Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20i22
(699 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II lar... 26 0.30
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 26 0.40
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 26 0.40
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 26 0.40
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 23 2.8
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 23 3.7
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 22 4.9
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 4.9
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 22 4.9
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 21 8.5
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 8.5
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 8.5
>DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II large
subunit protein.
Length = 296
Score = 26.2 bits (55), Expect = 0.30
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +3
Query: 288 SFTIPRMYVCVRMRNI--KYNSYEWRKRTGIHFVADD 392
+ I ++ CV +N+ K + +RKRT HF+ DD
Sbjct: 239 NINISQVIACVGQQNVEGKRIPFGFRKRTLPHFIKDD 275
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 25.8 bits (54), Expect = 0.40
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 672 HSRYMLYANHYNENFNFTCRNLYNQ 598
+S Y Y N+YN N+N N Y +
Sbjct: 91 YSNYNNYNNNYNNNYNNNYNNNYKK 115
Score = 23.4 bits (48), Expect = 2.1
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 654 YANHYNENFNFTCRNLY 604
Y N+YN N+N + LY
Sbjct: 101 YNNNYNNNYNNNYKKLY 117
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 25.8 bits (54), Expect = 0.40
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 672 HSRYMLYANHYNENFNFTCRNLYNQ 598
+S Y Y N+YN N+N N Y +
Sbjct: 91 YSNYNNYNNNYNNNYNNNYNNNYKK 115
Score = 23.4 bits (48), Expect = 2.1
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 654 YANHYNENFNFTCRNLY 604
Y N+YN N+N + LY
Sbjct: 101 YNNNYNNNYNNNYKKLY 117
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 25.8 bits (54), Expect = 0.40
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 648 NHYNENFNFTCRNLY 604
N+YN N+N C+ LY
Sbjct: 341 NNYNNNYNNNCKKLY 355
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 2.8
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -1
Query: 684 IPQLHSRYMLYANHYNENFNFTCRNLY 604
I L ++ + N+Y N+N C+ LY
Sbjct: 82 ISSLSNKTIHNNNNYKYNYNNNCKKLY 108
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 22.6 bits (46), Expect = 3.7
Identities = 7/21 (33%), Positives = 16/21 (76%)
Frame = -2
Query: 614 EICITNELQVNREPVSTHDDK 552
E+CI +++ V+ E + ++D+K
Sbjct: 1240 EVCIGSQIMVSPETLLSYDEK 1260
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 22.2 bits (45), Expect = 4.9
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = -1
Query: 684 IPQLHSRYMLYANHYNENFNFTCRNLYN 601
I L + Y+ ++YN N N+ + YN
Sbjct: 82 ISSLSNNYISNISNYNNNNNYNKKLYYN 109
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 22.2 bits (45), Expect = 4.9
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -1
Query: 675 LHSRYMLYANHYNENFNFTCRNLYN 601
+H+ N+YN N+N N YN
Sbjct: 323 IHNNNNYNNNNYNNNYNNYNNNNYN 347
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 22.2 bits (45), Expect = 4.9
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = -1
Query: 684 IPQLHSRYMLYANHYNENFNFTCRNLYN 601
I L + Y+ ++YN N N+ + YN
Sbjct: 320 ISSLSNNYISNISNYNNNNNYNKKLYYN 347
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 21.4 bits (43), Expect = 8.5
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -1
Query: 60 DHIPIKYKLILSNE*NV 10
DH P +YK+ + +E NV
Sbjct: 514 DHQPYQYKIAVHSEQNV 530
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.4 bits (43), Expect = 8.5
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -1
Query: 684 IPQLHSRYMLYANHYNENFNFTCRNLYN 601
I L + Y Y+N+ N N N+ N YN
Sbjct: 315 ISSLSNNYK-YSNYNNYNNNYNNYNNYN 341
Score = 21.4 bits (43), Expect = 8.5
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 648 NHYNENFNFTCRNLY 604
N+YN N+N + LY
Sbjct: 338 NNYNNNYNNNYKKLY 352
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.4 bits (43), Expect = 8.5
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +2
Query: 443 FALPSGYGFGRCNENTVTL 499
F +P+G +GRC + L
Sbjct: 546 FGIPTGTLYGRCKREGIEL 564
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,919
Number of Sequences: 438
Number of extensions: 4443
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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