Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20i07
(251 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF078787-4|AAC26952.2| 274|Caenorhabditis elegans Hypothetical ... 26 4.1
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z78066-7|CAE48544.1| 570|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z77133-4|CAB00867.3| 232|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z70754-3|CAA94773.1| 293|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z30317-2|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical pr... 25 9.4
U80955-3|AAM97944.1| 95|Caenorhabditis elegans Mlp/crp family ... 25 9.4
U80955-1|AAM97945.1| 113|Caenorhabditis elegans Mlp/crp family ... 25 9.4
AY205144-1|AAO46042.2| 201|Caenorhabditis elegans NK-2 family h... 25 9.4
>AF078787-4|AAC26952.2| 274|Caenorhabditis elegans Hypothetical
protein T17A3.6 protein.
Length = 274
Score = 25.8 bits (54), Expect = 4.1
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 20 ISYHNVLLPGTVMKTSRFSGHPCNFANRLINGCSLFQHEELRA*RDL 160
+SY V KT F P F R ++ CS+F E+L+ RD+
Sbjct: 70 LSYMKVKKGPIAEKTKVFYWKPPGFTFRTVHVCSIFM-EDLKFHRDI 115
>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical protein
W06A7.3f protein.
Length = 2488
Score = 24.6 bits (51), Expect = 9.4
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -1
Query: 215 SINKLHDEIHTLLRRE 168
+++K+HDE+ LRRE
Sbjct: 2121 TVDKVHDEVDNFLRRE 2136
>Z78066-7|CAE48544.1| 570|Caenorhabditis elegans Hypothetical
protein W06A7.3d protein.
Length = 570
Score = 24.6 bits (51), Expect = 9.4
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -1
Query: 215 SINKLHDEIHTLLRRE 168
+++K+HDE+ LRRE
Sbjct: 207 TVDKVHDEVDNFLRRE 222
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical protein
W06A7.3c protein.
Length = 2484
Score = 24.6 bits (51), Expect = 9.4
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -1
Query: 215 SINKLHDEIHTLLRRE 168
+++K+HDE+ LRRE
Sbjct: 2121 TVDKVHDEVDNFLRRE 2136
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical protein
W06A7.3a protein.
Length = 2607
Score = 24.6 bits (51), Expect = 9.4
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -1
Query: 215 SINKLHDEIHTLLRRE 168
+++K+HDE+ LRRE
Sbjct: 2121 TVDKVHDEVDNFLRRE 2136
>Z77133-4|CAB00867.3| 232|Caenorhabditis elegans Hypothetical
protein K03A11.3 protein.
Length = 232
Score = 24.6 bits (51), Expect = 9.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 20 ISYHNVLLPGTVMKTSRFSGHPCNFANRLINGCSLFQ 130
IS V+LP V++ + S P F N L + +LF+
Sbjct: 37 ISSTTVILPSEVIQPPQQSAVPSEFKNTLPSRLNLFE 73
>Z70754-3|CAA94773.1| 293|Caenorhabditis elegans Hypothetical
protein F58E6.3 protein.
Length = 293
Score = 24.6 bits (51), Expect = 9.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 35 VLLPGTVMKTSRFSGHPCNF 94
+ PGT++ S F PC+F
Sbjct: 157 ICFPGTILDHSTFKCEPCDF 176
>Z30317-2|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical
protein T16G12.5 protein.
Length = 1142
Score = 24.6 bits (51), Expect = 9.4
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +1
Query: 7 NLFCHFVSQCLTTRHSNEDVTIFGTSL*FREQINKRV 117
N+F ++V + T N ++T+F L F E ++K++
Sbjct: 496 NVFINYVEELHTRFALNANLTVFDKILNFWEVLDKKI 532
>U80955-3|AAM97944.1| 95|Caenorhabditis elegans Mlp/crp family
(muscle lim protein/cysteine-rich protein) protein 1,
isoform a protein.
Length = 95
Score = 24.6 bits (51), Expect = 9.4
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = +2
Query: 86 CNFANRLINGCSLFQHE 136
CN N+L++ C++ HE
Sbjct: 38 CNMCNKLLDSCTVAPHE 54
>U80955-1|AAM97945.1| 113|Caenorhabditis elegans Mlp/crp family
(muscle lim protein/cysteine-rich protein) protein 1,
isoform b protein.
Length = 113
Score = 24.6 bits (51), Expect = 9.4
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = +2
Query: 86 CNFANRLINGCSLFQHE 136
CN N+L++ C++ HE
Sbjct: 38 CNMCNKLLDSCTVAPHE 54
>AY205144-1|AAO46042.2| 201|Caenorhabditis elegans NK-2 family
homeodomain proteinCEH-28 protein.
Length = 201
Score = 24.6 bits (51), Expect = 9.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 20 ISYHNVLLPGTVMKTSRFSGHPCNFANRLINGCSLFQ 130
IS V+LP V++ + S P F N L + +LF+
Sbjct: 6 ISSTTVILPSEVIQPPQQSAVPSEFKNTLPSRLNLFE 42
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,828,794
Number of Sequences: 27780
Number of extensions: 99612
Number of successful extensions: 248
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 248
length of database: 12,740,198
effective HSP length: 63
effective length of database: 10,990,058
effective search space used: 219801160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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