Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20j18
(664 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68748-8|CAL36498.1| 583|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z68748-4|CAD27622.1| 617|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z68748-3|CAA92953.2| 615|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z73969-6|CAA98236.1| 295|Caenorhabditis elegans Hypothetical pr... 29 2.2
AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in ... 29 2.9
AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical ... 28 5.1
AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical ... 28 5.1
Z92804-4|CAB07251.1| 335|Caenorhabditis elegans Hypothetical pr... 27 9.0
AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical ... 27 9.0
AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical ... 27 9.0
>Z68748-8|CAL36498.1| 583|Caenorhabditis elegans Hypothetical
protein F13H10.3c protein.
Length = 583
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = -1
Query: 196 PLMHFKNDTFFVKTAFLRTKAIVY-VDFVYS 107
PLM+FK+ TFF K L T +++Y + FV+S
Sbjct: 327 PLMNFKSPTFFTKFNVLGTISVMYLLMFVFS 357
>Z68748-4|CAD27622.1| 617|Caenorhabditis elegans Hypothetical
protein F13H10.3b protein.
Length = 617
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = -1
Query: 196 PLMHFKNDTFFVKTAFLRTKAIVY-VDFVYS 107
PLM+FK+ TFF K L T +++Y + FV+S
Sbjct: 361 PLMNFKSPTFFTKFNVLGTISVMYLLMFVFS 391
>Z68748-3|CAA92953.2| 615|Caenorhabditis elegans Hypothetical
protein F13H10.3a protein.
Length = 615
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = -1
Query: 196 PLMHFKNDTFFVKTAFLRTKAIVY-VDFVYS 107
PLM+FK+ TFF K L T +++Y + FV+S
Sbjct: 359 PLMNFKSPTFFTKFNVLGTISVMYLLMFVFS 389
>Z73969-6|CAA98236.1| 295|Caenorhabditis elegans Hypothetical
protein C12D8.8 protein.
Length = 295
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 6/46 (13%)
Frame = +3
Query: 447 GTRAVSCVSIKAPIQCPP------HCPLCALGLLQPVTPVVGLKRS 566
G R C + API CPP CP +G + P+ P+ + R+
Sbjct: 124 GQRGQDCTIVYAPIICPPVSQECVKCPPGPVGAIGPMGPIGSMGRA 169
>AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 4 protein.
Length = 339
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 381 SCPSLVTELKKSCRPSDHMGPFGTRAVSCVSIKAPIQCPPHC-PLCALGLLQPVTPVVGL 557
S PS V++ + +C+ S +A SC + AP+QC P C P C + P ++ L
Sbjct: 100 SAPS-VSQCQSTCQQS-------CQASSCYT-PAPVQCQPSCMPACKQSCVAPAPQIISL 150
>AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.5 protein.
Length = 335
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +3
Query: 480 APIQCPPHC-PLCALGLLQPVTPVVGL 557
AP+QC P C P+C + P V+ L
Sbjct: 125 APVQCQPSCMPVCEQSCVAPAPQVISL 151
>AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.4 protein.
Length = 335
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +3
Query: 480 APIQCPPHC-PLCALGLLQPVTPVVGL 557
AP+QC P C P+C + P V+ L
Sbjct: 125 APVQCQPSCMPVCEQSCVAPAPQVISL 151
>Z92804-4|CAB07251.1| 335|Caenorhabditis elegans Hypothetical
protein K05D4.6 protein.
Length = 335
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 451 LELFLAFPSKLLFNAPLTARYVLWVCCSPLHLW 549
L LF A+ +LF +P T ++V WV + LH W
Sbjct: 27 LHLFAAYC--ILFQSPATMKHVKWVMFN-LHFW 56
>AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.6 protein.
Length = 335
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +3
Query: 480 APIQCPPHC-PLCALGLLQPVTPVVGL 557
AP+QC P C P C + P V+ L
Sbjct: 125 APVQCQPSCMPACEQSCVAPAPQVISL 151
>AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.3 protein.
Length = 335
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +3
Query: 480 APIQCPPHC-PLCALGLLQPVTPVVGL 557
AP+QC P C P C + P V+ L
Sbjct: 125 APVQCQPSCMPACEQSCVAPAPQVISL 151
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,010,529
Number of Sequences: 27780
Number of extensions: 265752
Number of successful extensions: 603
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 602
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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