Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20k01
(661 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74476-2|CAA98962.1| 200|Caenorhabditis elegans Hypothetical pr... 48 8e-06
Z82267-5|CAB05193.1| 203|Caenorhabditis elegans Hypothetical pr... 37 0.015
Z98866-11|CAB11564.2| 335|Caenorhabditis elegans Hypothetical p... 36 0.034
Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical pr... 36 0.034
U62896-1|AAB17868.1| 335|Caenorhabditis elegans PIE-1 protein. 36 0.034
Z82261-4|CAB05147.1| 203|Caenorhabditis elegans Hypothetical pr... 34 0.078
AL117204-11|CAB55126.1| 201|Caenorhabditis elegans Hypothetical... 31 0.55
AL110495-2|CAB60410.1| 203|Caenorhabditis elegans Hypothetical ... 31 0.55
Z46791-2|CAA86756.1| 283|Caenorhabditis elegans Hypothetical pr... 31 0.72
Z92803-1|CAB07242.2| 384|Caenorhabditis elegans Hypothetical pr... 31 0.96
AF304126-1|AAG50239.1| 384|Caenorhabditis elegans RING and zinc... 31 0.96
U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical pr... 30 1.3
AF125952-5|AAD14697.2| 327|Caenorhabditis elegans Serpentine re... 30 1.3
AC006722-11|AAW88389.1| 327|Caenorhabditis elegans Serpentine r... 30 1.3
Z99281-15|CAB16528.1| 199|Caenorhabditis elegans Hypothetical p... 30 1.7
U46674-4|AAA85756.1| 574|Caenorhabditis elegans Hypothetical pr... 30 1.7
AL117204-8|CAB55123.1| 205|Caenorhabditis elegans Hypothetical ... 30 1.7
Z74033-2|CAA98476.2| 419|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z74033-1|CAA98475.2| 460|Caenorhabditis elegans Hypothetical pr... 29 2.2
CU457740-10|CAM36340.1| 351|Caenorhabditis elegans Hypothetical... 29 2.2
Z81581-6|CAB04666.1| 679|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z71186-5|CAD56578.1| 101|Caenorhabditis elegans Hypothetical pr... 29 3.9
U41277-4|AAA82475.1| 277|Caenorhabditis elegans Hypothetical pr... 29 3.9
U41007-19|AAA82274.1| 432|Caenorhabditis elegans Hypothetical p... 29 3.9
Z81522-5|CAD98731.1| 663|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z81522-4|CAB04233.1| 771|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical pr... 28 6.8
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 28 6.8
Z81581-5|CAB04667.2| 646|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z81521-4|CAB04229.1| 367|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical pr... 27 8.9
AL117204-10|CAB55125.1| 196|Caenorhabditis elegans Hypothetical... 27 8.9
>Z74476-2|CAA98962.1| 200|Caenorhabditis elegans Hypothetical
protein W05B10.2 protein.
Length = 200
Score = 47.6 bits (108), Expect = 8e-06
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = +1
Query: 199 TSVFSNPFVAAEQAKAAILEKHVKMVPGKDGMQTINGRKICWNHRKGRCRFGHNCKYAH 375
+S+F N + E+ A +L +HV + + + C N+ KG+CRFG C+++H
Sbjct: 99 SSIFDNDYAREERMNARMLSRHVDLSDKPSEKERKKSKFTCKNYLKGKCRFGDKCRFSH 157
>Z82267-5|CAB05193.1| 203|Caenorhabditis elegans Hypothetical
protein F38C2.7 protein.
Length = 203
Score = 36.7 bits (81), Expect = 0.015
Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Frame = +1
Query: 178 LGESTIQTSVFSNPFVAAEQAKAAILEKHVKMVPGKDGMQTINGRKICWNHRKG-RCRFG 354
+ ++ + +FSN +A E H +M K + +C HR+G +C +G
Sbjct: 48 VNQNETEQKLFSNQSLANRDPCTIPDELHQEMKSLKKKEEAFK-TSLCGFHRRGQKCAYG 106
Query: 355 HNCKYAHDTDIQKTPEELEAEKQQYKSVIFEGAGT 459
CK+AH + P + + + YK+V+ T
Sbjct: 107 EKCKFAHSVHELRFP-QTKRNHRNYKTVLCNNFST 140
>Z98866-11|CAB11564.2| 335|Caenorhabditis elegans Hypothetical
protein Y49E10.14 protein.
