Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20i05
(633 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92838-5|CAB07404.2| 578|Caenorhabditis elegans Hypothetical pr... 123 1e-28
AC006624-7|AAF39787.1| 642|Caenorhabditis elegans Hypothetical ... 120 7e-28
AF068719-3|AAM45352.1| 603|Caenorhabditis elegans Hypothetical ... 114 4e-26
AF068719-2|AAC17783.1| 633|Caenorhabditis elegans Hypothetical ... 114 4e-26
Z99284-1|CAB16541.2| 607|Caenorhabditis elegans Hypothetical pr... 100 7e-22
U97009-3|AAC69031.1| 619|Caenorhabditis elegans Hypothetical pr... 83 2e-16
AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical ... 71 5e-13
AC024880-1|AAR12985.1| 634|Caenorhabditis elegans Hypothetical ... 71 5e-13
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 30 1.2
U80955-5|AAG01559.2| 573|Caenorhabditis elegans Ferm domain (pr... 29 3.7
U80955-4|ABB51180.1| 589|Caenorhabditis elegans Ferm domain (pr... 29 3.7
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 29 3.7
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 28 6.4
AC026301-13|AAP13737.1| 766|Caenorhabditis elegans Hypothetical... 28 6.4
AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical ... 28 6.4
AC006731-1|AAF60483.1| 4900|Caenorhabditis elegans Temporarily a... 28 6.4
Z69646-7|CAA93471.3| 1484|Caenorhabditis elegans Hypothetical pr... 27 8.4
U29536-2|AAA68790.1| 759|Caenorhabditis elegans Brf (transcript... 27 8.4
AL110485-29|CAB60376.3| 732|Caenorhabditis elegans Hypothetical... 27 8.4
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 27 8.4
AC006762-4|AAU20835.1| 484|Caenorhabditis elegans Hypothetical ... 27 8.4
AC006762-3|AAU20834.1| 614|Caenorhabditis elegans Hypothetical ... 27 8.4
AC006762-2|AAF60558.2| 607|Caenorhabditis elegans Hypothetical ... 27 8.4
AC006762-1|AAU87813.1| 514|Caenorhabditis elegans Hypothetical ... 27 8.4
>Z92838-5|CAB07404.2| 578|Caenorhabditis elegans Hypothetical
protein T03D8.6 protein.
Length = 578
Score = 123 bits (296), Expect = 1e-28
Identities = 57/141 (40%), Positives = 94/141 (66%), Gaps = 4/141 (2%)
Frame = +1
Query: 217 RYQRAAVAANGHECATVGREILEKNGSAVDAAIATLFCEGISCAQCMGLGGGFLATVYDA 396
++++AA+ ++ C+ +G EIL K G+++DA+IA++FC G+ Q G+GGGFL T +D
Sbjct: 34 KFEKAALTSDNAACSKIGGEILRKGGNSIDASIASMFCLGVVNPQSSGIGGGFLMTYFDQ 93
Query: 397 STGRVRVLNARERAPAAMTLNMYENAS--STVGGLAIAVPGELRGYGALYQEY--GRLPW 564
+G ++ARE APAA + +M+ N S S G A PGE+ GY +++++ G++ W
Sbjct: 94 KSGDCYSIDARETAPAAASRDMFLNDSDGSKYGFKAAGTPGEIAGYWHIFKKFGSGKVTW 153
Query: 565 RELVQPTAELCRRGHRVTEYM 627
+ELVQP+ +L R GH V+ Y+
Sbjct: 154 KELVQPSVKLAREGHPVSPYL 174
>AC006624-7|AAF39787.1| 642|Caenorhabditis elegans Hypothetical
protein C53D5.5 protein.
