Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20i01
         (677 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0695 + 22220054-22220056,22221226-22221276,22221415-222215...    36   0.039
11_06_0310 + 22274762-22275412,22275515-22275725,22276713-222773...    28   7.9  

>12_02_0695 +
           22220054-22220056,22221226-22221276,22221415-22221501,
           22222064-22222144,22222241-22222353,22222482-22222531,
           22222790-22222857
          Length = 150

 Score = 35.5 bits (78), Expect = 0.039
 Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
 Frame = +1

Query: 478 VQSTFAMIKP--IAPSEHGKIITFIMKNDFRIVRMKNGKICKEFAMELYQSIASNNMLPI 651
           V+ ++ MIKP  +     G+II+   K  F +  +K  +  K+ A E Y+ +      P 
Sbjct: 2   VEQSYIMIKPDGVQRGLVGEIISRFEKKGFVLKGLKLFQCPKDLAQEHYKDLKEKPFFPG 61

Query: 652 IIDYVTTG 675
           +I+Y+T+G
Sbjct: 62  LIEYITSG 69


>11_06_0310 +
           22274762-22275412,22275515-22275725,22276713-22277388,
           22277739-22277816,22278228-22278573
          Length = 653

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -3

Query: 555 IFHDECDYFTMFTWSYRLNHGKCTLHIFEKRFPCSRSAIL 436
           IFHD C+ F+ +  +Y L HG     +++ +  C    IL
Sbjct: 509 IFHDWCEAFSTYPRTYDLIHGNGVFTLYKDK-RCKMEDIL 547


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,140,139
Number of Sequences: 37544
Number of extensions: 270914
Number of successful extensions: 609
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 609
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)