Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20h10
(264 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_02_0607 - 11183382-11183387,11183481-11183637,11184220-111842... 43 3e-05
10_08_0423 + 17801221-17801416,17802239-17803212 29 0.68
09_02_0207 - 5793848-5794276,5794523-5794645,5794742-5795250,579... 28 0.89
09_06_0082 + 20749425-20749589,20750137-20750238,20750320-207503... 27 2.7
08_02_1041 - 23876849-23876959,23877853-23878046,23878621-238786... 27 2.7
06_03_0740 - 24006485-24006629,24006821-24006864,24006954-240071... 26 4.8
01_06_0465 - 29573972-29574110,29574300-29574343,29574434-295746... 26 4.8
10_08_0614 - 19238064-19238132,19238381-19238407,19238436-192385... 25 6.3
06_03_1229 + 28571131-28571235,28572108-28572656,28572749-285729... 25 6.3
05_06_0234 - 26602660-26602728,26602814-26602988,26603077-266031... 25 6.3
01_07_0204 + 41974475-41976766 25 8.3
01_05_0801 + 25353708-25353914,25354307-25354429,25355035-253552... 25 8.3
01_01_0171 + 1446221-1446902,1447040-1447221,1447339-1447409,144... 25 8.3
>09_02_0607 -
11183382-11183387,11183481-11183637,11184220-11184284,
11184397-11184469,11184759-11184905,11185515-11185562,
11185637-11185716,11186112-11186439,11186525-11186576,
11187397-11187523,11187613-11187990
Length = 486
Score = 43.2 bits (97), Expect = 3e-05
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = +1
Query: 127 EINEADEEALKLFKSSKTERVRTLADIIKEKITDKHTELQTQ 252
EI+E DE+AL F S T R+L DII EKI +K E+ T+
Sbjct: 128 EIDEEDEKALAAFMSKDTSSKRSLGDIILEKIREKDAEISTE 169
>10_08_0423 + 17801221-17801416,17802239-17803212
Length = 389
Score = 28.7 bits (61), Expect = 0.68
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +1
Query: 106 DTYYDNIEINEADEEALKLFKSSKTERVRTLADIIKEKITDKHTELQTQ 252
+TY + ++ A KL + KT VRT ++ +++ D+H EL+T+
Sbjct: 45 ETYLQDTICDDPATRA-KLERLCKTTTVRTRYTVMSKELLDEHPELRTE 92
>09_02_0207 -
5793848-5794276,5794523-5794645,5794742-5795250,
5795543-5795648,5795798-5795959,5796094-5796144,
5796229-5796394,5796624-5797093
Length = 671
Score = 28.3 bits (60), Expect = 0.89
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +2
Query: 14 VRLQQNMSLLCQALKIKDQIVQIQRRMTWNLTHTMITLKSTKQMKK 151
V Q N+S L ++K+Q ++ +RR L + T +T+ +K+
Sbjct: 465 VNFQNNVSSLNATRRLKEQQLEAERREIQELKQALATASATQSVKE 510
>09_06_0082 +
20749425-20749589,20750137-20750238,20750320-20750384,
20750471-20750588,20750937-20751012,20751304-20751365,
20751457-20751588,20751686-20751739,20751969-20752034,
20752115-20752189,20752271-20752321
Length = 321
Score = 26.6 bits (56), Expect = 2.7
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 109 TYYDNIEINEADEEALKLFKSSKTERVRTLADIIKEK 219
++Y+ I IN+A ++ LF E VRT+AD KEK
Sbjct: 243 SFYELI-INKARGKSGPLFHFDVHEDVRTIADATKEK 278
>08_02_1041 -
23876849-23876959,23877853-23878046,23878621-23878691,
23878956-23879009,23879051-23879187
Length = 188
Score = 26.6 bits (56), Expect = 2.7
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +1
Query: 142 DEEALKLFKSSKTERVRTLADIIKEKITDKHTELQTQFSDA 264
DE+A K+ + TE++ +D I K+ TE++ +F D+
Sbjct: 140 DEDAEKV--EAITEKIENFSDKIDAKVEPIFTEIEKEFEDS 178
>06_03_0740 -
24006485-24006629,24006821-24006864,24006954-24007122,
24007226-24007413,24007572-24007634,24007992-24008084,
24009837-24009932,24010024-24010067,24010184-24010357,
24010764-24010974
Length = 408
Score = 25.8 bits (54), Expect = 4.8
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 127 EINEADEEALKLFKSSKTERV 189
EI+E+DEEALK K K R+
Sbjct: 227 EIHESDEEALKYLKDIKWCRI 247
>01_06_0465 -
29573972-29574110,29574300-29574343,29574434-29574602,
