Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20h22
(716 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0640 - 5391407-5391523,5391659-5391748,5391837-5391901,539... 76 3e-14
01_06_0361 + 28733493-28733523,28733743-28733870,28733982-287340... 34 0.098
03_02_0200 - 6360682-6362517,6362599-6362670 31 0.91
11_06_0549 + 24868344-24868930,24869740-24869957,24870018-248701... 29 2.8
04_03_0265 - 13638816-13641348,13641432-13641490 29 2.8
04_03_0264 - 13619329-13621708,13621742-13621830 29 2.8
03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,324... 29 2.8
06_01_1183 + 10157813-10159909 29 3.7
02_04_0628 + 24589313-24589472,24589604-24589765,24589850-245899... 29 3.7
10_04_0004 + 7389321-7390013 29 4.9
10_05_0065 + 8736744-8738879 28 6.4
04_04_0775 - 27989704-27990281,27990407-27990653,27990743-279908... 28 6.4
10_07_0190 + 13931399-13931600,13931720-13932003,13932158-13933303 28 8.5
09_02_0549 + 10485415-10486107 28 8.5
07_03_0466 + 18474929-18475315,18476035-18476298,18476717-184767... 28 8.5
05_03_0579 - 15714195-15714887 28 8.5
05_03_0219 + 10451316-10451718,10451812-10452008 28 8.5
05_01_0033 + 220125-220190,220274-224445,224863-224949,225048-22... 28 8.5
04_03_0007 + 9287927-9288619 28 8.5
>12_01_0640 -
5391407-5391523,5391659-5391748,5391837-5391901,
5392201-5392288,5392511-5392589,5393232-5393370,
5393530-5393863
Length = 303
Score = 75.8 bits (178), Expect = 3e-14
Identities = 36/76 (47%), Positives = 48/76 (63%)
Frame = +2
Query: 485 ELRQALQLSDLERRGGVSPHISPFTRPTDIGGLLNAAGFTLQTVDIDKMTIWYPSAFELM 664
ELR A ++ +ER GG+SP +SP + D G LL AGFTL VD+D+ T+ Y SA EL+
Sbjct: 159 ELRIACTIAQMEREGGISPRMSPLAQVRDAGNLLTRAGFTLPGVDVDRYTVKYNSALELV 218
Query: 665 RDLRLAGESTAAHNRS 712
LR GE+ A R+
Sbjct: 219 EHLRAMGETNALFQRN 234
Score = 33.1 bits (72), Expect = 0.23
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +2
Query: 26 MNIFDRKTKMIQRERAACNDEYHLSEYVKEEIGWRTADKIFDIKRTFKNAVELGASRGYV 205
+ IFDR K R+RAA ++ + + + D++ D ++ F +A+ LG S G V
Sbjct: 47 VKIFDRDLKRRHRDRAAW--AMGETDALADAVADNLLDRLEDCRKAFPSALCLGGSAGAV 104
Query: 206 SRHFL-PDSVEKVTLCDTS 259
R +EK+ + D S
Sbjct: 105 RRSLRGRGGIEKLIMMDMS 123
>01_06_0361 +
28733493-28733523,28733743-28733870,28733982-28734044,
28735074-28735211,28735357-28735494,28735700-28735843,
28736065-28736175,28736260-28736401,28736469-28736779,
28737057-28737218,28737313-28737366,28737472-28737546,
28737636-28737731
Length = 530
Score = 34.3 bits (75), Expect = 0.098
Identities = 21/62 (33%), Positives = 30/62 (48%)
Frame = +2
Query: 269 LDKAIVGEGVQYEKMIMDEENFELPDDSVDLLVSSLTFHWVNDLPGLFDRIMKCLKPDGV 448
L++AI G E + D PD++ D++ S T + D P LF K LKP G
Sbjct: 362 LERAI-GRKCSVEFEVADCTKKTYPDNTFDVIYSRDTILHIQDKPSLFKSFFKWLKPGGK 420
Query: 449 LL 454
+L
Sbjct: 421 VL 422
>03_02_0200 - 6360682-6362517,6362599-6362670
Length = 635
Score = 31.1 bits (67), Expect = 0.91