Length = 335
Score = 35.5 bits (78), Expect = 0.034
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 304 NGRKICWNHRKGRCRFGHNCKYAHDTDIQ 390
N R+IC N +G CR+G C++ H +Q
Sbjct: 185 NRRQICHNFERGNCRYGPRCRFIHVEQMQ 213
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 331 RKGRCRFGHNCKYAHDTDIQKTPEELEAEKQQYKS 435
R+G C + NC YAH D + P +Q+Y S
Sbjct: 109 REGYCPYNDNCTYAHGQDELRVPR----RRQEYYS 139
>Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical
protein F11A10.8 protein.
Length = 302
Score = 35.5 bits (78), Expect = 0.034
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Frame = +1
Query: 217 PFVAAEQAKAAILEKH-VKMVP-GKD-GMQTINGRK--ICWNHRKGRCRFGHNCKYAHDT 381
PF +++ A+ K+ +KM P G ++ I+G K +C + +G C+ G C++ H+
Sbjct: 43 PFRDLDRSGKAVCRKNKLKMCPFGPTCPLRHIDGEKAVVCKHWLRGLCKKGDQCEFLHEY 102
Query: 382 DIQKTPE 402
D+ K PE
Sbjct: 103 DLTKMPE 109
Score = 27.5 bits (58), Expect = 8.9
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 310 RKICWNHRKGRCRFGHNCKYAH 375
R +C N+ G C G +C+YAH
Sbjct: 159 RAVCPNYLAGFCLQGPDCQYAH 180
>U62896-1|AAB17868.1| 335|Caenorhabditis elegans PIE-1 protein.
Length = 335
Score = 35.5 bits (78), Expect = 0.034
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 304 NGRKICWNHRKGRCRFGHNCKYAHDTDIQ 390
N R+IC N +G CR+G C++ H +Q
Sbjct: 185 NRRQICHNFERGNCRYGPRCRFIHVEQMQ 213
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 331 RKGRCRFGHNCKYAHDTDIQKTPEELEAEKQQYKS 435
R+G C + NC YAH D + P +Q+Y S
Sbjct: 109 REGYCPYNDNCTYAHGQDELRVPR----RRQEYYS 139
>Z82261-4|CAB05147.1| 203|Caenorhabditis elegans Hypothetical
protein C35D6.4 protein.
Length = 203
Score = 34.3 bits (75), Expect = 0.078
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 316 ICWNHRKG-RCRFGHNCKYAHDTDIQKTPEELEAEKQQYKSVIFEGAGT 459
+C HR+G +C +G CK+AH + P + + + YK+V+ T
Sbjct: 93 LCGFHRRGQKCAYGEKCKFAHSVHELRFP-QTKRNHRNYKTVLCNNFST 140
>AL117204-11|CAB55126.1| 201|Caenorhabditis elegans Hypothetical
protein Y116A8C.20 protein.
Length = 201
Score = 31.5 bits (68), Expect = 0.55
Identities = 12/43 (27%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +1
Query: 316 ICWNHRKGR-CRFGHNCKYAHDTDIQKTPEELEAEKQQYKSVI 441
+C +H++G+ C +G CK+AH + ++ + + YK+V+
Sbjct: 93 LCLSHKRGKTCIYGEQCKFAHGVH-ELRCQQAKKNHRNYKTVL 134
>AL110495-2|CAB60410.1| 203|Caenorhabditis elegans Hypothetical
protein Y60A9.3 protein.
Length = 203
Score = 31.5 bits (68), Expect = 0.55
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 328 HRKG-RCRFGHNCKYAHDTDIQKTPEELEAEKQQYKSVI 441
HR+G +C +G CK+AH + P + + + YK+V+
Sbjct: 97 HRRGQKCAYGEKCKFAHSVHELRFP-QTKRNHRNYKTVL 134
>Z46791-2|CAA86756.1| 283|Caenorhabditis elegans Hypothetical
protein C09G5.3 protein.
