BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20i19
(363 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT022385-1|AAY54801.1| 124|Drosophila melanogaster IP05263p pro... 28 4.2
AE014296-2343|AAF49771.3| 2294|Drosophila melanogaster CG32133-P... 27 7.4
>BT022385-1|AAY54801.1| 124|Drosophila melanogaster IP05263p
protein.
Length = 124
Score = 27.9 bits (59), Expect = 4.2
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -3
Query: 172 CYSGSSCGPLCNCHGWCCFILLSFFG 95
C SGS CGP +C C L S G
Sbjct: 56 CKSGSCCGPCGSCSNGCAACLSSCCG 81
>AE014296-2343|AAF49771.3| 2294|Drosophila melanogaster CG32133-PA
protein.
Length = 2294
Score = 27.1 bits (57), Expect = 7.4
Identities = 14/37 (37%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +3
Query: 84 PNPLPKKLRRMKQHHP*QL-QRGPQELPE*HPIKLLQ 191
P+P P + +++ Q HP Q+ Q+ PQ+L + HP ++ Q
Sbjct: 409 PHPQPLQ-QQLAQQHPQQIAQQLPQQLSQQHPQQIPQ 444
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,280,558
Number of Sequences: 53049
Number of extensions: 181490
Number of successful extensions: 527
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 527
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 922092336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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