Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20i12
         (722 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC046111-1|AAH46111.1|  395|Homo sapiens chromosome 4 open readi...    33   1.4  
AK057459-1|BAB71497.1|  395|Homo sapiens protein ( Homo sapiens ...    33   1.4  
AF380838-1|AAK57455.1|  395|Homo sapiens testis development prot...    33   1.4  
AK123191-1|BAC85553.1|  221|Homo sapiens protein ( Homo sapiens ...    30   9.6  

>BC046111-1|AAH46111.1|  395|Homo sapiens chromosome 4 open reading
           frame 35 protein.
          Length = 395

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +1

Query: 586 SSNLVPVTDQYVLPEGDSNLFTNNYLLQTDYSTNND 693
           + N +P ++  +  EGD     N Y+L++D+ST  D
Sbjct: 30  ADNAIPKSETTITSEGDHVTSVNEYMLESDFSTTTD 65


>AK057459-1|BAB71497.1|  395|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32897 fis, clone TESTI2005268, moderately
           similar to Rattus norvegicus RSD-6 mRNA. ).
          Length = 395

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +1

Query: 586 SSNLVPVTDQYVLPEGDSNLFTNNYLLQTDYSTNND 693
           + N +P ++  +  EGD     N Y+L++D+ST  D
Sbjct: 30  ADNAIPKSETTITSEGDHVTSVNEYMLESDFSTTTD 65


>AF380838-1|AAK57455.1|  395|Homo sapiens testis development protein
           NYD-SP26 protein.
          Length = 395

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +1

Query: 586 SSNLVPVTDQYVLPEGDSNLFTNNYLLQTDYSTNND 693
           + N +P ++  +  EGD     N Y+L++D+ST  D
Sbjct: 30  ADNAIPKSETTITSEGDHVTSVNEYMLESDFSTTTD 65


>AK123191-1|BAC85553.1|  221|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41197 fis, clone BRACE2045947. ).
          Length = 221

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 15/46 (32%), Positives = 21/46 (45%)
 Frame = -2

Query: 601 GQDWKNYPHSQKTVQIQFHKLSKILANSLFLDPPLHTEFVSILGMF 464
           G+ W   PHS++T +   +     L N L    P HT  +   GMF
Sbjct: 174 GRGWSESPHSRETHRSPLNFADAHLENGLSCTRPSHTTALQADGMF 219


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,648,810
Number of Sequences: 237096
Number of extensions: 1980841
Number of successful extensions: 3382
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3378
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)