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Frame = +2
Query: 488 LRQALQLSDLERRGGVSPHISPFTRPTDIGGLLNAA----GFTLQTVDIDKMTIWYPSAF 655
+++AL L+ +ER GG HI + G++N + GF +D +T+ P+A
Sbjct: 243 VKRALTLA-MERGGGAEGHILDLLKSASDEGIINESQITKGFNRLIDSVDDLTLDVPNAR 301
Query: 656 ELMRDLRLAGES 691
L++ + L S
Sbjct: 302 RLLKSMILKASS 313
>11_06_0549 +
24868344-24868930,24869740-24869957,24870018-24870175,
24870202-24870633,24870717-24871064
Length = 580
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/63 (34%), Positives = 24/63 (38%)
Frame = +1
Query: 391 ERPSRTL*QDNEMPQT*WCVAGLHLRWRHSDGAASGAPTVGLGAERRGFSSYITVYQTHG 570
E PS L D E + AG RWR +DG S A G GF V G
Sbjct: 135 ESPSGVLSGDGERQEQRLGSAG---RWRTADGGCSTAVGRGREGGEHGFKRGAKVVGRRG 191
Query: 571 HWG 579
WG
Sbjct: 192 GWG 194
>04_03_0265 - 13638816-13641348,13641432-13641490
Length = 863
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -3
Query: 690 LSPANLRSRINSKALGYQIVILSMSTVCNVKPAALSKPPMSVGLVN 553
L+P L S+I K Y ++ + +C K +S+P SV L+N
Sbjct: 717 LAPEWLTSQITEKVDVYSFGVVLLEIICGRKNIDISQPEESVQLIN 762
>04_03_0264 - 13619329-13621708,13621742-13621830
Length = 822
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -3
Query: 690 LSPANLRSRINSKALGYQIVILSMSTVCNVKPAALSKPPMSVGLVN 553
L+P L S+I K Y ++ + +C K +S+P SV L+N
Sbjct: 676 LAPEWLTSQITEKVDVYSFGVVLLEIICGRKNIDISQPEESVQLIN 721
>03_01_0423 +
3240224-3240394,3241464-3241628,3242322-3242339,
3242494-3242836,3244138-3248540,3248928-3249107,
3249108-3250892,3251055-3252173
Length = 2727
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Frame = +2
Query: 473 DTLMELRQALQLSDLERRGGVSPHISPF----TRPTDIG 577
+ LM R L DL+ GVSPH+ T+P DIG
Sbjct: 326 EVLMPTRAPFDLDDLQDAAGVSPHLLTVKRNGTQPDDIG 364
>06_01_1183 + 10157813-10159909
Length = 698
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/24 (54%), Positives = 18/24 (75%), Gaps = 3/24 (12%)
Frame = -2
Query: 478 SVSTEGASQQHTIR---FEAFHYP 416
S STEG++QQHTI+ F+ F +P
Sbjct: 248 SASTEGSTQQHTIKEWTFQTFGFP 271
>02_04_0628 +
24589313-24589472,24589604-24589765,24589850-24589983,
24590108-24590275,24590481-24590562,24590734-24591512
Length = 494
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -1
Query: 338 IQNFPHPLSSFHIERPHQLLPYRDEFWMCHTVSPSP 231
+QNF +++ + P LLP + + CH VS P
Sbjct: 343 VQNFQGNINNAQVHTPQTLLPQYNVYPQCHGVSMMP 378
>10_04_0004 + 7389321-7390013
Length = 230
Score = 28.7 bits (61), Expect = 4.9
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +2
Query: 524 RGGVSPHISPFTRPTDIGGLLNAAGFTLQTVDIDKMTIWYPSAFELMRDLRLAGESTAAH 703
R +P I+P RP D L N G + V DK PS ++ + + GE++ +
Sbjct: 172 RSSNAPRIAPIWRPIDKSPLGNPTGKKILPVTADKTVAPPPS--KINKQSNVPGETSGSR 229
Query: 704 N 706
N
Sbjct: 230 N 230
>10_05_0065 + 8736744-8738879
Length = 711
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/39 (28%), Positives = 14/39 (35%)
Frame = +1
