Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20h22
         (716 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83234-1|CAB70169.1|  313|Caenorhabditis elegans Hypothetical pr...   180   7e-46
Z81528-6|CAB04285.1|  633|Caenorhabditis elegans Hypothetical pr...    34   0.12 
Z54327-9|CAA91122.2|  839|Caenorhabditis elegans Hypothetical pr...    32   0.36 
Z73898-3|CAC42390.2|  606|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z73898-2|CAC42388.1|  667|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z73898-1|CAC42389.1|  647|Caenorhabditis elegans Hypothetical pr...    31   1.1  
M23064-1|AAA27892.1|  609|Caenorhabditis elegans Na+/H+ antiport...    31   1.1  
AF497835-1|AAM18113.1|  647|Caenorhabditis elegans putative Na-H...    31   1.1  
AF497834-1|AAM18112.1|  667|Caenorhabditis elegans putative Na-H...    31   1.1  
AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical ...    28   5.8  
U40945-1|AAA81719.2|  656|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>Z83234-1|CAB70169.1|  313|Caenorhabditis elegans Hypothetical
           protein K09E4.3 protein.
          Length = 313

 Score =  180 bits (439), Expect = 7e-46
 Identities = 91/230 (39%), Positives = 140/230 (60%), Gaps = 3/230 (1%)
 Frame = +2

Query: 32  IFDRKTKMIQRERAACNDEYHLSEYVKEEIGWRTADKIFDIKRTFKNAVELGASRGYVSR 211
           +FDR+ K  QR+ A    ++  ++Y+KEEIGWR ADK+FD+ +     +++G   G+++ 
Sbjct: 2   VFDRQMKRGQRDWAVRQPDFKAAQYLKEEIGWRVADKVFDLTKFNPLVLDIGCGVGHIAP 61

Query: 212 HFLPDSVEKVTLCDTSRTHLDKAIVGEG--VQYEKMIMDEENFE-LPDDSVDLLVSSLTF 382
           H + ++V K+   D S      +   E   V  E+  +DEE  +   ++  DLL++S++ 
Sbjct: 62  HLIKENVGKIIQVDMSGGMAQSSAKCEDPEVIVERRTVDEETLDGFHENQFDLLLTSMSA 121

Query: 383 HWVNDLPGLFDRIMKCLKPDGVLLACTFGGDTLMELRQALQLSDLERRGGVSPHISPFTR 562
           HW+N LP    +    +KPD   +      DTL ELR +LQL++LER GGVS HISPF +
Sbjct: 122 HWINHLPQWMRKCHDIVKPDCPFIGSMLAEDTLYELRCSLQLAELERIGGVSSHISPFVK 181

Query: 563 PTDIGGLLNAAGFTLQTVDIDKMTIWYPSAFELMRDLRLAGESTAAHNRS 712
             DIGGLL++AGF + T+D D++ + YP+ F LM DL+L GES   H R+
Sbjct: 182 TQDIGGLLSSAGFDMITLDSDEIQVGYPNMFALMYDLQLMGESHCTHRRN 231


>Z81528-6|CAB04285.1|  633|Caenorhabditis elegans Hypothetical
           protein F35E2.7 protein.
          Length = 633

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 16/52 (30%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
 Frame = -3

Query: 159 LLMSNILSAVRQPISSLTYSDKWYSSLQAA-LSLCIILVFLSNIFIVRYIEL 7
           LL+  ++S++   +      +KWY +L +  LSL +I++F  NI +++Y +L
Sbjct: 342 LLIVALISSILLAVLVFETFEKWYLTLTSTNLSLLVIILFFLNILLIKYDKL 393


>Z54327-9|CAA91122.2|  839|Caenorhabditis elegans Hypothetical
           protein C26D10.4 protein.
          Length = 839

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
 Frame = +2

Query: 158 RTFKNAVE---LGASRGYVSRHFLPDSVEKVTLCDTSRTHLDKAIVGEGVQYEKMIMDEE 328
           RT +NA +   +    GYV   +L +SV+  +    + TH    IVG    + K+  +  
Sbjct: 92  RTLQNAKDNSTIKGGNGYVFDTYLSNSVKNCSKIAANSTHTGVWIVGSDASW-KLEKELN 150

