Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20i01
         (677 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          24   1.2  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      24   1.2  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          24   1.2  
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    23   2.0  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    23   2.0  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    23   2.7  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    23   2.7  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    22   6.2  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = -3

Query: 600 FFANFAVFHSNDAKIIFHDECDYFTMFTWSYRLNHGKCTLHI 475
           +F +F    +N   I  H +     +    YRLNH   T HI
Sbjct: 461 YFDHFESMLNNGVSIQSHAKAKNTMIKARQYRLNHKPFTYHI 502


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = -3

Query: 600 FFANFAVFHSNDAKIIFHDECDYFTMFTWSYRLNHGKCTLHI 475
           +F +F    +N   I  H +     +    YRLNH   T HI
Sbjct: 461 YFDHFESMLNNGVSIQSHAKAKNTMIKARQYRLNHKPFTYHI 502


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = -3

Query: 600 FFANFAVFHSNDAKIIFHDECDYFTMFTWSYRLNHGKCTLHI 475
           +F +F    +N   I  H +     +    YRLNH   T HI
Sbjct: 87  YFDHFESMLNNGVSIQSHAKAKNTMIKARQYRLNHKPFTYHI 128


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 413 YFQNYYISRIALLLHGKRFSKMCKVHL 493
           Y +  Y+S  AL +H +  +  CK HL
Sbjct: 21  YCEKVYVSLGALKMHIRTHTLPCKCHL 47


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = -3

Query: 600 FFANFAVFHSNDAKIIFHDECDYF-TMFTWSYRLN 499
           FF  +A FH+     ++  E DY+  +  W Y L+
Sbjct: 279 FFICWAPFHTQRLLYVYAQESDYYPDLNEWLYILS 313


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = +1

Query: 301 FDNSVQIIDAKKGKNVLKRVQL--PPLNLDMLQIGN 402
           F N  QI+D K   NV K++ +     N D+  I N
Sbjct: 508 FSNEEQIVDLKAFNNVPKKLNMFYNNFNSDIKSISN 543


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = +1

Query: 301 FDNSVQIIDAKKGKNVLKRVQL--PPLNLDMLQIGN 402
           F N  QI+D K   NV K++ +     N D+  I N
Sbjct: 508 FSNEEQIVDLKAFNNVPKKLNMFYNNFNSDIKSISN 543


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 11/45 (24%), Positives = 21/45 (46%)
 Frame = +1

Query: 133 YLLSY*LQHCILLLPNINRLISIAMVYDYFDKYSFLCEMYDEDAD 267
           ++  Y ++  +LLLP      S   +YD        CE Y+++ +
Sbjct: 127 FVADYKIEGKVLLLPVRGAGKSNITMYDLKSHNDIYCEKYEKNGE 171


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,833
Number of Sequences: 438
Number of extensions: 3883
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)