Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20h19
(574 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 45 9e-06
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 37 0.002
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 36 0.003
SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces pomb... 33 0.022
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 31 0.091
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 31 0.16
SPAP27G11.04c |||tRNA specific adenosine deaminase subunit Tad3 ... 29 0.37
SPBC839.10 |usp107|snu71|U1 snRNP-associated protein Usp107|Schi... 27 1.5
SPCC4G3.19 |alp16||gamma tubulin complex subunit Alp16 |Schizosa... 27 1.5
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 27 1.5
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 27 2.0
SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces pombe|c... 27 2.6
SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pomb... 26 3.4
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 26 3.4
SPAC1952.01 ||SPAC1B3.19|Pig-U|Schizosaccharomyces pombe|chr 1||... 26 4.5
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 26 4.5
SPCC1442.13c |||RNA-binding protein, G-pathc type|Schizosaccharo... 25 6.0
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 7.9
SPAC14C4.15c ||SPAPJ760.01c|dipeptidyl aminopeptidase |Schizosac... 25 7.9
SPAC2F7.11 |nrd1|msa2|RNA-binding protein Nrd1|Schizosaccharomyc... 25 7.9
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 25 7.9
SPCC31H12.06 |mug111||sequence orphan|Schizosaccharomyces pombe|... 25 7.9
SPBC776.10c |cog6||Golgi transport complex peripheral subunit Co... 25 7.9
>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 44.8 bits (101), Expect = 9e-06
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +1
Query: 130 HITSEDFVRKYLGLFSEDDFNKESVQLIAGIVDMDKDGYISFSEFQAFEGLLCVPDALYK 309
H+ +F + Y F D + + + D DK+GYI F EF + + K
Sbjct: 42 HLNKSEFQKIYKQFFPFGD-PSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDK 100
Query: 310 T--AFQLFDTNGNGLVAFDEFAEVM 378
AFQL+D + NGL+++DE ++
Sbjct: 101 LIWAFQLYDLDNNGLISYDEMLRIV 125
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 36.7 bits (81), Expect = 0.002
Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 5/146 (3%)
Frame = +1
Query: 73 EKLHEIFLKYATVEKNGEKHITSEDF--VRKYLGLFSEDDFNKESVQLIAGIVDMDKDGY 246
E++ E ++ +++ + +ITS + V + LG +Q + VD D +G
Sbjct: 9 EQIAEFREAFSLFDRDQDGNITSNELGVVMRSLG----QSPTAAELQDMINEVDADGNGT 64
Query: 247 ISFSEFQAFEGLLCVP---DALYKTAFQLFDTNGNGLVAFDEFAEVMRKTALHKKLPFNM 417
I F+EF + + AF++FD +GNG + +E V+ T+L ++L
Sbjct: 65 IDFTEFLTMMARKMKDTDNEEEVREAFKVFDKDGNGYITVEELTHVL--TSLGERLSQEE 122
Query: 418 ESTFVRLYFGKDKKRLVTYPEFSQFL 495
+ +R D ++ Y EFS+ +
Sbjct: 123 VADMIR-EADTDGDGVINYEEFSRVI 147
Score = 34.3 bits (75), Expect = 0.013
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Frame = +1
Query: 298 ALYKTAFQLFDTNGNGLVAFDEFAEVMRKTALHKKLPFNMESTFVRLYFGKDKKRLVTYP 477
A ++ AF LFD + +G + +E VMR + P E + D + +
Sbjct: 12 AEFREAFSLFDRDQDGNITSNELGVVMRSLG---QSPTAAELQDMINEVDADGNGTIDFT 68