Length = 642
Score = 120 bits (290), Expect = 7e-28
Identities = 60/143 (41%), Positives = 89/143 (62%), Gaps = 4/143 (2%)
Frame = +1
Query: 217 RYQRAAVAANGHECATVGREILEKNGSAVDAAIATLFCEGISCAQCMGLGGGFLATVYDA 396
+Y +AAVAA+ C+ +GR IL K G+AVD+AIA LFC G+ G+GGG T+Y+A
Sbjct: 100 KYSKAAVAADNEICSEIGRNILLKGGNAVDSAIAALFCIGVMDTHSAGIGGGHFMTIYNA 159
Query: 397 STGRVRVLNARERAPAAMTLNMYENA--SSTVGGLAIAVPGELRGYGALYQEY--GRLPW 564
+T V++ARE AP A T MY + S +G AIAVPGEL G ++ + G++ W
Sbjct: 160 TTKECTVIDAREIAPLAATEEMYRDKWNQSRIGWKAIAVPGELHGLRTEFERFGSGKVEW 219
Query: 565 RELVQPTAELCRRGHRVTEYMGR 633
R+L++PT +L G+ + + +
Sbjct: 220 RQLLKPTIDLLAEGYPTSHALAK 242
>AF068719-3|AAM45352.1| 603|Caenorhabditis elegans Hypothetical
protein H14N18.4b protein.
Length = 603
Score = 114 bits (275), Expect = 4e-26
Identities = 60/144 (41%), Positives = 89/144 (61%), Gaps = 4/144 (2%)
Frame = +1
Query: 199 TGSQHVRYQRAAVAANGHECATVGREILEKNGSAVDAAIATLFCEGISCAQCMGLGGGFL 378
+GS Y++AAV ++ C+ +GR++L + G+AVDA IA+L C G Q G+GGGF+
Sbjct: 65 SGSLFAHYKKAAVTSDHGLCSEIGRDVLIEGGNAVDAMIASLLCIGTVNPQSSGIGGGFV 124
Query: 379 ATVYDASTGRVRVLNARERAPAAMTLNMY-ENASSTVGGL-AIAVPGELRGYGALYQEY- 549
T+Y+ASTG + +NARE APAA T M+ +N +V G +IA P EL G+ ++ Y
Sbjct: 125 MTLYNASTGMCQTINARETAPAAATETMFVDNPKESVMGYKSIATPSELHGFWTVFNMYG 184
Query: 550 -GRLPWRELVQPTAELCRRGHRVT 618
G++ W L QP+ L G V+
Sbjct: 185 SGKVSWARLFQPSITLAHDGFPVS 208
>AF068719-2|AAC17783.1| 633|Caenorhabditis elegans Hypothetical
protein H14N18.4a protein.
Length = 633
Score = 114 bits (275), Expect = 4e-26
Identities = 60/144 (41%), Positives = 89/144 (61%), Gaps = 4/144 (2%)
Frame = +1
Query: 199 TGSQHVRYQRAAVAANGHECATVGREILEKNGSAVDAAIATLFCEGISCAQCMGLGGGFL 378
+GS Y++AAV ++ C+ +GR++L + G+AVDA IA+L C G Q G+GGGF+
Sbjct: 95 SGSLFAHYKKAAVTSDHGLCSEIGRDVLIEGGNAVDAMIASLLCIGTVNPQSSGIGGGFV 154
Query: 379 ATVYDASTGRVRVLNARERAPAAMTLNMY-ENASSTVGGL-AIAVPGELRGYGALYQEY- 549
T+Y+ASTG + +NARE APAA T M+ +N +V G +IA P EL G+ ++ Y
Sbjct: 155 MTLYNASTGMCQTINARETAPAAATETMFVDNPKESVMGYKSIATPSELHGFWTVFNMYG 214
Query: 550 -GRLPWRELVQPTAELCRRGHRVT 618
G++ W L QP+ L G V+
Sbjct: 215 SGKVSWARLFQPSITLAHDGFPVS 238
>Z99284-1|CAB16541.2| 607|Caenorhabditis elegans Hypothetical
protein Y7A9A.1 protein.
