Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20h18
(614 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 34 0.093
AC006833-8|AAF60944.1| 360|Caenorhabditis elegans Hypothetical ... 31 0.86
Z70267-3|CAA94214.1| 534|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z70267-2|CAA94213.1| 525|Caenorhabditis elegans Hypothetical pr... 28 4.6
U61951-3|AAB03158.4| 1783|Caenorhabditis elegans Egg laying defe... 28 4.6
U61951-2|AAM75372.1| 1877|Caenorhabditis elegans Egg laying defe... 28 4.6
AF023602-1|AAC47755.1| 1783|Caenorhabditis elegans putative L-ty... 28 4.6
Z81048-3|CAB02841.1| 407|Caenorhabditis elegans Hypothetical pr... 28 6.1
U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical pr... 28 6.1
AF099003-3|ABA00149.1| 759|Caenorhabditis elegans Hypothetical ... 28 6.1
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 28 6.1
Z22181-4|CAA80182.1| 824|Caenorhabditis elegans Hypothetical pr... 27 8.1
>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
protein F39C12.1 protein.
Length = 5105
Score = 33.9 bits (74), Expect = 0.093
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = +1
Query: 346 VXXTQKFLEFHKQKSKGEKQDGTTNKMTPLIGALSVEDLKQSNKNSETAKSS----PSPE 513
V T L+ S ++ G+ K + I K+ S TA+SS PSPE
Sbjct: 3049 VPSTNVTLDDQASSSSNQQGPGSAKKPSASIFTALFGRKKEKKMTSSTAESSSIPIPSPE 3108
Query: 514 RQHGDTKISKXKPVQPVLKKISFG 585
Q ++ ++ P+ P +KK G
Sbjct: 3109 NQEATSETNRSSPILPRIKKPETG 3132
>AC006833-8|AAF60944.1| 360|Caenorhabditis elegans Hypothetical
protein ZK616.8 protein.
Length = 360
Score = 30.7 bits (66), Expect = 0.86
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Frame = +1
Query: 382 QKSKGEKQDGTTNKMTPLIGALSVE----DLKQSNKNSETAKSSPSP--ERQHGDTKISK 543
+ S G K + K +P V+ D + S+KN+ K P+P G +K
Sbjct: 152 EASNGSKNSKSKTKFSPNQKRREVKKSDSDTESSHKNTRRGKPVPAPPSSNSKGSNDKNK 211
Query: 544 XKPVQPVLKKI 576
K VQ V+KK+
Sbjct: 212 RKSVQEVVKKV 222
>Z70267-3|CAA94214.1| 534|Caenorhabditis elegans Hypothetical
protein K04C1.2b protein.
Length = 534
Score = 28.3 bits (60), Expect = 4.6
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +1
Query: 391 KGEKQDGTTNKMTPLIGALSVEDLKQSNKNSETAKSSPSPERQHGDTKISKXKPVQPV 564
K +K D + G L L+ SN+N + S+P +TKIS K P+
Sbjct: 160 KDKKLDEQARIERNVAGILKNAALEISNRNDDPQNSTPKCSDTKKNTKISPKKSASPI 217
>Z70267-2|CAA94213.1| 525|Caenorhabditis elegans Hypothetical
protein K04C1.2a protein.
Length = 525
Score = 28.3 bits (60), Expect = 4.6
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +1
Query: 391 KGEKQDGTTNKMTPLIGALSVEDLKQSNKNSETAKSSPSPERQHGDTKISKXKPVQPV 564
K +K D + G L L+ SN+N + S+P +TKIS K P+
Sbjct: 151 KDKKLDEQARIERNVAGILKNAALEISNRNDDPQNSTPKCSDTKKNTKISPKKSASPI 208
>U61951-3|AAB03158.4| 1783|Caenorhabditis elegans Egg laying defective
protein 19,isoform a protein.
Length = 1783
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +1
Query: 370 EFHKQKSKGEKQ-DGTTNKMTPLIGALSVEDLKQSNKNSETAKSSP--SPERQH 522
E + S GE++ D + + PL+ + + D++ N+NS +A P + RQH
Sbjct: 1714 EIEEAYSLGEQEIDLAADSLAPLMQHVGMHDIRDINENSRSALLRPAENSSRQH 1767
>U61951-2|AAM75372.1| 1877|Caenorhabditis elegans Egg laying defective
protein 19,isoform b protein.