Length = 283
Score = 31.1 bits (67), Expect = 0.72
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 6/39 (15%)
Frame = +2
Query: 116 NVTRQKNLLQRLRSRNYQN------QAWEKALFKHQSFP 214
NVT N LQ + RN Q+ + W+K +FK QS P
Sbjct: 27 NVTHDLNTLQAMSDRNMQDFKAISDRTWDKMMFKQQSSP 65
>Z92803-1|CAB07242.2| 384|Caenorhabditis elegans Hypothetical
protein K01G5.1 protein.
Length = 384
Score = 30.7 bits (66), Expect = 0.96
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 316 ICWNHRK-GRCRFGHNCKYAHDTDIQKTPEELEAEKQQYK 432
IC ++++ G C FG +CK+ HD K E++ E + K
Sbjct: 180 ICKDYKETGFCTFGDSCKFVHDRSDYKHGWEIDEEYEAGK 219
>AF304126-1|AAG50239.1| 384|Caenorhabditis elegans RING and zinc
finger protein protein.
Length = 384
Score = 30.7 bits (66), Expect = 0.96
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 316 ICWNHRK-GRCRFGHNCKYAHDTDIQKTPEELEAEKQQYK 432
IC ++++ G C FG +CK+ HD K E++ E + K
Sbjct: 180 ICKDYKETGFCTFGDSCKFVHDRSDYKHGWEIDEEYEAGK 219
>U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical
protein F59A6.5 protein.
Length = 1286
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +1
Query: 223 VAAEQAKAAILEKHVKMVPGK-DGMQTINGRKICWNHRKGRCRFGHNCKYAHDTDIQKTP 399
V Q + ILE++V++ G D + I K W + + C + + K
Sbjct: 574 VEVRQHQEKILEENVRLRKGMADALAKIEEYKRSWQNSQETCERLERESATKEDKLDKLE 633
Query: 400 EELEAEKQQ 426
EEL+ +KQQ
Sbjct: 634 EELQEKKQQ 642
>AF125952-5|AAD14697.2| 327|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 61 protein.
Length = 327
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -2
Query: 156 LRSLCSRFFCLVTFITATTGRCSIIQKSVHFLVQMNLLI 40
L +LC R CL F T + R S ++ S+H+L+ M LI
Sbjct: 108 LHTLCYRTMCLKHFETRKSNRAS-LKFSLHYLIPMTPLI 145
>AC006722-11|AAW88389.1| 327|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 75 protein.
Length = 327
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -2
Query: 156 LRSLCSRFFCLVTFITATTGRCSIIQKSVHFLVQMNLLI 40
L +LC R CL F T + R S ++ S+H+L+ M LI
Sbjct: 108 LHTLCYRTMCLKHFETRKSNRAS-LKFSLHYLIPMTPLI 145
>Z99281-15|CAB16528.1| 199|Caenorhabditis elegans Hypothetical
protein Y57G11C.25 protein.
Length = 199
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +1
Query: 343 CRFGHNCKYAHDT-DIQKTPEELEAEKQQYKSVIFEGAGT 459
C +G CK+AH ++Q + L +YK+V+ + T
Sbjct: 83 CSYGEQCKFAHSVEELQLKHQNLGINNPKYKTVLCDNFST 122
>U46674-4|AAA85756.1| 574|Caenorhabditis elegans Hypothetical
protein T26A8.4 protein.
Length = 574
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 313 KICWNHRKGRCRFGHNCKYAHDTD 384
+IC R+G CR G NC Y+H +
Sbjct: 169 QICKFFREGYCRDGDNCLYSHQAE 192
>AL117204-8|CAB55123.1| 205|Caenorhabditis elegans Hypothetical
protein Y116A8C.17 protein.
Length = 205
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/43 (27%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 316 ICWNHRKGR-CRFGHNCKYAHDTDIQKTPEELEAEKQQYKSVI 441
+C +H++G+ C +G CK+AH + ++ + YK+V+
Sbjct: 97 LCLSHKRGKTCIYGEACKFAHGVH-ELRCQQTTRNHRNYKTVL 138
>Z74033-2|CAA98476.2| 419|Caenorhabditis elegans Hypothetical
protein F38B7.1b protein.