Length = 607
Score = 100 bits (240), Expect = 7e-22
Identities = 51/136 (37%), Positives = 75/136 (55%), Gaps = 4/136 (2%)
Frame = +1
Query: 205 SQHVRYQRAAVAANGHECATVGREILEKNGSAVDAAIATLFCEGISCAQCMGLGGGFLAT 384
S+ ++ AA A+ CA + R ++ + G+AVDAAIA FC G+ G+GGG
Sbjct: 65 SKSAIFKNAAAVADSRFCAEIARNVIIQGGNAVDAAIAATFCNGVVLPYATGIGGGDFIV 124
Query: 385 VYDASTGRVRVLNARERAPAAMTLNMY--ENASSTVGGLAIAVPGELRGYGALYQEYGR- 555
+Y + LN+RE AP+ T MY + S+ G +I +PGEL G YQ+YG
Sbjct: 125 IYLKEEKKCVFLNSRETAPSLATEKMYVHDKDSAQFGYQSIGIPGELHGLWTAYQKYGSK 184
Query: 556 -LPWRELVQPTAELCR 600
+PW +LV P A+L +
Sbjct: 185 VIPWSDLVMPAAQLAK 200
>U97009-3|AAC69031.1| 619|Caenorhabditis elegans Hypothetical
protein T19H12.6 protein.
Length = 619
Score = 82.6 bits (195), Expect = 2e-16
Identities = 49/136 (36%), Positives = 73/136 (53%), Gaps = 4/136 (2%)
Frame = +1
Query: 226 RAAVAANGHECATVGREILEKNGSAVDAAIATLFCEGISCAQCMGLGGGFLATVYDASTG 405
RAAV + EC+ +G+ IL + G+AV+AAIA FC + LGGG + TV G
Sbjct: 221 RAAVFTSSAECSAIGKSILVRGGNAVEAAIAASFCLMGAMPNKASLGGGLMMTV-KTKNG 279
Query: 406 RVRVLNARERAPAAMTLN-MYENASST-VGGLAIAVPGELRGYGALYQEY--GRLPWREL 573
+ ARE AP ++ + +N T VG A PG L G +Q++ R+ W+ L
Sbjct: 280 NATTIIARETAPMNADIDELKKNPELTHVGPKASGTPGTLNGLYRAFQKFSSNRVQWKHL 339
Query: 574 VQPTAELCRRGHRVTE 621
V PT + C +G +++E
Sbjct: 340 VLPTIQQCNKGFKLSE 355
>AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical
protein Y97E10AR.2a protein.
Length = 665
Score = 71.3 bits (167), Expect = 5e-13
Identities = 39/148 (26%), Positives = 75/148 (50%), Gaps = 5/148 (3%)
Frame = +1
Query: 205 SQHVRYQRAAVAANGHECATVGREILEKNGSAVDAAIATLFCEGISCAQCMGLGGGFLAT 384
S ++ + A+ ++ +C+ +G++I E G+AVDA +AT FC G G G +
Sbjct: 309 SSSEKFSKFAIISHHEDCSEIGKKIHETGGNAVDAMVATEFCISAVHPHTTGPGFGAVIV 368
Query: 385 VYDASTGRVRVLNARERAPAAMTLNMY--ENASSTVGGLAIAVPGELRGYGALYQEY--G 552
++ V++ RERAP N + + +G ++ VPG + Y+++ G
Sbjct: 369 LHSKKKNGTFVIDGRERAPKNANKNTFVINPTIAHIGYSSMGVPGWISVLWTAYKQFGSG 428
Query: 553 RLPWRELVQPTAELCRRGH-RVTEYMGR 633
++ W+ L++PT EL + R+ +G+
Sbjct: 429 KIVWKSLIEPTIELLKTNRVRIDRLLGQ 456
>AC024880-1|AAR12985.1| 634|Caenorhabditis elegans Hypothetical
protein Y97E10AR.2b protein.
