Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20j24
         (367 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77668-1|CAB01239.1|  576|Caenorhabditis elegans Hypothetical pr...    28   2.4  
Z92827-1|CAB07326.1|  394|Caenorhabditis elegans Hypothetical pr...    26   9.5  
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr...    26   9.5  
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr...    26   9.5  

>Z77668-1|CAB01239.1|  576|Caenorhabditis elegans Hypothetical
           protein R11G10.2 protein.
          Length = 576

 Score = 27.9 bits (59), Expect = 2.4
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -2

Query: 105 VKSLSFQVFNGILLIARFFLHNARCNN 25
           ++S++    +G L+I   FLHNA CN+
Sbjct: 303 IQSINLDTCDGSLVICVKFLHNADCNH 329


>Z92827-1|CAB07326.1|  394|Caenorhabditis elegans Hypothetical
           protein C29F7.1 protein.
          Length = 394

 Score = 25.8 bits (54), Expect = 9.5
 Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
 Frame = -2

Query: 192 FDNTREMRESYLFEDCKVIFTKCSSWF*FVKSLSFQVFNG-ILLIARFFLHNARCNNVRK 16
           FD  +E++   L ++  +    C+     V S+   V  G    I   F+HN  CN    
Sbjct: 54  FDAEQELKHPNLPKNVVIKIASCAKLGEGVGSVGVDVNKGNAAAIMELFMHNTECNYYNV 113

Query: 15  KKKKT 1
            +K T
Sbjct: 114 FRKYT 118


>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical protein
            T12D8.1 protein.
          Length = 2561

 Score = 25.8 bits (54), Expect = 9.5
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 324  YHILCKRVGSGQAFKRRTFRC 262
            YH+LC    +G   K RTF C
Sbjct: 2071 YHVLCAMQNNGFFIKDRTFIC 2091


>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical protein
            T12D8.1 protein.
          Length = 2561

 Score = 25.8 bits (54), Expect = 9.5
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 324  YHILCKRVGSGQAFKRRTFRC 262
            YH+LC    +G   K RTF C
Sbjct: 2071 YHVLCAMQNNGFFIKDRTFIC 2091


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,370,081
Number of Sequences: 27780
Number of extensions: 124322
Number of successful extensions: 292
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 287
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 292
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)