Query: 478 EF----SQFLHDFHEEYGV-EAFKKCDKEGTGFIT 567
EF ++ + D E V EAFK DK+G G+IT
Sbjct: 69 EFLTMMARKMKDTDNEEEVREAFKVFDKDGNGYIT 103
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 36.3 bits (80), Expect = 0.003
Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Frame = +1
Query: 100 YATVEKNGEKHITSEDFVRKYLGLFSEDDFNKESVQLIAGIVDMDKDGYISFSE----FQ 267
++ V+++G + ++F+ L +FS +E ++ I D+D+DGYIS E +
Sbjct: 62 FSVVDEDGGGDVDFQEFINS-LSVFSVHGNKEEKLKFAFKIYDIDRDGYISNGELYLVLK 120
Query: 268 AFEGLLCVPDALY----KTAFQLFDTNGNGLVAFDEFAEVM 378
G D L KT ++ D + +G ++F+EF +++
Sbjct: 121 MMVGTNLREDQLQQIVDKTIMEV-DKDRDGKISFEEFKDIV 160
>SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 141
Score = 33.5 bits (73), Expect = 0.022
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 2/95 (2%)
Frame = +1
Query: 295 DALYKTAFQLFDTNGNGLVAFDEFAEVMRKTALHKKLP--FNMESTFVRLYFGKDKKRLV 468
D+ YK AF LFD +G G + +++R + L +EST + +++
Sbjct: 5 DSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAEVDMEQFLQVL 64
Query: 469 TYPEFSQFLHDFHEEYGVEAFKKCDKEGTGFITAG 573
P D EE+ V+ F+ DK+ TG I G
Sbjct: 65 NRPNGFDMPGD-PEEF-VKGFQVFDKDATGMIGVG 97
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 31.5 bits (68), Expect = 0.091
Identities = 21/86 (24%), Positives = 41/86 (47%)
Frame = +1
Query: 307 KTAFQLFDTNGNGLVAFDEFAEVMRKTALHKKLPFNMESTFVRLYFGKDKKRLVTYPEFS 486
K AF L+D + +GL+ V+R ++ + L D+K+ +++
Sbjct: 12 KEAFVLYDIDKDGLIPTSHVGSVLRSLGINVT-DAELAKLSNELGDAIDEKKFMSFVSNK 70
Query: 487 QFLHDFHEEYGVEAFKKCDKEGTGFI 564
+ EEY ++AF+ DK+ +G+I
Sbjct: 71 LRETESEEEY-IKAFRVFDKDNSGYI 95
Score = 25.4 bits (53), Expect = 6.0
Identities = 29/119 (24%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
Frame = +1
Query: 61 RADSEKLHEIFLKYATVEKNGEKHITSEDFVRKYLGLFSEDDFNKESVQLIAGIVD-MDK 237
+ ++++ E F+ Y ++K+G + V + LG+ D E +L + D +D+
Sbjct: 5 KEQTDEMKEAFVLY-DIDKDGLIPTSHVGSVLRSLGINVTD---AELAKLSNELGDAIDE 60
Query: 238 DGYISFSEFQAFEGLLCVPDALYKTAFQLFDTNGNGLVAFDEFAEVMRKTALHKKLPFN 414
++SF + E + Y AF++FD + +G + +FA+ M+ L +KL N
Sbjct: 61 KKFMSFVSNKLRE---TESEEEYIKAFRVFDKDNSGYIETAKFADYMK--TLGEKLSDN 114
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 30.7 bits (66), Expect = 0.16
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +1
Query: 223 VDMDKDGYISFSEFQAFEGLLCVPDALYKTAFQLFDTNGNGLVAFDEF 366
VD GY+S SE +F +P+ + + L DTN NG + EF
Sbjct: 270 VDKAHKGYVSGSEAYSFFLASKLPEDVLAQIWDLSDTNSNGKLNIGEF 317
>SPAP27G11.04c |||tRNA specific adenosine deaminase subunit Tad3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 315
Score = 29.5 bits (63), Expect = 0.37
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -3
Query: 227 STIPAMSWTDSLLKSSSENNPRYFLTKSSLVICFSPFFST--VAYFKKISCSFSES 66
+T+P + W L+KS E R T++ + CF P +++ Y K+I ES
Sbjct: 14 ATVPELDWPFKLIKSHLET--RKLETENVWIACFEPKYASKVTQYVKQIRSKQKES 67
>SPBC839.10 |usp107|snu71|U1 snRNP-associated protein
Usp107|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 27.5 bits (58), Expect = 1.5
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -1
Query: 361 RQKQQVHSHSYRIVERRFCTERPARTADLQTPGTR 257
R+K Q+ + Y ERR+ ARTA L+ R
