Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20j02
         (607 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74040-2|CAA98513.1|  287|Caenorhabditis elegans Hypothetical pr...    31   0.64 
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a...    30   1.5  
Z74040-1|CAA98514.2|  340|Caenorhabditis elegans Hypothetical pr...    29   2.6  
U50312-10|AAY86208.1|  356|Caenorhabditis elegans Hypothetical p...    29   3.4  
AL032655-7|CAH60798.1|  329|Caenorhabditis elegans Hypothetical ...    29   3.4  
Z92809-4|CAI06053.1|  615|Caenorhabditis elegans Hypothetical pr...    28   4.5  
AM748822-1|CAO72176.1|  591|Caenorhabditis elegans hexosaminidas...    28   4.5  
AL023839-4|CAA19506.2|  615|Caenorhabditis elegans Hypothetical ...    28   4.5  
AL031630-11|CAA21001.1|  334|Caenorhabditis elegans Hypothetical...    27   7.9  

>Z74040-2|CAA98513.1|  287|Caenorhabditis elegans Hypothetical
           protein K10D6.2b protein.
          Length = 287

 Score = 31.1 bits (67), Expect = 0.64
 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
 Frame = +3

Query: 411 FMKTAYQVYEYLEGDEDDGSK---IDWEELTKLTVL--NHVIEQQERDLLLQTAFSEQK 572
           F+ T    Y+++ GDE+DGSK     W++ T+   L  N +  ++E  LL     S Q+
Sbjct: 205 FVCTLLTTYKFVTGDEEDGSKENLFTWQQQTQPVTLSVNELPYRREEPLLHDKFVSSQQ 263


>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
            assigned gene nameprotein 192 protein.
          Length = 2957

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = -1

Query: 313  ELLTLLMNIEDKSISGLGLAILMFYTKNYHNWDRNYEKWIDQTSLGY 173
            + +T L  I D  I G  L ++   T    NW R +E W D  ++ Y
Sbjct: 1221 QTITFLSRIYDYGIHGPFLVVVPLST--IQNWVREFETWTDMNAIVY 1265


>Z74040-1|CAA98514.2|  340|Caenorhabditis elegans Hypothetical
           protein K10D6.2a protein.
          Length = 340

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
 Frame = +3

Query: 411 FMKTAYQVYEYLEGDEDDGSK---IDWEELTKLTVLN 512
           F+ T    Y+++ GDE+DGSK     W++ T+   L+
Sbjct: 205 FVCTLLTTYKFVTGDEEDGSKENLFTWQQQTQPVTLS 241


>U50312-10|AAY86208.1|  356|Caenorhabditis elegans Hypothetical
           protein B0222.11 protein.
          Length = 356

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
 Frame = +3

Query: 396 KDFFDFMKTAYQVYE--YLEGDEDDGSKIDWEELTKLTVLNHVIEQQERDLLLQTAFSEQ 569
           K  ++  K A Q Y+  Y+E DED+     W+ L      N + +  +RD+   TA S+ 
Sbjct: 152 KGVYEKKKKAKQHYDWDYVEYDEDEDDDYFWDGLFWKKKRNVLKKIVKRDVEATTAISQP 211

Query: 570 KPITSKSETAL 602
              T+ + T +
Sbjct: 212 PNSTAMNSTGI 222


>AL032655-7|CAH60798.1|  329|Caenorhabditis elegans Hypothetical
           protein Y6B3B.12 protein.
          Length = 329

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 252 MASPNPEIDLSSMFISKVNNSKSPT 326
           M+SPNP + +SS+    V N+  PT
Sbjct: 107 MSSPNPALPISSIIAEAVKNASPPT 131


>Z92809-4|CAI06053.1|  615|Caenorhabditis elegans Hypothetical
           protein Y39A1C.4 protein.
          Length = 615

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 9/26 (34%), Positives = 19/26 (73%)
 Frame = -1

Query: 241 YTKNYHNWDRNYEKWIDQTSLGYQDY 164
           Y+ N +++ +N+E WI Q ++ Y+D+
Sbjct: 365 YSTNANHYLKNHESWIKQFTMVYKDF 390


>AM748822-1|CAO72176.1|  591|Caenorhabditis elegans hexosaminidase
           protein.
          Length = 591

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 9/26 (34%), Positives = 19/26 (73%)
 Frame = -1

Query: 241 YTKNYHNWDRNYEKWIDQTSLGYQDY 164
           Y+ N +++ +N+E WI Q ++ Y+D+
Sbjct: 365 YSTNANHYLKNHESWIKQFTMVYKDF 390


>AL023839-4|CAA19506.2|  615|Caenorhabditis elegans Hypothetical
           protein Y39A1C.4 protein.
          Length = 615

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 9/26 (34%), Positives = 19/26 (73%)
 Frame = -1

Query: 241 YTKNYHNWDRNYEKWIDQTSLGYQDY 164
           Y+ N +++ +N+E WI Q ++ Y+D+
Sbjct: 365 YSTNANHYLKNHESWIKQFTMVYKDF 390


>AL031630-11|CAA21001.1|  334|Caenorhabditis elegans Hypothetical
           protein Y38H6C.12 protein.
          Length = 334

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -1

Query: 274 ISGLGLAILMFYTKNYHNWDRN 209
           I  +G+AILMF+ + YH   RN
Sbjct: 105 IGVIGMAILMFFEERYHKLIRN 126


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,440,687
Number of Sequences: 27780
Number of extensions: 205016
Number of successful extensions: 596
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 596
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)