Query: 460 HLRWRHSDGAASGAPTVGLGAERRGFSSYITVYQTHGHW 576
+ RW S G G P R + Y+ HG W
Sbjct: 90 YARWEESPGGGGGDPARARSVYERALAGGAPAYRDHGVW 128
>04_04_0775 -
27989704-27990281,27990407-27990653,27990743-27990837,
27990918-27992388,27993142-27993194,27993295-27993430
Length = 859
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -3
Query: 471 PPKVQASNTPSGLRHFIILSKSPGRSFT 388
PPK+ +++P G+ +IL SPGRS T
Sbjct: 294 PPKL--NDSPRGVSRIVILKPSPGRSQT 319
>10_07_0190 + 13931399-13931600,13931720-13932003,13932158-13933303
Length = 543
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -1
Query: 548 IYEEKPLLSAPSPTVGAPDAAPSECLHRRCKPATHH 441
+ ++ +AP GA + AP C R C PA H
Sbjct: 248 LQQDAAAAAAPPNAAGASNWAPRPCNCRECAPAAGH 283
>09_02_0549 + 10485415-10486107
Length = 230
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 536 SPHISPFTRPTDIGGLLNAAGFTLQTVDIDKMTIWYPSAFELMRDLRLAGESTAAHN 706
+P I+P RP D L N G + V DK PS ++ + + GE++ + N
Sbjct: 176 APRIAPIWRPIDKSPLGNPTGKKILPVTADKTVAPPPS--KINKQSNVPGETSGSRN 230
>07_03_0466 +
18474929-18475315,18476035-18476298,18476717-18476755,
18476756-18476878,18477118-18477240
Length = 311
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -1
Query: 368 KPADQRCRLVIQNFPHPLSSFHIERPHQLLPYR 270
K A++ C LV+ + P + + ER H+L +R
Sbjct: 38 KKANRSCSLVVASSPRSILELYEERAHELRDFR 70
>05_03_0579 - 15714195-15714887
Length = 230
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 536 SPHISPFTRPTDIGGLLNAAGFTLQTVDIDKMTIWYPSAFELMRDLRLAGESTAAHN 706
+P I+P RP D L N G + V DK PS ++ + + GE++ + N
Sbjct: 176 APRIAPIWRPIDKSPLGNPTGKKILPVTADKTVAPPPS--KINKQSNVPGETSGSRN 230
>05_03_0219 + 10451316-10451718,10451812-10452008
Length = 199
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 536 SPHISPFTRPTDIGGLLNAAGFTLQTVDIDKMTIWYPSAFELMRDLRLAGESTAAHN 706
+P I+P RP D L N G + V DK PS ++ + + GE++ + N
Sbjct: 145 APRIAPIWRPIDKSPLGNPTGKKILPVTADKTVAPPPS--KINKQSNVPGETSGSRN 199
>05_01_0033 + 220125-220190,220274-224445,224863-224949,225048-225084,
225296-225356,225666-226918
Length = 1891
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -3
Query: 678 NLRSRINSKALGYQIVILSMSTVCNVKPAALSKPP--MSVGLVNGDI*GETPPL 523
++ S I K Q + LS +++ PA+L+KPP +S+ L + G P L
Sbjct: 1692 SIPSFIGDKFTALQSLDLSFNSLTGAIPASLAKPPKLISIDLSRNQLTGSIPRL 1745
>04_03_0007 + 9287927-9288619
Length = 230
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +2
Query: 536 SPHISPFTRPTDIGGLLNAAGFTLQTVDIDKMTIWYPSAFELMRDLRLAGESTAAHN 706
+P I+P RP D L N G + V DK+ PS ++ + + GE++ + N
Sbjct: 176 APGIAPIWRPIDKSPLGNPTGKKILPVTADKIVAPPPS--KINKQSNVPGETSGSRN 230
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,154,104
Number of Sequences: 37544
Number of extensions: 490128
Number of successful extensions: 1534
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1534
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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