Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20j02
         (607 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.           24   4.4  
AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.    23   5.8  
DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    23   7.7  
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    23   7.7  
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    23   7.7  

>AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.
          Length = 194

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 532 KEIYCSRQLFRNKNQLQV 585
           KE YC R+ F  + QLQ+
Sbjct: 138 KECYCCRESFLRERQLQL 155


>AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.
          Length = 163

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 252 MASPNPEIDLSSMFISKVNNSKSPTRSEPTS 344
           +ASP+  + LS + +SK + S S + S   S
Sbjct: 81  VASPHSALSLSPVSVSKFDTSASTSNSSNAS 111


>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 13/50 (26%), Positives = 22/50 (44%)
 Frame = +3

Query: 315 KSPTRSEPTSRRNSTVKSSLPAEIITVKDFFDFMKTAYQVYEYLEGDEDD 464
           KS   ++P   R+    + L  E    +D     + +  + + LEG EDD
Sbjct: 80  KSKRSAQPEGPRDQGATAELEIETEKDRDAQAIYQKSIDINKELEGKEDD 129


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 13/50 (26%), Positives = 22/50 (44%)
 Frame = +3

Query: 315 KSPTRSEPTSRRNSTVKSSLPAEIITVKDFFDFMKTAYQVYEYLEGDEDD 464
           KS   ++P   R+    + L  E    +D     + +  + + LEG EDD
Sbjct: 80  KSKRSAQPEGPRDQGATAELEIETEKDRDAQAIYQKSIDINKELEGKEDD 129


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1

Query: 229 YHNWDRNYE 203
           Y+NWD NYE
Sbjct: 119 YNNWDGNYE 127


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 512,028
Number of Sequences: 2352
Number of extensions: 7700
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)