Query: 329 NFELPDDSV 355
            F+LP DS+
Sbjct: 151 MFDLPQDSI 159


>Z73898-3|CAC42390.2|  606|Caenorhabditis elegans Hypothetical
           protein ZK822.3c protein.
          Length = 606

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 319 HYHLFILNALTNYCLIEMSSGCVTQCHLLHAVR 221
           H+ L+ + A   +CLI  + G V QC++L+  R
Sbjct: 288 HFDLYFICATLFFCLIYRAIGIVVQCYILNRFR 320


>Z73898-2|CAC42388.1|  667|Caenorhabditis elegans Hypothetical
           protein ZK822.3b protein.
          Length = 667

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 319 HYHLFILNALTNYCLIEMSSGCVTQCHLLHAVR 221
           H+ L+ + A   +CLI  + G V QC++L+  R
Sbjct: 348 HFDLYFICATLFFCLIYRAIGIVVQCYILNRFR 380


>Z73898-1|CAC42389.1|  647|Caenorhabditis elegans Hypothetical
           protein ZK822.3a protein.
          Length = 647

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 319 HYHLFILNALTNYCLIEMSSGCVTQCHLLHAVR 221
           H+ L+ + A   +CLI  + G V QC++L+  R
Sbjct: 328 HFDLYFICATLFFCLIYRAIGIVVQCYILNRFR 360


>M23064-1|AAA27892.1|  609|Caenorhabditis elegans Na+/H+ antiporter
           protein.
          Length = 609

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 319 HYHLFILNALTNYCLIEMSSGCVTQCHLLHAVR 221
           H+ L+ + A   +CLI  + G V QC++L+  R
Sbjct: 291 HFDLYFICATLFFCLIYRAIGIVVQCYILNRFR 323


>AF497835-1|AAM18113.1|  647|Caenorhabditis elegans putative Na-H
           exchanger isoform 9b protein.
          Length = 647

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 319 HYHLFILNALTNYCLIEMSSGCVTQCHLLHAVR 221
           H+ L+ + A   +CLI  + G V QC++L+  R
Sbjct: 328 HFDLYFICATLFFCLIYRAIGIVVQCYILNRFR 360


>AF497834-1|AAM18112.1|  667|Caenorhabditis elegans putative Na-H
           exchanger isoform 9a protein.
          Length = 667

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 319 HYHLFILNALTNYCLIEMSSGCVTQCHLLHAVR 221
           H+ L+ + A   +CLI  + G V QC++L+  R
Sbjct: 348 HFDLYFICATLFFCLIYRAIGIVVQCYILNRFR 380


>AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical
            protein Y108G3AL.7 protein.
          Length = 1192

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = -3

Query: 246  SVTFSTLSGRKCRDTYPREAPSSTAFLNVLLMSNILSAVRQPISSLTYSDKWY 88
            +VT   LS  K     PR+  ++T F+   ++S+ILS   Q + +  Y D+W+
Sbjct: 943  TVTTPVLSVPKSEGRGPRKEDTTTKFVRANVLSHILSG--QKLRAF-YGDEWF 992


>U40945-1|AAA81719.2|  656|Caenorhabditis elegans Hypothetical
           protein F10D7.1 protein.
          Length = 656

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = -3

Query: 183 SSTAFLNVLLMSNILSAVRQPISSLTYSDKWYSSLQAALSLCIILVFLSNIFIVRYIELA 4
           S TA L  + + N    +R+P+S       +  +  A  SLC I  +L NIF   +   A
Sbjct: 27  SITALLVNVYLLNCARYLRRPVSVNLRLCVFLLACDALCSLCYIFTYLINIFFSHFSNCA 86


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,520,039
Number of Sequences: 27780
Number of extensions: 401132
Number of successful extensions: 1231
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1230
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)