Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20h15
(672 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL445231-3|CAH71961.1| 1162|Homo sapiens transcription terminati... 30 6.6
AL391476-7|CAI12738.1| 1162|Homo sapiens transcription terminati... 30 6.6
AL022319-1|CAI19662.1| 2016|Homo sapiens calcium channel, voltag... 30 6.6
AL022312-6|CAI19180.1| 2016|Homo sapiens calcium channel, voltag... 30 6.6
AL008716-1|CAI17903.1| 2016|Homo sapiens calcium channel, voltag... 30 6.6
AF393329-1|AAM67414.1| 2188|Homo sapiens voltage-dependent calci... 30 6.6
AF211189-1|AAF44626.1| 1981|Homo sapiens T-type calcium channel ... 30 6.6
AF142567-1|AAF25722.1| 2223|Homo sapiens T calcium channel alpha... 30 6.6
AF129133-1|AAD45251.1| 2016|Homo sapiens T-type calcium channel ... 30 6.6
AF080255-1|AAD49435.1| 1162|Homo sapiens lodestar protein protein. 30 6.6
AB032946-1|BAA86434.1| 1024|Homo sapiens KIAA1120 protein protein. 30 6.6
>AL445231-3|CAH71961.1| 1162|Homo sapiens transcription termination
factor, RNA polymerase II protein.
Length = 1162
Score = 30.3 bits (65), Expect = 6.6
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +2
Query: 449 PSTSVHPWKSKVLRRCRVSRLSIFFMHSP 535
P++ +H WK++V +R ++L ++ H P
Sbjct: 649 PASLIHHWKNEVEKRVNSNKLRVYLYHGP 677
>AL391476-7|CAI12738.1| 1162|Homo sapiens transcription termination
factor, RNA polymerase II protein.
Length = 1162
Score = 30.3 bits (65), Expect = 6.6
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +2
Query: 449 PSTSVHPWKSKVLRRCRVSRLSIFFMHSP 535
P++ +H WK++V +R ++L ++ H P
Sbjct: 649 PASLIHHWKNEVEKRVNSNKLRVYLYHGP 677
>AL022319-1|CAI19662.1| 2016|Homo sapiens calcium channel,
voltage-dependent, alpha 1I subunit protein.
Length = 2016
Score = 30.3 bits (65), Expect = 6.6
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Frame = +2
Query: 209 IDCLGFVKNSFNEIEQPFRLDFALQTLDLMFSLVNLTRMGLLCS*LRAPSLWHSFMEEED 388
I CL V S QP L+ AL+ + MF+ V + L L A L F + +
Sbjct: 1496 IICLNVVTMSLEHYNQPTSLETALKYCNYMFTTVFVLEAVLK---LVAFGLRRFFKDRWN 1552
Query: 389 TFFKANLLFSTFKMT--EVQSSPSTSVHPWKSKVLRRCRVSRL 511
A +L S +T E++ + + ++P +++R R++R+
Sbjct: 1553 QLDLAIVLLSVMGITLEEIEINAALPINPTIIRIMRVLRIARV 1595
>AL022312-6|CAI19180.1| 2016|Homo sapiens calcium channel,
voltage-dependent, alpha 1I subunit protein.
Length = 2016
Score = 30.3 bits (65), Expect = 6.6
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Frame = +2
Query: 209 IDCLGFVKNSFNEIEQPFRLDFALQTLDLMFSLVNLTRMGLLCS*LRAPSLWHSFMEEED 388
I CL V S QP L+ AL+ + MF+ V + L L A L F + +
Sbjct: 1496 IICLNVVTMSLEHYNQPTSLETALKYCNYMFTTVFVLEAVLK---LVAFGLRRFFKDRWN 1552
Query: 389 TFFKANLLFSTFKMT--EVQSSPSTSVHPWKSKVLRRCRVSRL 511
A +L S +T E++ + + ++P +++R R++R+
Sbjct: 1553 QLDLAIVLLSVMGITLEEIEINAALPINPTIIRIMRVLRIARV 1595
>AL008716-1|CAI17903.1| 2016|Homo sapiens calcium channel,
voltage-dependent, alpha 1I subunit protein.
Length = 2016
Score = 30.3 bits (65), Expect = 6.6
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Frame = +2
Query: 209 IDCLGFVKNSFNEIEQPFRLDFALQTLDLMFSLVNLTRMGLLCS*LRAPSLWHSFMEEED 388
I CL V S QP L+ AL+ + MF+ V + L L A L F + +
Sbjct: 1496 IICLNVVTMSLEHYNQPTSLETALKYCNYMFTTVFVLEAVLK---LVAFGLRRFFKDRWN 1552
Query: 389 TFFKANLLFSTFKMT--EVQSSPSTSVHPWKSKVLRRCRVSRL 511
A +L S +T E++ + + ++P +++R R++R+
Sbjct: 1553 QLDLAIVLLSVMGITLEEIEINAALPINPTIIRIMRVLRIARV 1595
>AF393329-1|AAM67414.1| 2188|Homo sapiens voltage-dependent calcium
channel T-type alpha 1I subunit protein.