Length = 419
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1
Query: 337 GRCRFGHNCKYAHDTDIQKTP 399
GRC +G C+YAH +++K P
Sbjct: 170 GRCNYGERCQYAHG-ELEKRP 189
>Z74033-1|CAA98475.2| 460|Caenorhabditis elegans Hypothetical
protein F38B7.1a protein.
Length = 460
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1
Query: 337 GRCRFGHNCKYAHDTDIQKTP 399
GRC +G C+YAH +++K P
Sbjct: 211 GRCNYGERCQYAHG-ELEKRP 230
>CU457740-10|CAM36340.1| 351|Caenorhabditis elegans Hypothetical
protein C50E10.10 protein.
Length = 351
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -2
Query: 93 CSIIQKSVHFLVQMNLLI 40
C IIQKS HF + MN+L+
Sbjct: 49 CKIIQKSKHFHINMNILV 66
>Z81581-6|CAB04666.1| 679|Caenorhabditis elegans Hypothetical
protein T02E1.3b protein.
Length = 679
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Frame = +1
Query: 259 KHVKMVPGKDGMQTINGRKIC--WNHRKGRCRFGHNCKYAHDTD 384
+H ++ + KIC W R G C +G C YAH D
Sbjct: 55 QHQNFTSNREHNPALRKTKICDHWR-RSGSCSYGDACWYAHGED 97
>Z71186-5|CAD56578.1| 101|Caenorhabditis elegans Hypothetical
protein F23D12.6 protein.
Length = 101
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/30 (40%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
Frame = -2
Query: 84 IQKSVHFLVQMNLLINNK--TCLLFVVICS 1
+ K+ H L+Q+N ++N K C+L +V+CS
Sbjct: 15 VGKNFHILLQLNFIMNAKFLLCVLALVMCS 44
>U41277-4|AAA82475.1| 277|Caenorhabditis elegans Hypothetical
protein C06E4.3 protein.
Length = 277
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = -2
Query: 141 SRFFCLVTFITATTGRCSIIQKSVHFLVQMNLLINN 34
S F + IT ++G+ ++I K++ Q+N+L+NN
Sbjct: 59 SNFLIVPADITTSSGQDALISKTLEKFGQINILVNN 94
>U41007-19|AAA82274.1| 432|Caenorhabditis elegans Hypothetical
protein C33H5.17 protein.
Length = 432
Score = 28.7 bits (61), Expect = 3.9
Identities = 22/114 (19%), Positives = 48/114 (42%)
Frame = +1
Query: 298 TINGRKICWNHRKGRCRFGHNCKYAHDTDIQKTPEELEAEKQQYKSVIFEGAGTMTAAPP 477
T + K C + C+F NC+++H ++ + + + Y ++ EG +
Sbjct: 117 TCSAMKPCTHFLSSSCKFNENCRFSHGYSVELERIQ-DYQVPDYSFIVEEGL-VLVKGMS 174
Query: 478 PEATLDPVSNTDDVIWEGGVNKKKLKRPGLSKNLIPNKKVIKMYKEQKARDGKK 639
L +S D V K ++ K+L+P +V + K++++ + K
Sbjct: 175 DIWELGRISAIDTQNVAVKVLKSGIEISSKRKDLVPIGEVEEPTKQEQSSESWK 228
>Z81522-5|CAD98731.1| 663|Caenorhabditis elegans Hypothetical
protein F32B4.4b protein.
Length = 663
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +1
Query: 412 AEKQQYKSVIFEGAGTMTAAPPPEATLDPVSNTDDVIWEGGVNKKKLKRPGLSKN 576
AEK + + E A TM+ +P P T +PV T K+ + P S +
Sbjct: 75 AEKLAREKHVAEAASTMSTSPAPTPTPEPVVTTTTTTSAAPKRKEPIHAPESSSS 129
>Z81522-4|CAB04233.1| 771|Caenorhabditis elegans Hypothetical
protein F32B4.4a protein.
