BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20i05
(633 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 24 1.1
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 23 2.5
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 22 4.3
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 22 5.7
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 22 5.7
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 22 5.7
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 22 5.7
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 22 5.7
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 22 5.7
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 22 5.7
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 5.7
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 5.7
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 5.7
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 5.7
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 5.7
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 5.7
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 5.7
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 5.7
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 7.5
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 21 9.9
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 24.2 bits (50), Expect = 1.1
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 400 CSRRTRSLGTRPRVPCIARKISPHRTTSLSQHRQPSHSFQVSPS 269
C R+ SL R + +R+ S ++S+ R PS S SPS
Sbjct: 6 CDRK--SLSQRKIIRSRSRRYSKRFSSSIVDRRSPSSSRSPSPS 47
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 23.0 bits (47), Expect = 2.5
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = -2
Query: 371 PPPSPMHCAQDIPSQNNVAIAASTAEPFFSSISLPT 264
P P P+HC P I+ P F I PT
Sbjct: 345 PVPVPIHCGNFPPRPMGPWISIQEQVPRFRYIGPPT 380
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 22.2 bits (45), Expect = 4.3
Identities = 10/31 (32%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +1
Query: 448 MTLNMYE--NASSTVGGLAIAVPGELRGYGA 534
M+ + Y+ + +S +G ++ PG L GYG+
Sbjct: 136 MSTSSYDPYSPNSKIGRDELSQPGSLNGYGS 166
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 399 HGTGEGTQRQRTSSRRHDPEHVRER 473
H E R+RTS RR+ RE+
Sbjct: 23 HNVEEKHLRERTSRRRYSRSREREQ 47
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 399 HGTGEGTQRQRTSSRRHDPEHVRER 473
H E R+RTS RR+ RE+
Sbjct: 23 HNVEEKHLRERTSRRRYSRSREREQ 47
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 399 HGTGEGTQRQRTSSRRHDPEHVRER 473
H E R+RTS RR+ RE+
Sbjct: 23 HNVEEKHLRERTSRRRYSRSREREQ 47
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 399 HGTGEGTQRQRTSSRRHDPEHVRER 473
H E R+RTS RR+ RE+
Sbjct: 23 HNVEEKHLRERTSRRRYSRSREREQ 47
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 399 HGTGEGTQRQRTSSRRHDPEHVRER 473
H E R+RTS RR+ RE+
Sbjct: 23 HNVEEKHLRERTSRRRYSRSREREQ 47
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 399 HGTGEGTQRQRTSSRRHDPEHVRER 473
H E R+RTS RR+ RE+
Sbjct: 23 HNVEEKHLRERTSRRRYSRSREREQ 47
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 399 HGTGEGTQRQRTSSRRHDPEHVRER 473
H E R+RTS RR+ RE+
Sbjct: 23 HNVEEKHLRERTSRRRYSRSREREQ 47
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 399 HGTGEGTQRQRTSSRRHDPEHVRER 473
H E R+RTS RR+ RE+
Sbjct: 272 HNVEEKHLRERTSRRRYSRSREREQ 296
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 399 HGTGEGTQRQRTSSRRHDPEHVRER 473
H E R+RTS RR+ RE+
Sbjct: 272 HNVEEKHLRERTSRRRYSRSREREQ 296
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 399 HGTGEGTQRQRTSSRRHDPEHVRER 473
H E R+RTS RR+ RE+
Sbjct: 272 HNVEEKHLRERTSRRRYSRSREREQ 296
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 399 HGTGEGTQRQRTSSRRHDPEHVRER 473
H E R+RTS RR+ RE+
Sbjct: 272 HNVEEKHLRERTSRRRYSRSREREQ 296
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 399 HGTGEGTQRQRTSSRRHDPEHVRER 473
H E R+RTS RR+ RE+
Sbjct: 272 HNVEEKHLRERTSRRRYSRSREREQ 296
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 399 HGTGEGTQRQRTSSRRHDPEHVRER 473
H E R+RTS RR+ RE+
Sbjct: 272 HNVEEKHLRERTSRRRYSRSREREQ 296
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 399 HGTGEGTQRQRTSSRRHDPEHVRER 473
H E R+RTS RR+ RE+
Sbjct: 271 HNVEEKHLRERTSRRRYSRSREREQ 295
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 399 HGTGEGTQRQRTSSRRHDPEHVRER 473
H E R+RTS RR+ RE+
Sbjct: 272 HNVEEKHLRERTSRRRYSRSREREQ 296
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 7.5
Identities = 11/36 (30%), Positives = 14/36 (38%)
Frame = -2
Query: 371 PPPSPMHCAQDIPSQNNVAIAASTAEPFFSSISLPT 264
P P P++C P I+ P F I PT
Sbjct: 120 PVPVPIYCGNFPPRPMGPWISVQEQVPRFRCIGPPT 155
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 21.0 bits (42), Expect = 9.9
Identities = 7/21 (33%), Positives = 11/21 (52%)
Frame = +3
Query: 369 RVPSDRVRREHGTGEGTQRQR 431
R+PS R+ ++H G R
Sbjct: 302 RIPSTRINKQHTRGNNFSLSR 322
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,050
Number of Sequences: 438
Number of extensions: 4125
Number of successful extensions: 28
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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