Length = 634
Score = 71.3 bits (167), Expect = 5e-13
Identities = 39/148 (26%), Positives = 75/148 (50%), Gaps = 5/148 (3%)
Frame = +1
Query: 205 SQHVRYQRAAVAANGHECATVGREILEKNGSAVDAAIATLFCEGISCAQCMGLGGGFLAT 384
S ++ + A+ ++ +C+ +G++I E G+AVDA +AT FC G G G +
Sbjct: 259 SSSEKFSKFAIISHHEDCSEIGKKIHETGGNAVDAMVATEFCISAVHPHTTGPGFGAVIV 318
Query: 385 VYDASTGRVRVLNARERAPAAMTLNMY--ENASSTVGGLAIAVPGELRGYGALYQEY--G 552
++ V++ RERAP N + + +G ++ VPG + Y+++ G
Sbjct: 319 LHSKKKNGTFVIDGRERAPKNANKNTFVINPTIAHIGYSSMGVPGWISVLWTAYKQFGSG 378
Query: 553 RLPWRELVQPTAELCRRGH-RVTEYMGR 633
++ W+ L++PT EL + R+ +G+
Sbjct: 379 KIVWKSLIEPTIELLKTNRVRIDRLLGQ 406
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 30.3 bits (65), Expect = 1.2
Identities = 26/126 (20%), Positives = 47/126 (37%)
Frame = -2
Query: 506 TAIASPPTVDDAFSYMFRVMAAGARSLALSTLTRPVLASYTVARNPPPSPMHCAQDIPSQ 327
T + +PPT Y ++ + ++ T P T PP +P P+
Sbjct: 456 TVVLAPPTTPGPTFYPVTTVSTMSPPTTVTVPTTPTPVP-TTTNTPPANPTTAT---PTT 511
Query: 326 NNVAIAASTAEPFFSSISLPTVAHSCPLXXXXXXXXXXXCEPVHGCSTSTAISAPINTTD 147
+ +T P S+I+ ++ S P P H ++ + P+ TT+
Sbjct: 512 VGTSKQTNTISPHLSTIT-GSIVTSTPTMAPQTSASPTTT-PTHTTASQPTTTKPVVTTN 569
Query: 146 NTLPST 129
+ PST
Sbjct: 570 SVTPST 575
Score = 28.7 bits (61), Expect = 3.7
Identities = 24/98 (24%), Positives = 38/98 (38%)
Frame = -2
Query: 422 LSTLTRPVLASYTVARNPPPSPMHCAQDIPSQNNVAIAASTAEPFFSSISLPTVAHSCPL 243
L+TLT P + T PS P+ VA ++ P ++ PT+A + P
Sbjct: 628 LTTLTTPTVPVTTTV---VPSSATVPTTPPTTVTVAATTTSKAPVVTTS--PTLAPTSPT 682
Query: 242 XXXXXXXXXXXCEPVHGCSTSTAISAPINTTDNTLPST 129
P + +T +AP+N T +T T
Sbjct: 683 KLPTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTTAPT 720
Score = 27.5 bits (58), Expect = 8.4
Identities = 26/97 (26%), Positives = 37/97 (38%), Gaps = 2/97 (2%)
Frame = -2
Query: 413 LTRPVLASYTVARNPPPSPMHCAQDIPSQNNVAIAASTAEPFFSSISLPTVAHSC--PLX 240
+T V+ S PP+ + A S+ V + T P S LPT S
Sbjct: 638 VTTTVVPSSATVPTTPPTTVTVAATTTSKAPVVTTSPTLAPT-SPTKLPTSPPSTVGTSP 696
Query: 239 XXXXXXXXXXCEPVHGCSTSTAISAPINTTDNTLPST 129
PV+ S++TA +AP+N T T T
Sbjct: 697 TAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPT 733
>U80955-5|AAG01559.2| 573|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 2,
isoform a protein.
Length = 573
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -2
Query: 419 STLTRPVLASYTVARNPPPSPMHCAQD-IPSQNNVAIAASTAEPFFSSISLPT 264
S + RPV+++ T +PPP P H + IP ++ + +++P ++ + T
Sbjct: 488 SYIPRPVVSTSTSFSHPPPLPAHQSNSKIPRMSSASEQRKSSQPPQPAVRMQT 540
>U80955-4|ABB51180.1| 589|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 2,
isoform b protein.
