = 416
Score = 30.7 bits (66), Expect = 4.8
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 7/73 (9%)
Frame = +1
Query: 178 LGESTIQTSVFSNPFVAAEQAKAAILEKHVKMVPGKDGMQTI-------NGRKICWNHRK 336
+ E Q S+ SNP ++ + ++ H + + G+ + N +++C
Sbjct: 117 MAERKTQPSMVSNPGSCSDPQPSPEMKPHSYLDAIRSGLDDVEASSSYSNEQQLCPYAAA 176
Query: 337 GRCRFGHNCKYAH 375
G CRFG C Y H
Sbjct: 177 GECRFGDACFYLH 189
>AY372211-1|AAQ75759.1| 292|Homo sapiens unknown protein.
Length = 292
Score = 30.3 bits (65), Expect = 6.4
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +1
Query: 274 VPGKDGMQTINGRK--ICWNHRKGRCRFGHN-CKYAHDTD 384
+PG G + + K +C ++G C G N C+YAH TD
Sbjct: 113 MPGAVGPKLMRSDKLEVCREFQRGICTRGENDCRYAHPTD 152
>D26018-1|BAA05039.1| 491|Homo sapiens KIAA0039 protein.
Length = 491
Score = 29.9 bits (64), Expect = 8.4
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 7/63 (11%)
Frame = +1
Query: 472 PPPEATLDPVSNTD----DVIWEGGVNKKKLKRPGLSKNLIPNKKVI---KMYKEQKARD 630
PPP L+PV T+ V G NK+K KR SK + + I K+Y+ + D
Sbjct: 378 PPPSPPLEPVPKTEPEPPSVKSSSGENKRKRKRVLKSKTYLDGEGCIVTEKVYESESCTD 437
Query: 631 GKK 639
++
Sbjct: 438 SEE 440
>BC108909-1|AAI08910.1| 427|Homo sapiens POLD3 protein protein.
Length = 427
Score = 29.9 bits (64), Expect = 8.4
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 7/63 (11%)
Frame = +1
Query: 472 PPPEATLDPVSNTD----DVIWEGGVNKKKLKRPGLSKNLIPNKKVI---KMYKEQKARD 630
PPP L+PV T+ V G NK+K KR SK + + I K+Y+ + D
Sbjct: 314 PPPSPPLEPVPKTEPEPPSVKSSSGENKRKRKRVLKSKTYLDGEGCIVTEKVYESESCTD 373
Query: 631 GKK 639
++
Sbjct: 374 SEE 376
>BC108908-1|AAI08909.1| 360|Homo sapiens POLD3 protein protein.
Length = 360
Score = 29.9 bits (64), Expect = 8.4
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 7/63 (11%)
Frame = +1
Query: 472 PPPEATLDPVSNTD----DVIWEGGVNKKKLKRPGLSKNLIPNKKVI---KMYKEQKARD 630
PPP L+PV T+ V G NK+K KR SK + + I K+Y+ + D
Sbjct: 247 PPPSPPLEPVPKTEPEPPSVKSSSGENKRKRKRVLKSKTYLDGEGCIVTEKVYESESCTD 306
Query: 631 GKK 639
++
Sbjct: 307 SEE 309
>BC020587-1|AAH20587.1| 168|Homo sapiens POLD3 protein protein.
Length = 168
Score = 29.9 bits (64), Expect = 8.4
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 7/63 (11%)
Frame = +1
Query: 472 PPPEATLDPVSNTD----DVIWEGGVNKKKLKRPGLSKNLIPNKKVI---KMYKEQKARD 630
PPP L+PV T+ V G NK+K KR SK + + I K+Y+ + D
Sbjct: 55 PPPSPPLEPVPKTEPEPPSVKSSSGENKRKRKRVLKSKTYLDGEGCIVTEKVYESESCTD 114
Query: 631 GKK 639
++
Sbjct: 115 SEE 117
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,823,917
Number of Sequences: 237096
Number of extensions: 1892119
Number of successful extensions: 4940
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 4669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4940
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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