Length = 771
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +1
Query: 412 AEKQQYKSVIFEGAGTMTAAPPPEATLDPVSNTDDVIWEGGVNKKKLKRPGLSKN 576
AEK + + E A TM+ +P P T +PV T K+ + P S +
Sbjct: 183 AEKLAREKHVAEAASTMSTSPAPTPTPEPVVTTTTTTSAAPKRKEPIHAPESSSS 237
>Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical
protein K10D3.4 protein.
Length = 922
Score = 27.9 bits (59), Expect = 6.8
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 4/64 (6%)
Frame = -3
Query: 434 DLYCCFSASNSSGVFCISVSCAYLQLCPNRHLPFL*FQHIFLPFIVCIPSL----PGTIF 267
D Y C+S+ C S LCP PF+ + L + C P++ PG F
Sbjct: 719 DGYTCYSSPLLDQNVCCGASTELQSLCPAASTPFI--SALSLQPMQCTPNVDGACPGNFF 776
Query: 266 TCFS 255
FS
Sbjct: 777 CWFS 780
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +1
Query: 298 TINGRKICWNHRKGRCRFGHN-CKYAH-DTDIQK 393
TI G IC + GRC G N C+Y H + D+++
Sbjct: 140 TIGGIPICKEFQTGRCARGVNRCRYWHVNVDLER 173
>Z81581-5|CAB04667.2| 646|Caenorhabditis elegans Hypothetical
protein T02E1.3a protein.
Length = 646
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = +1
Query: 313 KIC--WNHRKGRCRFGHNCKYAHDTD 384
KIC W R G C +G C YAH D
Sbjct: 40 KICDHWR-RSGSCSYGDACWYAHGED 64
>Z81521-4|CAB04229.1| 367|Caenorhabditis elegans Hypothetical
protein F32A11.6 protein.
Length = 367
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 343 CRFGHNCKYAHDTDIQKTPEELEA-EKQQYKSVIFEGAGTMTAAP 474
C F NC++AH + + P +LE+ + +YK+ + + T P
Sbjct: 145 CTFAENCRFAHGEE-ELRPAKLESRQNNKYKTKLCDKYTTTGLCP 188
>Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical protein
T08G11.1b protein.
Length = 3185
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/64 (25%), Positives = 28/64 (43%)
Frame = +1
Query: 367 YAHDTDIQKTPEELEAEKQQYKSVIFEGAGTMTAAPPPEATLDPVSNTDDVIWEGGVNKK 546
+ H + + + + + Q + EGA PPP ++L+ SNT + G K+
Sbjct: 1311 HIHSIEAEMSDADYKTLMQTLSGNLAEGADLAIPPPPPPSSLES-SNTAAALTSPGKEKE 1369
Query: 547 KLKR 558
K R
Sbjct: 1370 KKDR 1373
>Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical protein
T08G11.1a protein.
Length = 3212
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/64 (25%), Positives = 28/64 (43%)
Frame = +1
Query: 367 YAHDTDIQKTPEELEAEKQQYKSVIFEGAGTMTAAPPPEATLDPVSNTDDVIWEGGVNKK 546
+ H + + + + + Q + EGA PPP ++L+ SNT + G K+
Sbjct: 1311 HIHSIEAEMSDADYKTLMQTLSGNLAEGADLAIPPPPPPSSLES-SNTAAALTSPGKEKE 1369
Query: 547 KLKR 558
K R
Sbjct: 1370 KKDR 1373
>AL117204-10|CAB55125.1| 196|Caenorhabditis elegans Hypothetical
protein Y116A8C.19 protein.
Length = 196
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 316 ICWNHRKG-RCRFGHNCKYAHDTDIQKTPEELEAEKQQYKSVIFEGAGT 459
+C R+G +C +G CK+AH + + + + YK+V+ + T
Sbjct: 88 LCGFQRRGQKCIYGEQCKFAHSVHELRFTQAKKTHR-NYKTVLCDKFST 135
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,893,120
Number of Sequences: 27780
Number of extensions: 305987
Number of successful extensions: 1131
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1131
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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