Length = 589
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -2
Query: 419 STLTRPVLASYTVARNPPPSPMHCAQD-IPSQNNVAIAASTAEPFFSSISLPT 264
S + RPV+++ T +PPP P H + IP ++ + +++P ++ + T
Sbjct: 504 SYIPRPVVSTSTSFSHPPPLPAHQSNSKIPRMSSASEQRKSSQPPQPAVRMQT 556
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 28.7 bits (61), Expect = 3.7
Identities = 24/98 (24%), Positives = 38/98 (38%)
Frame = -2
Query: 422 LSTLTRPVLASYTVARNPPPSPMHCAQDIPSQNNVAIAASTAEPFFSSISLPTVAHSCPL 243
L+TLT P + T PS P+ VA ++ P ++ PT+A + P
Sbjct: 572 LTTLTTPTVPVTTTV---VPSSATVPTTPPTTVTVAATTTSKAPVVTTS--PTLAPTSPT 626
Query: 242 XXXXXXXXXXXCEPVHGCSTSTAISAPINTTDNTLPST 129
P + +T +AP+N T +T T
Sbjct: 627 KLPTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTTAPT 664
Score = 27.5 bits (58), Expect = 8.4
Identities = 26/97 (26%), Positives = 37/97 (38%), Gaps = 2/97 (2%)
Frame = -2
Query: 413 LTRPVLASYTVARNPPPSPMHCAQDIPSQNNVAIAASTAEPFFSSISLPTVAHSC--PLX 240
+T V+ S PP+ + A S+ V + T P S LPT S
Sbjct: 582 VTTTVVPSSATVPTTPPTTVTVAATTTSKAPVVTTSPTLAPT-SPTKLPTSPPSTVGTSP 640
Query: 239 XXXXXXXXXXCEPVHGCSTSTAISAPINTTDNTLPST 129
PV+ S++TA +AP+N T T T
Sbjct: 641 TAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPT 677
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical
protein F45E4.4 protein.
Length = 2361
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/68 (20%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = -2
Query: 491 PPTVDDAFSYMFRVMAAGARSLALSTLTRPVLASYTVARNPPPSPMHCAQDIPSQ--NNV 318
P + ++ ++ A A+ + L R + ++ PPP H QD+ + +++
Sbjct: 787 PELTQEELDHIAKITAMAAQDVQLPATQRSITHKVSLTPPPPPPSKHFEQDLTQEELDHI 846
Query: 317 AIAASTAE 294
A A A+
Sbjct: 847 ARIAEMAD 854
>AC026301-13|AAP13737.1| 766|Caenorhabditis elegans Hypothetical
protein Y54F10BM.1 protein.
Length = 766
Score = 27.9 bits (59), Expect = 6.4
Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 4/76 (5%)
Frame = -2
Query: 518 SSPGTAIASPPTVDDAFSYMFRVMAAGARSLALSTLTRPVLASYTVARN----PPPSPMH 351
++PG A S + + R A GA S + L + + R PPP+P
Sbjct: 633 AAPGAASLSTEKLTQSSRKRARTCAVGAASGVTPVVASLTLQDHQLLRPHTHAPPPTPSR 692
Query: 350 CAQDIPSQNNVAIAAS 303
A PS I++S
Sbjct: 693 SAPSSPSSKKCEISSS 708
>AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical
protein Y41D4B.18 protein.
Length = 338
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = -2
Query: 206 EPVHGCSTSTAISAPINTTDNTLPSTQNRRRLSQNYNIVL*RKIISKTNLSIL 48
+PV ++ST+ AP N + P+T ++ SQN + + +SI+
Sbjct: 276 QPVSSSTSSTSSPAPTNPPTTSRPTTASQSTASQNVETTTKLGLTASITVSIM 328
>AC006731-1|AAF60483.1| 4900|Caenorhabditis elegans Temporarily
assigned gene nameprotein 80 protein.
Length = 4900
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/68 (20%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = -2
Query: 491 PPTVDDAFSYMFRVMAAGARSLALSTLTRPVLASYTVARNPPPSPMHCAQDIPSQ--NNV 318
P + ++ ++ A A+ + L R + ++ PPP H QD+ + +++
Sbjct: 3469 PELTQEELDHIAKITAMAAQDVQLPATQRSITHKVSLTPPPPPPSKHFEQDLTQEELDHI 3528
Query: 317 AIAASTAE 294
A A A+
Sbjct: 3529 ARIAEMAD 3536
>Z69646-7|CAA93471.3| 1484|Caenorhabditis elegans Hypothetical
protein F57C7.4 protein.
