Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20h22
(716 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25B8.09 |||trans-aconitate 3-methyltransferase |Schizosaccha... 36 0.006
SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces p... 35 0.013
SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2 |Schizo... 31 0.22
SPAC25B8.10 |||trans-aconitate 3-methyltransferase |Schizosaccha... 31 0.22
SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2 |Schiz... 29 0.50
SPBC11C11.02 |imp2||contractile ring protein Imp2|Schizosaccharo... 28 1.5
SPCC4G3.04c |coq5||C-methytransferase |Schizosaccharomyces pombe... 28 1.5
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 27 2.7
SPAC4G9.17c |mrps5||mitochondrial ribosomal protein subunit S5|S... 27 3.5
SPAC6G10.09 |||glucosidase I Gls1 |Schizosaccharomyces pombe|chr... 27 3.5
SPCC74.02c |||mRNA cleavage and polyadenylation specificity fact... 27 3.5
SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 26 4.7
SPCC70.08c |||methyltransferase |Schizosaccharomyces pombe|chr 3... 26 6.2
SPAC22H12.03 |||mitochondrial hydrolase|Schizosaccharomyces pomb... 26 6.2
SPCC4G3.11 |mug154||conserved fungal protein|Schizosaccharomyces... 26 6.2
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 25 8.2
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra... 25 8.2
SPCPB16A4.06c |||sequence orphan|Schizosaccharomyces pombe|chr 3... 25 8.2
>SPAC25B8.09 |||trans-aconitate 3-methyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 251
Score = 35.9 bits (79), Expect = 0.006
Identities = 27/102 (26%), Positives = 44/102 (43%)
Frame = +2
Query: 146 FDIKRTFKNAVELGASRGYVSRHFLPDSVEKVTLCDTSRTHLDKAIVGEGVQYEKMIMDE 325
F + T +ELGA G ++ + +++ DT LD + + + +
Sbjct: 32 FSVNET-STILELGAGSGKLTPRIIASQPKEIIAVDTYVEMLD-VLKKKFPNVDCRVGSA 89
Query: 326 ENFELPDDSVDLLVSSLTFHWVNDLPGLFDRIMKCLKPDGVL 451
L D+SVDL+ FHW + L I + LKP+G L
Sbjct: 90 MAIPLEDESVDLVACGQCFHWFANEEAL-KEIYRVLKPNGKL 130
>SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 521
Score = 34.7 bits (76), Expect = 0.013
Identities = 22/76 (28%), Positives = 37/76 (48%)
Frame = +2
Query: 65 ERAACNDEYHLSEYVKEEIGWRTADKIFDIKRTFKNAVELGASRGYVSRHFLPDSVEKVT 244
E +EY E++K + RT D+++DI R + V G V +H L +K+
Sbjct: 370 EEEPTTEEYE-EEFLKTYVP-RTLDEVYDIDRDTE-IVNAGGVNSLVYKHLLNTDFQKLD 426
Query: 245 LCDTSRTHLDKAIVGE 292
L DT++ D+ + E
Sbjct: 427 LNDTTKNQNDQILPNE 442
>SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1513
Score = 30.7 bits (66), Expect = 0.22
Identities = 29/105 (27%), Positives = 42/105 (40%), Gaps = 1/105 (0%)
Frame = +2
Query: 326 ENFELPDDSVDLLVSSLTFHWVNDLPGLFDRIMKCLKPDGVLLACTFGGDTLMELRQALQ 505
E F D +D + FH+ D GL + I D V F ME +
Sbjct: 1359 EEFSPRDSFIDCTICERRFHY--DCVGLNNEIA-----DSV---SKFTCPICMEQSGGIY 1408
Query: 506 LSDLERRGGVSP-HISPFTRPTDIGGLLNAAGFTLQTVDIDKMTI 637
L R G+ P HIS F++ + L ++G+TL DK +
Sbjct: 1409 PWQLRPRNGMHPDHISGFSKEVETDPKLGSSGYTLNNSKFDKAAV 1453
>SPAC25B8.10 |||trans-aconitate 3-methyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 256
Score = 30.7 bits (66), Expect = 0.22
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2
Query: 338 LPDDSVDLLVSSLTFHWVNDLPGLFDRIMKCLKPDGVL 451
L D+SVDL++ + FHW + + I + LKP+G L
Sbjct: 98 LEDESVDLVLCAQCFHWFANEEAM-KEIYRVLKPNGKL 134
>SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1273
Score = 29.5 bits (63), Expect = 0.50
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 332 NFPHPLSSFHIERPHQLLPYRDEFWMCHTVSPS 234
N+P+PL + H+ L YRD+ + H V+PS
Sbjct: 249 NYPYPLDASHLSSQQLLSMYRDQ--VSHGVTPS 279
>SPBC11C11.02 |imp2||contractile ring protein
Imp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 670
Score = 27.9 bits (59), Expect = 1.5
Identities = 36/131 (27%), Positives = 54/131 (41%), Gaps = 12/131 (9%)
Frame = +2
Query: 8 SSIYRTMNIFDRKTKMIQRERAACNDEYHLSEYVKEEIGWR-TADKIFDI---KRTFKNA 175
+ + +T N + Q AA D Y + + E WR T DK+ DI +R F +
Sbjct: 180 AKLNKTQNAITASSSDYQSAVAAVRDSY--ARWTNE---WRSTCDKLQDIEEERRHFLKS 234
Query: 176 V----ELGASRGYVSRHFLPDSVEK-VTLCDTSRTHL---DKAIVGEGVQYEKMIMDEEN 331
V L SR + + + K + C S+ L D G G+ D
Sbjct: 235 VMWTFTLLISRSCFNDDQACERIRKNLEQCSVSQDVLEFIDAKSTGTGIPQPPKFYDYYK 294
Query: 332 FELPDDSVDLL 364
E+PDDSV+L+
Sbjct: 295 GEVPDDSVELV 305
