Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20j24
         (367 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    25   0.21 
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      21   3.4  
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    21   6.0  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    21   6.0  
AB006152-1|BAA24504.1|  178|Apis mellifera inositol 1,4,5-tripho...    21   6.0  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    20   8.0  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 25.4 bits (53), Expect = 0.21
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 172 HLTGVVKHWSSFRRASIKQQ 231
           HL+G   HW S RR S  Q+
Sbjct: 262 HLSGGTNHWDSGRRKSAAQR 281


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 15/45 (33%), Positives = 19/45 (42%)
 Frame = +2

Query: 95  SDFTN*NHDEHFVKITLQSSKRYDSRISRVLSNIGAHFAAPVSSS 229
           S F N   DE FV +TL    R       VLS    +F   + S+
Sbjct: 20  SAFENLRDDEDFVDVTLACDGRSLKAHRVVLSACSPYFRELLKST 64


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +2

Query: 14  FLRTLLHLAL 43
           FLR LLHLA+
Sbjct: 127 FLRVLLHLAM 136


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +2

Query: 143 LQSSKRYDSRISRVLSNIGA 202
           L+ + + DSR++R +  +GA
Sbjct: 374 LEENNKIDSRVTRFVVAVGA 393


>AB006152-1|BAA24504.1|  178|Apis mellifera inositol
           1,4,5-triphosphate recepter protein.
          Length = 178

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +2

Query: 14  FLRTLLHLAL 43
           FLR LLHLA+
Sbjct: 95  FLRVLLHLAM 104


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -3

Query: 350 QCLMYLCDDIIYYASES 300
           QCL Y  D IIY +  S
Sbjct: 335 QCLFYNTDFIIYSSLSS 351


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,206
Number of Sequences: 438
Number of extensions: 1225
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8680350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)