Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20j03
         (256 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118538-1|AAM49907.1| 1229|Drosophila melanogaster LD27166p pro...    27   3.5  
AE014296-3668|AAO41285.1| 1229|Drosophila melanogaster CG11471-P...    27   3.5  
AE014296-3667|AAF51823.2| 1229|Drosophila melanogaster CG11471-P...    27   3.5  
AE014296-3666|AAF51822.2| 1229|Drosophila melanogaster CG11471-P...    27   3.5  

>AY118538-1|AAM49907.1| 1229|Drosophila melanogaster LD27166p
           protein.
          Length = 1229

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
 Frame = -1

Query: 190 FLNIVKTLQSFYVNTIFYHFHKFFDR---YQSVEI 95
           F N  KTL  +Y+ +I++ F + FD+   YQ V++
Sbjct: 152 FKNDYKTLYPWYMESIWWIFKQLFDKGLVYQGVKV 186


>AE014296-3668|AAO41285.1| 1229|Drosophila melanogaster CG11471-PD,
           isoform D protein.
          Length = 1229

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
 Frame = -1

Query: 190 FLNIVKTLQSFYVNTIFYHFHKFFDR---YQSVEI 95
           F N  KTL  +Y+ +I++ F + FD+   YQ V++
Sbjct: 152 FKNDYKTLYPWYMESIWWIFKQLFDKGLVYQGVKV 186


>AE014296-3667|AAF51823.2| 1229|Drosophila melanogaster CG11471-PC,
           isoform C protein.
          Length = 1229

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
 Frame = -1

Query: 190 FLNIVKTLQSFYVNTIFYHFHKFFDR---YQSVEI 95
           F N  KTL  +Y+ +I++ F + FD+   YQ V++
Sbjct: 152 FKNDYKTLYPWYMESIWWIFKQLFDKGLVYQGVKV 186


>AE014296-3666|AAF51822.2| 1229|Drosophila melanogaster CG11471-PA,
           isoform A protein.
          Length = 1229

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
 Frame = -1

Query: 190 FLNIVKTLQSFYVNTIFYHFHKFFDR---YQSVEI 95
           F N  KTL  +Y+ +I++ F + FD+   YQ V++
Sbjct: 152 FKNDYKTLYPWYMESIWWIFKQLFDKGLVYQGVKV 186


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,418,216
Number of Sequences: 53049
Number of extensions: 127784
Number of successful extensions: 192
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 192
length of database: 24,988,368
effective HSP length: 64
effective length of database: 21,593,232
effective search space used: 431864640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)