Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20h24
         (622 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr...    32   0.38 
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr...    32   0.38 
U41995-6|AAA83463.2|  419|Caenorhabditis elegans Hypothetical pr...    31   0.50 
AF039716-9|AAB96734.2|  548|Caenorhabditis elegans Hypothetical ...    31   0.66 
Y14065-2|CAA74393.1|  497|Caenorhabditis elegans catalase 1 prot...    28   4.7  
X82175-1|CAA57665.1|  500|Caenorhabditis elegans catalase protein.     28   4.7  
AL034488-15|CAA22451.1|  500|Caenorhabditis elegans Hypothetical...    28   4.7  

>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical protein
            F59A2.6 protein.
          Length = 1133

 Score = 31.9 bits (69), Expect = 0.38
 Identities = 25/128 (19%), Positives = 62/128 (48%)
 Frame = +3

Query: 192  KAAYKSGEIPDSSMPITLDNIKAKLKESGIFDWQDASLNDRERKELSKLFDAVEIMPPNV 371
            +AA  S  + + ++   ++ ++AKL+E      Q++S  +++ +ELS L + + +     
Sbjct: 680  QAAQSSSSV-EQALRAEIEKLEAKLQEIEKAKMQNSSKREQKVRELSNLNEKMRVEFIAK 738

Query: 372  QNMFSTLRLVERVVKKQLKEGQISESLAGKFQWEKLSTRQRRERPLYHLDKFANVRMYKN 551
            + + S LR     +  +L   + +     K  + +L TR++R       +K   +R+ + 
Sbjct: 739  EKIISDLRSELSTISTELVVQKATVEKT-KMDFGELETREKRATADRENEKMEEIRLRET 797

Query: 552  IS*NLKSL 575
             +  L+++
Sbjct: 798  FAKELETM 805


>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical protein
            F59A2.6 protein.
          Length = 1133

 Score = 31.9 bits (69), Expect = 0.38
 Identities = 25/128 (19%), Positives = 62/128 (48%)
 Frame = +3

Query: 192  KAAYKSGEIPDSSMPITLDNIKAKLKESGIFDWQDASLNDRERKELSKLFDAVEIMPPNV 371
            +AA  S  + + ++   ++ ++AKL+E      Q++S  +++ +ELS L + + +     
Sbjct: 680  QAAQSSSSV-EQALRAEIEKLEAKLQEIEKAKMQNSSKREQKVRELSNLNEKMRVEFIAK 738

Query: 372  QNMFSTLRLVERVVKKQLKEGQISESLAGKFQWEKLSTRQRRERPLYHLDKFANVRMYKN 551
            + + S LR     +  +L   + +     K  + +L TR++R       +K   +R+ + 
Sbjct: 739  EKIISDLRSELSTISTELVVQKATVEKT-KMDFGELETREKRATADRENEKMEEIRLRET 797

Query: 552  IS*NLKSL 575
             +  L+++
Sbjct: 798  FAKELETM 805


>U41995-6|AAA83463.2|  419|Caenorhabditis elegans Hypothetical
           protein E02C12.6 protein.
          Length = 419

 Score = 31.5 bits (68), Expect = 0.50
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +3

Query: 177 EMTDAKAAYKSGEIPDSSMPITLDNIKAKLKESGIFDWQDAS 302
           ++   K  +  G++  S++  TLDN K KLK   I DWQ  S
Sbjct: 261 DLLGLKPVFIHGDLWQSNIMFTLDNSK-KLKLEAIIDWQSVS 301


>AF039716-9|AAB96734.2|  548|Caenorhabditis elegans Hypothetical
           protein W03G9.7 protein.
          Length = 548

 Score = 31.1 bits (67), Expect = 0.66
 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
 Frame = +3

Query: 255 KAKLKESGIFDWQ--DASLNDRERKELSKLFDAVEIMPPNVQNMFSTLRLVERVVKKQ 422
           K KL E  + D+   + ++N  ERK + K F++  I   N++N    L  V + +KKQ
Sbjct: 70  KLKLTEGVVQDYINIEKAINRLERKNVLKKFESQTIYADNLKNTVEQLEAVLKELKKQ 127


>Y14065-2|CAA74393.1|  497|Caenorhabditis elegans catalase 1
           protein.
          Length = 497

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
 Frame = -1

Query: 613 SDGDYKI---LNLI*NNDFKFQEMFLYILTLANLSKW 512
           SD DY I    N I   DF   +MF+ ++T     KW
Sbjct: 252 SDPDYSIRDLFNAIEKGDFPVWKMFIQVMTFEQAEKW 288


>X82175-1|CAA57665.1|  500|Caenorhabditis elegans catalase protein.
          Length = 500

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
 Frame = -1

Query: 613 SDGDYKI---LNLI*NNDFKFQEMFLYILTLANLSKW 512
           SD DY I    N I   DF   +MF+ ++T     KW
Sbjct: 252 SDPDYSIRDLFNAIEKGDFPVWKMFIQVMTFEQAEKW 288


>AL034488-15|CAA22451.1|  500|Caenorhabditis elegans Hypothetical
           protein Y54G11A.5 protein.
          Length = 500

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
 Frame = -1

Query: 613 SDGDYKI---LNLI*NNDFKFQEMFLYILTLANLSKW 512
           SD DY I    N I   DF   +MF+ ++T     KW
Sbjct: 252 SDPDYSIRDLFNAIEKGDFPVWKMFIQVMTFEQAEKW 288


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,664,793
Number of Sequences: 27780
Number of extensions: 270333
Number of successful extensions: 857
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 857
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)