29574707-29574894,29575081-29575145,29575257-29575311,
29575502-29575594,29576035-29576130,29576259-29576302,
29576419-29576431
Length = 301
Score = 25.8 bits (54), Expect = 4.8
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 127 EINEADEEALKLFKSSKTERV 189
EI+E+DEEALK K K R+
Sbjct: 122 EIHESDEEALKYLKDIKWCRI 142
>10_08_0614 -
19238064-19238132,19238381-19238407,19238436-19238510,
19238637-19239317,19239423-19239554,19239676-19239723,
19239828-19239878,19240015-19240134,19241121-19241261,
19241701-19241865,19241981-19242160,19242314-19242445,
19242536-19242643,19242779-19242883,19243217-19243321,
19243407-19243463,19243991-19244010,19244299-19244377,
19245021-19245080,19245562-19245615,19246535-19246600,
19246938-19246990,19247361-19247450,19248152-19248249,
19248348-19248721
Length = 1029
Score = 25.4 bits (53), Expect = 6.3
Identities = 13/56 (23%), Positives = 28/56 (50%)
Frame = +1
Query: 97 LEPDTYYDNIEINEADEEALKLFKSSKTERVRTLADIIKEKITDKHTELQTQFSDA 264
L+ N+EINE E+ L+L + T + + ++ D ++LQ + +++
Sbjct: 695 LQEQLQQKNVEINELQEKVLRLEQQLTTNTEASPEQCTEHELHDLKSKLQLKEAES 750
>06_03_1229 +
28571131-28571235,28572108-28572656,28572749-28572918,
28573454-28573669,28573787-28573946
Length = 399
Score = 25.4 bits (53), Expect = 6.3
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1
Query: 118 DNIEINEADEEALKLFKSSKTERVRTL 198
DNIE+ E + KS K RVRTL
Sbjct: 291 DNIELGSGGAELVITNKSEKGTRVRTL 317
>05_06_0234 -
26602660-26602728,26602814-26602988,26603077-26603120,
26603204-26603381,26603468-26603652,26603737-26603801,
26603985-26604066,26604342-26604434,26605096-26605191,
26605312-26605355,26605467-26605530
Length = 364
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 127 EINEADEEALKLFKSSKTERV 189
EI E DEEALK K K R+
Sbjct: 148 EIQERDEEALKYLKDIKWYRI 168
>01_07_0204 + 41974475-41976766
Length = 763
Score = 25.0 bits (52), Expect = 8.3
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = +2
Query: 8 RLVRLQQNMSLLCQALKIKDQIVQIQRRMTWNL 106
R V+ ++ S+L A ++ +Q+ +++RR W L
Sbjct: 668 REVKGDRSKSVLFDACRLAEQLRRLERRKRWRL 700
>01_05_0801 + 25353708-25353914,25354307-25354429,25355035-25355205,
25355303-25355392,25355497-25355583,25355664-25355719,
25355812-25355905,25356032-25356144,25356211-25356283,
25356603-25356683,25356865-25356951,25357031-25357135,
25357279-25357385,25357481-25357541,25357931-25358158,
25359720-25360677,25360816-25360997,25361237-25361326,
25361422-25361709,25361844-25362056,25362560-25362784
Length = 1212
Score = 25.0 bits (52), Expect = 8.3
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 124 IEINEADEEALKLFKSSKTERVRTLADIIK-EKITDKHTELQ 246
+E ADE LKL + K E+ + I+K E+ D +L+
Sbjct: 954 LEQERADENVLKLVREHKREKEAAVKKILKLEQQVDAKQKLE 995
>01_01_0171 +
1446221-1446902,1447040-1447221,1447339-1447409,
1447480-1447486,1447530-1447619,1447694-1447981,
1448121-1448333,1448860-1449087
Length = 586
Score = 25.0 bits (52), Expect = 8.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 124 IEINEADEEALKLFKSSKTERVRTLADIIK 213
+E +ADE LKL + K E+ L I+K
Sbjct: 327 LEQQKADESVLKLVEEHKREKQAALDKILK 356
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.308 0.128 0.340
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,899,079
Number of Sequences: 37544
Number of extensions: 37098
Number of successful extensions: 98
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 98
length of database: 14,793,348
effective HSP length: 66
effective length of database: 12,315,444
effective search space used: 258624324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
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