Length = 2188
Score = 30.3 bits (65), Expect = 6.6
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Frame = +2
Query: 209 IDCLGFVKNSFNEIEQPFRLDFALQTLDLMFSLVNLTRMGLLCS*LRAPSLWHSFMEEED 388
I CL V S QP L+ AL+ + MF+ V + L L A L F + +
Sbjct: 1461 IICLNVVTMSLEHYNQPTSLETALKYCNYMFTTVFVLEAVLK---LVAFGLRRFFKDRWN 1517
Query: 389 TFFKANLLFSTFKMT--EVQSSPSTSVHPWKSKVLRRCRVSRL 511
A +L S +T E++ + + ++P +++R R++R+
Sbjct: 1518 QLDLAIVLLSVMGITLEEIEINAALPINPTIIRIMRVLRIARV 1560
>AF211189-1|AAF44626.1| 1981|Homo sapiens T-type calcium channel
alpha1 subunit Alpha1I-a isoform protein.
Length = 1981
Score = 30.3 bits (65), Expect = 6.6
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Frame = +2
Query: 209 IDCLGFVKNSFNEIEQPFRLDFALQTLDLMFSLVNLTRMGLLCS*LRAPSLWHSFMEEED 388
I CL V S QP L+ AL+ + MF+ V + L L A L F + +
Sbjct: 1461 IICLNVVTMSLEHYNQPTSLETALKYCNYMFTTVFVLEAVLK---LVAFGLRRFFKDRWN 1517
Query: 389 TFFKANLLFSTFKMT--EVQSSPSTSVHPWKSKVLRRCRVSRL 511
A +L S +T E++ + + ++P +++R R++R+
Sbjct: 1518 QLDLAIVLLSVMGITLEEIEINAALPINPTIIRIMRVLRIARV 1560
>AF142567-1|AAF25722.1| 2223|Homo sapiens T calcium channel alpha1I
subunit, delta36B splice variant protein.
Length = 2223
Score = 30.3 bits (65), Expect = 6.6
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Frame = +2
Query: 209 IDCLGFVKNSFNEIEQPFRLDFALQTLDLMFSLVNLTRMGLLCS*LRAPSLWHSFMEEED 388
I CL V S QP L+ AL+ + MF+ V + L L A L F + +
Sbjct: 1496 IICLNVVTMSLEHYNQPTSLETALKYCNYMFTTVFVLEAVLK---LVAFGLRRFFKDRWN 1552
Query: 389 TFFKANLLFSTFKMT--EVQSSPSTSVHPWKSKVLRRCRVSRL 511
A +L S +T E++ + + ++P +++R R++R+
Sbjct: 1553 QLDLAIVLLSVMGITLEEIEINAALPINPTIIRIMRVLRIARV 1595
>AF129133-1|AAD45251.1| 2016|Homo sapiens T-type calcium channel
alpha1I subunit protein.
Length = 2016
Score = 30.3 bits (65), Expect = 6.6
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Frame = +2
Query: 209 IDCLGFVKNSFNEIEQPFRLDFALQTLDLMFSLVNLTRMGLLCS*LRAPSLWHSFMEEED 388
I CL V S QP L+ AL+ + MF+ V + L L A L F + +
Sbjct: 1496 IICLNVVTMSLEHYNQPTSLETALKYCNYMFTTVFVLEAVLK---LVAFGLRRFFKDRWN 1552
Query: 389 TFFKANLLFSTFKMT--EVQSSPSTSVHPWKSKVLRRCRVSRL 511
A +L S +T E++ + + ++P +++R R++R+
Sbjct: 1553 QLDLAIVLLSVMGITLEEIEINAALPINPTIIRIMRVLRIARV 1595
>AF080255-1|AAD49435.1| 1162|Homo sapiens lodestar protein protein.
Length = 1162
Score = 30.3 bits (65), Expect = 6.6
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +2
Query: 449 PSTSVHPWKSKVLRRCRVSRLSIFFMHSP 535
P++ +H WK++V +R ++L ++ H P
Sbjct: 649 PASLIHHWKNEVEKRVNSNKLRVYLYHGP 677
>AB032946-1|BAA86434.1| 1024|Homo sapiens KIAA1120 protein protein.
Length = 1024
Score = 30.3 bits (65), Expect = 6.6
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Frame = +2
Query: 209 IDCLGFVKNSFNEIEQPFRLDFALQTLDLMFSLVNLTRMGLLCS*LRAPSLWHSFMEEED 388
I CL V S QP L+ AL+ + MF+ V + L L A L F + +
Sbjct: 297 IICLNVVTMSLEHYNQPTSLETALKYCNYMFTTVFVLEAVLK---LVAFGLRRFFKDRWN 353
Query: 389 TFFKANLLFSTFKMT--EVQSSPSTSVHPWKSKVLRRCRVSRL 511
A +L S +T E++ + + ++P +++R R++R+
Sbjct: 354 QLDLAIVLLSVMGITLEEIEINAALPINPTIIRIMRVLRIARV 396
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,633,745
Number of Sequences: 237096
Number of extensions: 2184618
Number of successful extensions: 4376
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4369
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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