Length = 1484
Score = 27.5 bits (58), Expect = 8.4
Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Frame = +1
Query: 349 QCMGLGGGFLATVYDASTGRVRVLNARERAPAAMTLNM-----YENASSTVGGLAIAVPG 513
+C G + A V DAS V + + PA+ L + ++ SS +
Sbjct: 401 KCTSSGPIYTALVDDASVFSVSIDGVEQETPASFGLRLRANPTFKQCSSKTSPKDVQYEW 460
Query: 514 ELRGYGALYQEYGRLP 561
+L G G +Y + +LP
Sbjct: 461 KLNGEGKMYDDGLKLP 476
>U29536-2|AAA68790.1| 759|Caenorhabditis elegans Brf (transcription
factor) homologprotein 1 protein.
Length = 759
Score = 27.5 bits (58), Expect = 8.4
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = -2
Query: 524 PRSSPGTAIASPPTVDDAFSYMFRVMAA-GARSLALSTLTRPVLASYTVARNPPPSPMHC 348
P +S ++I P V A S +V GA+ LA + V +TV P P
Sbjct: 615 PSTSEVSSIEHKPFVPPARSRYAKVKPIIGAKKLAALNEVKNV---HTV-----PEPSAP 666
Query: 347 AQDIPSQNNVAIAASTAEPFFSSISLPTVA 258
A+ I S+ + + S+++P +S +P+VA
Sbjct: 667 AEPIVSEAPLQVKTSSSDPIVTSTEVPSVA 696
>AL110485-29|CAB60376.3| 732|Caenorhabditis elegans Hypothetical
protein Y46G5A.10 protein.
Length = 732
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +3
Query: 351 MHGTRG--RVPSDRVRREHGTGEGTQRQRTSSRRHDPEHVRER 473
+H TRG + PSDRV + G T S H P + E+
Sbjct: 624 LHYTRGISKTPSDRVEKSRYLSRGVSTPHTPSEVHIPYNNPEK 666
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = -3
Query: 412 SPVPCSRRTRSLGTRPRVPCIARKISPHRTTSLSQHRQPSHSFQVSPS 269
+PVP ++ R+L PR SP + S S PS S PS
Sbjct: 199 APVPINKANRNLYRNPRGSLETPTDSPQKGFSSSTESSPSDSMNQFPS 246
>AC006762-4|AAU20835.1| 484|Caenorhabditis elegans Hypothetical
protein Y42G9A.4c protein.
Length = 484
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 460 MYENASSTVGGLAIAVPGELRGYGALYQEYGR 555
M+ N +S GGL ++ PG++ +G YGR
Sbjct: 1 MHRNTTSQHGGLFVSAPGKIILFGEHAVVYGR 32
>AC006762-3|AAU20834.1| 614|Caenorhabditis elegans Hypothetical
protein Y42G9A.4b protein.
Length = 614
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 460 MYENASSTVGGLAIAVPGELRGYGALYQEYGR 555
M+ N +S GGL ++ PG++ +G YGR
Sbjct: 131 MHRNTTSQHGGLFVSAPGKIILFGEHAVVYGR 162
>AC006762-2|AAF60558.2| 607|Caenorhabditis elegans Hypothetical
protein Y42G9A.4a protein.
Length = 607
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 460 MYENASSTVGGLAIAVPGELRGYGALYQEYGR 555
M+ N +S GGL ++ PG++ +G YGR
Sbjct: 31 MHRNTTSQHGGLFVSAPGKIILFGEHAVVYGR 62
>AC006762-1|AAU87813.1| 514|Caenorhabditis elegans Hypothetical
protein Y42G9A.4d protein.
Length = 514
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 460 MYENASSTVGGLAIAVPGELRGYGALYQEYGR 555
M+ N +S GGL ++ PG++ +G YGR
Sbjct: 31 MHRNTTSQHGGLFVSAPGKIILFGEHAVVYGR 62
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,206,749
Number of Sequences: 27780
Number of extensions: 287998
Number of successful extensions: 1097
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1085
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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