Sbjct: 400 RRKDQLEAEEYYARERRWMNREKARTAALEREAAR 434
>SPCC4G3.19 |alp16||gamma tubulin complex subunit Alp16
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 759
Score = 27.5 bits (58), Expect = 1.5
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = -3
Query: 182 SSENNPRYFLTKSSLVICFSPFFSTVAYFKKISCSF 75
S +N Y + L+ C +P+F + K+SC++
Sbjct: 330 SCQNTISYPIALQCLIYCSNPYFKRLELALKVSCAY 365
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 27.5 bits (58), Expect = 1.5
Identities = 24/94 (25%), Positives = 42/94 (44%)
Frame = +1
Query: 226 DMDKDGYISFSEFQAFEGLLCVPDALYKTAFQLFDTNGNGLVAFDEFAEVMRKTALHKKL 405
D D G +SF EFQ F LL + F+ + T+G+ ++ ++F + T+ +L
Sbjct: 343 DADHSGKLSFEEFQHFVSLLKTRSEIV-DIFKEY-TSGSDKMSLEQFRHFL-STSQKARL 399
Query: 406 PFNMESTFVRLYFGKDKKRLVTYPEFSQFLHDFH 507
+ T + D ++ EF+ FL H
Sbjct: 400 DSDSIRTLYVSFCSNDDSKMGLI-EFTSFLLSPH 432
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 27.1 bits (57), Expect = 2.0
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Frame = +1
Query: 187 FNKESVQLIAGIVDMDKDG--YISFSEF-QAFEGLLCVPDAL--YKTAFQLFDTNGNGLV 351
FN E +++ + D DK G Y+ +F + + D L K AF+LFD + G +
Sbjct: 68 FNAEKSEVLKILRDFDKTGKGYLQMEDFVRVMTEKIVERDPLEEIKRAFELFDDDETGKI 127
Query: 352 AFDEFAEVMRK 384
+ V ++
Sbjct: 128 SLRNLRRVAKE 138
>SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1142
Score = 26.6 bits (56), Expect = 2.6
Identities = 15/56 (26%), Positives = 31/56 (55%)
Frame = -3
Query: 299 ASGTHSRPSNAWNSENDM*PSLSMSTIPAMSWTDSLLKSSSENNPRYFLTKSSLVI 132
+SG + R +NA + ND P+L + IP+++ + S SS ++K ++++
Sbjct: 22 SSGFYKR-NNANTASNDEKPNLEQNDIPSVTSSGSSTPSSISIEKEIKISKGNVIV 76
>SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 2386
Score = 26.2 bits (55), Expect = 3.4
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 19 QHKMTSRRGAGYLKRADSEKLHEIFLKYATV-EKNGE 126
+H++ S GY K +++K EI+L+ A + KNG+
Sbjct: 1638 KHQILSTHLVGYEKFENTKKTAEIYLEIARISRKNGQ 1674
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 26.2 bits (55), Expect = 3.4
Identities = 22/78 (28%), Positives = 41/78 (52%)
Frame = -3
Query: 374 TSANSSKATSPFPFVSNS*KAVLYRASGTHSRPSNAWNSENDM*PSLSMSTIPAMSWTDS 195
+S++SS ++SP S S + +S + S S++ +S + S S S+ S + S
Sbjct: 155 SSSSSSSSSSPSSSSSKSSSSSKSSSSSSSSSKSSSSSSSSSK-SSSSSSSSSKSSASPS 213
Query: 194 LLKSSSENNPRYFLTKSS 141
KSSS+ + F+T ++
Sbjct: 214 SSKSSSKFSSSSFITSTT 231
>SPAC1952.01 ||SPAC1B3.19|Pig-U|Schizosaccharomyces pombe|chr
1|||Manual
Length = 408
Score = 25.8 bits (54), Expect = 4.5
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 156 SYKIFACDMLLTVLLNGGVL 97
SY I+AC M LTV +N L
Sbjct: 166 SYAIYACCMALTVFINPNAL 185
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 25.8 bits (54), Expect = 4.5
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 67 DSEKLHEIFLKYATVEKNGEKHITSEDFVRKYLGL 171
D+E LH LKY ++ N + S DFV L L
Sbjct: 2376 DTEMLHNNLLKYGIIDFNQNSMLVS-DFVLPVLSL 2409
>SPCC1442.13c |||RNA-binding protein, G-pathc
type|Schizosaccharomyces pombe|chr 3|||Manual
Length = 207
Score = 25.4 bits (53), Expect = 6.0
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 97 KYATVEKNGEKHITSEDFVRKYLGLFSE 180