>SPCC4G3.04c |coq5||C-methytransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 305
Score = 27.9 bits (59), Expect = 1.5
Identities = 11/44 (25%), Positives = 22/44 (50%)
Frame = +2
Query: 335 ELPDDSVDLLVSSLTFHWVNDLPGLFDRIMKCLKPDGVLLACTF 466
++PD+S+D+ + +P + ++ + LKP GV F
Sbjct: 179 KIPDNSIDMYTIAFGIRNCTHIPKVLEQAYRVLKPGGVFSCLEF 222
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 27.1 bits (57), Expect = 2.7
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +2
Query: 26 MNIFDRKTKMIQRERAACNDEYHLSEYVKEE--IGWRTADKIFDIKRTFKNAVEL 184
M I + K ++QR+ DE +SE +EE + + F++ K A+EL
Sbjct: 658 MEILNDKISVLQRQLTDVKDELDVSEEEREEAIVAGQKLSASFELMSNEKQALEL 712
>SPAC4G9.17c |mrps5||mitochondrial ribosomal protein subunit
S5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 387
Score = 26.6 bits (56), Expect = 3.5
Identities = 13/49 (26%), Positives = 29/49 (59%)
Frame = -2
Query: 529 SSPLQVRQLERLTQLHQSVSTEGASQQHTIRFEAFHYPVKESWKVVHPV 383
+SPL +++E L++L ++ + + ++ RF+ H P E++ HP+
Sbjct: 81 TSPLSPKKVENLSKLFNDINEDVSIEELKSRFKD-HLPFYENYIRNHPL 128
>SPAC6G10.09 |||glucosidase I Gls1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 808
Score = 26.6 bits (56), Expect = 3.5
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -3
Query: 207 DTYPREAPSSTAFLNVLLMSNILSAVR 127
D YPR P STA L+V L+S + S R
Sbjct: 580 DDYPRAQPPSTAELHVDLLSWMTSFTR 606
>SPCC74.02c |||mRNA cleavage and polyadenylation specificity factor
complex associated protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 710
Score = 26.6 bits (56), Expect = 3.5
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -3
Query: 207 DTYPREAPSSTAFLNVLLMSNILSAVRQPISS 112
+T E PSS + +NV +++ + S RQ ISS
Sbjct: 156 NTASHEVPSSKSDVNVQMLARLKSKSRQKISS 187
>SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1692
Score = 26.2 bits (55), Expect = 4.7
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -1
Query: 365 PADQRCRLVIQNFPHPLSSFH 303
P C LV+ NF HP SS +
Sbjct: 1007 PVISACELVVNNFLHPQSSLY 1027
>SPCC70.08c |||methyltransferase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 260
Score = 25.8 bits (54), Expect = 6.2
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +2
Query: 335 ELPDDSVDLLVSSLTFHWVNDLPGLFDRIMK 427
E+P +S D++ S+ HW+ P +MK
Sbjct: 91 EIPSESFDVVFSNAALHWIMRQPKNRPIVMK 121
>SPAC22H12.03 |||mitochondrial hydrolase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 25.8 bits (54), Expect = 6.2
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 182 LGASRGYVSRHFLPDSVEKVTLCDTSRTHLDKAIVGEGVQYEKMI-MDEEN 331
+GA V+ PD VEK+ + D S + D G + KMI +DE N
Sbjct: 96 MGAKTAMVTALKWPDKVEKLVVVDNSPWYQDLP-RDYGAYFRKMIQIDEAN 145
>SPCC4G3.11 |mug154||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 316
Score = 25.8 bits (54), Expect = 6.2
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -3
Query: 114 SLTYSDKWYSSLQAALSLCIILV-FLSNIFIVRY 16
S+ S W+ + + LS+C + + FL+ IF R+
Sbjct: 78 SINTSRSWFRAFLSFLSICFLFISFLNFIFSTRF 111
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 25.4 bits (53), Expect = 8.2
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +2
Query: 452 LACTFGGDTLMELRQALQLSDLERRGGVSPHISPFTRPTDIGGLLN 589
L +G D+ + R+A SDL P + F RP + G L+
Sbjct: 237 LGVPYGPDSPLYYRRATIASDLRPSVYQHPQLYDFNRPESLSGQLD 282
>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
transporting Cta4 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1211
Score = 25.4 bits (53), Expect = 8.2
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 107 VKEEIGWRTADKIFDIKRTFKNAVELGASR 196
VKE I R + + D+ KNAV G +R
Sbjct: 315 VKESIELRPEEAVIDVDELDKNAVLFGGTR 344
>SPCPB16A4.06c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 126
Score = 25.4 bits (53), Expect = 8.2
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -2
Query: 487 LHQSVSTEGASQQHTIRFEAFHYPVKESWK 398
L +SV ++ A + T+R + P+ E+W+
Sbjct: 90 LQKSVGSQSADEFETLREQTVPNPIAEAWR 119
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,098,817
Number of Sequences: 5004
Number of extensions: 67161
Number of successful extensions: 193
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 193
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 335201398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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