Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20i07
         (251 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0502 + 18826595-18826660,18826815-18826885,18828963-188290...    26   3.7  
07_03_1102 - 23981362-23982219                                         26   4.8  

>07_03_0502 +
           18826595-18826660,18826815-18826885,18828963-18829056,
           18829575-18831521
          Length = 725

 Score = 26.2 bits (55), Expect = 3.7
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = +2

Query: 23  SYHNVLLPGTVMKTSRFSGHPCNFANRLINGCSLFQHEELRA*RDLTVSLA 175
           +YH  +    V  +S  SGH  + A +L+  C++ Q  ++ A +  T SLA
Sbjct: 362 AYHLAVSLANVNSSSSSSGHDLSKAWKLVWNCNIPQKVKIFAWKAATNSLA 412


>07_03_1102 - 23981362-23982219
          Length = 285

 Score = 25.8 bits (54), Expect = 4.8
 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = -3

Query: 180 AKARETVRSRYALSSSC*KSEHPFINLFAKLQGCPENRDVF--ITVPGS 40
           AK   +  +R+  +S+    +HP + LF    GC  + DV   +T+P +
Sbjct: 200 AKVGSSRSARFEPASTAADKKHPVVGLFGDSFGCKCSPDVVEPVTLPAA 248


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,113,223
Number of Sequences: 37544
Number of extensions: 96205
Number of successful extensions: 204
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 204
length of database: 14,793,348
effective HSP length: 62
effective length of database: 12,465,620
effective search space used: 261778020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)