K +K KH+++ED + KY LF E
Sbjct: 31 KIVQPKKKPSKHLSNEDALEKYEMLFGE 58
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 25.0 bits (52), Expect = 7.9
Identities = 26/103 (25%), Positives = 47/103 (45%)
Frame = -3
Query: 371 SANSSKATSPFPFVSNS*KAVLYRASGTHSRPSNAWNSENDM*PSLSMSTIPAMSWTDSL 192
S +SS +S P S++ ++ +S + S+PS + S + + ST + + S+
Sbjct: 158 SISSSSLSSSDPLTSSTFSSL--SSSTSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSV 215
Query: 191 LKSSSENNPRYFLTKSSLVICFSPFFSTVAYFKKISCSFSESA 63
+ SSS + T +S + S ST + S S S S+
Sbjct: 216 VSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSS 258
>SPAC14C4.15c ||SPAPJ760.01c|dipeptidyl aminopeptidase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 853
Score = 25.0 bits (52), Expect = 7.9
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 10/119 (8%)
Frame = +1
Query: 148 FVRKYLGLFSEDDFNKESVQLIAGIVDMDKDGYISFSEFQAFEGLLCVP--DALYKTAFQ 321
FV+ ++ F++ ES+++ + + YI+ + E L+ V Y+
Sbjct: 343 FVKLFVNCFTDSG---ESIEVDSSFPLSTQHRYITDVAWAGNEKLMFVEVLRGNYERVTS 399
Query: 322 LFDTNGNGL-VAFDEFAE--VMRKTALHKK-LPF----NMESTFVRLYFGKDKKRLVTY 474
LFD + + E +E + ++LH K L F N++ +VR YF +KKR+ Y
Sbjct: 400 LFDLSSRKTTIENTEVSEHPLALTSSLHLKYLSFESLGNLKERYVRQYFLSNKKRIAIY 458
>SPAC2F7.11 |nrd1|msa2|RNA-binding protein Nrd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 529
Score = 25.0 bits (52), Expect = 7.9
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +1
Query: 349 VAFDEFAEVMRKTALHKKLPFNMESTFVRLYFGKDK 456
+AF F + ++LP N + + R+Y+G+D+
Sbjct: 243 IAFVHFLNIAAAIKAVQELPLNPKWSKRRIYYGRDR 278
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 25.0 bits (52), Expect = 7.9
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 103 ATVEKNGEKH-ITSEDFVRKYLGLFSEDDFNKESVQLIAGIVDMDKD 240
+TV +N H ++ F+R+ D+F K S L G + +D+D
Sbjct: 1103 STVIRNNSSHELSLVAFIREMAMPVPNDEFKKISTILARGYLALDED 1149
>SPCC31H12.06 |mug111||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 468
Score = 25.0 bits (52), Expect = 7.9
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -3
Query: 161 YFLTKSSLVICFSPFFSTVAYFKKISCSF 75
YF S+L I + F T AYF S SF
Sbjct: 101 YFFFASTLSILYMDDFPTCAYFVIFSISF 129
>SPBC776.10c |cog6||Golgi transport complex peripheral subunit Cog6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 675
Score = 25.0 bits (52), Expect = 7.9
Identities = 20/88 (22%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Frame = -2
Query: 438 QANERALHVEGQLL-VEGRFSHNLGEFVKSNKSIPIRIE*LKGGFVQSVRHAQQTFKRLE 262
+ + + L V+ QLL V+ E+ K I + + F + ++ K +E
Sbjct: 84 ELSSQTLSVQSQLLKVKNSIDSYKNEWSKKTNDAQILLNSYET-FCEEEALIEEKLKNIE 142
Query: 261 LGERYVTV----LVHVDDSSDELDRFFV 190
+ E+ + L+H+ S+D DRF++
Sbjct: 143 IFEKNFVIMDDDLIHLTSSTDVDDRFYL 170
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,370,586
Number of Sequences: 5004
Number of extensions: 49956
Number of successful extensions: 183
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 177
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 244081442
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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