Length = 1877
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +1
Query: 370 EFHKQKSKGEKQ-DGTTNKMTPLIGALSVEDLKQSNKNSETAKSSP--SPERQH 522
E + S GE++ D + + PL+ + + D++ N+NS +A P + RQH
Sbjct: 1808 EIEEAYSLGEQEIDLAADSLAPLMQHVGMHDIRDINENSRSALLRPAENSSRQH 1861
>AF023602-1|AAC47755.1| 1783|Caenorhabditis elegans putative L-type
calcium channelalpha 1 subunit protein.
Length = 1783
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +1
Query: 370 EFHKQKSKGEKQ-DGTTNKMTPLIGALSVEDLKQSNKNSETAKSSP--SPERQH 522
E + S GE++ D + + PL+ + + D++ N+NS +A P + RQH
Sbjct: 1714 EIEEAYSLGEQEIDLAADSLAPLMQHVGMHDIRDINENSRSALLRPAENSSRQH 1767
>Z81048-3|CAB02841.1| 407|Caenorhabditis elegans Hypothetical
protein C41G7.4 protein.
Length = 407
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = +1
Query: 217 SNEVKRKLKRL----FXITVRADDNLPKAICHDCLQQVSTLXLY 336
S++ K+ LK+L F I +A N+ + ICH C + + +Y
Sbjct: 266 SDDYKKFLKKLSYEEFFIDPKAKGNVGRMICHSCSPNLEIVRVY 309
>U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical protein
C27F2.8 protein.
Length = 1715
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +1
Query: 379 KQKSKGEKQDGTTNKMTPLIGALSVEDLKQSNKNSETAKSSPSPE-RQHGDTKISKXKPV 555
++K + +Q N P+I V+ NK K++P P + G+ + K V
Sbjct: 1261 RKKKRAAQQKENNNLEAPIIVQPVVQSPPVQNKMEPAKKTTPGPSPKPKGNNQRKKHVQV 1320
Query: 556 QPVLK 570
PV K
Sbjct: 1321 PPVTK 1325
>AF099003-3|ABA00149.1| 759|Caenorhabditis elegans Hypothetical
protein Y59C2A.3 protein.
Length = 759
Score = 27.9 bits (59), Expect = 6.1
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +1
Query: 358 QKFLEFHKQKSKGEKQDGTTNKMTPLIGALSVEDLKQSNKNSETAKSSPSPERQHGDTKI 537
+KF ++++K + KQ T + PLI S+ + +S + T + S +PE++ D I
Sbjct: 125 EKFA-YNRRKYESRKQRKTEER--PLIDIESLMPMLESKPDVATQEFSYAPEQREADASI 181
Query: 538 S 540
S
Sbjct: 182 S 182
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 27.9 bits (59), Expect = 6.1
Identities = 24/96 (25%), Positives = 38/96 (39%), Gaps = 1/96 (1%)
Frame = +1
Query: 280 LPKAICHDCLQQVSTLXLYAVKVXXTQKFLEFHKQKSKGEKQDGTTNK-MTPLIGALSVE 456
LP A H L L +V + E + KG+ D T +T S E
Sbjct: 292 LPSAEYHSVRYDERNLSLRKAQVEL-KTAQEAPAVREKGDANDRTDKDCVTHPHDLQSTE 350
Query: 457 DLKQSNKNSETAKSSPSPERQHGDTKISKXKPVQPV 564
+ S+ NS+ ++ P P+ + T K K +P+
Sbjct: 351 EPTTSDSNSQVSEDIPPPKNKESGTPPLKEKTPEPI 386
>Z22181-4|CAA80182.1| 824|Caenorhabditis elegans Hypothetical
protein ZK632.5 protein.
Length = 824
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +1
Query: 139 NLEKIXVRELSCRLCLCTDVVKLXPLSNEVKRKL 240
NL K+ + + SCR +C D+ ++ V R++
Sbjct: 319 NLPKLNIHDASCRFQICDDIFEIVSAHYHVIREM 352
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,843,281
Number of Sequences: 27780
Number of extensions: 212083
Number of successful extensions: 662
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 662
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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