Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20h10
(264 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50070-8|CAA90397.1| 263|Caenorhabditis elegans Hypothetical pr... 27 2.4
U40941-5|AAA81710.1| 300|Caenorhabditis elegans Hypothetical pr... 26 3.2
U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated p... 25 5.6
U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated p... 25 5.6
AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin... 25 5.6
AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectr... 25 5.6
AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectr... 25 5.6
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 25 7.4
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 25 7.4
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 25 7.4
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 25 7.4
U41544-1|AAA83183.2| 2275|Caenorhabditis elegans Hypothetical pr... 25 9.8
AF016669-2|AAB66099.2| 455|Caenorhabditis elegans Hypothetical ... 25 9.8
>Z50070-8|CAA90397.1| 263|Caenorhabditis elegans Hypothetical
protein F43G6.8 protein.
Length = 263
Score = 26.6 bits (56), Expect = 2.4
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 106 DTYYDNIEINEADEEALKLFKSSKTERVRTLADIIKE 216
D YYD+ I E D + L+ + R L D IKE
Sbjct: 114 DHYYDSRNITEEDRDELQDKLDEEAANYRDLEDRIKE 150
>U40941-5|AAA81710.1| 300|Caenorhabditis elegans Hypothetical
protein F35C8.5 protein.
Length = 300
Score = 26.2 bits (55), Expect = 3.2
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +2
Query: 41 LCQALKIKDQIVQIQRRMTWNLTHTMITLKSTKQM 145
LC KD +Q R++TW+L + L+ Q+
Sbjct: 67 LCNVPFFKDAKIQKDRKVTWDLIKKSLKLQGWNQL 101
>U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated
protein 70, isoform a protein.
Length = 2257
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 97 LEPDTYYDNIEINEADEEALKLF 165
LE + Y+D +INE E L+L+
Sbjct: 474 LEAENYHDQAKINERKENVLQLW 496
>U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated
protein 70, isoform b protein.
Length = 2302
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 97 LEPDTYYDNIEINEADEEALKLF 165
LE + Y+D +INE E L+L+
Sbjct: 474 LEAENYHDQAKINERKENVLQLW 496
>AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin
protein.
Length = 2257
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 97 LEPDTYYDNIEINEADEEALKLF 165
LE + Y+D +INE E L+L+
Sbjct: 474 LEAENYHDQAKINERKENVLQLW 496
>AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2257
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 97 LEPDTYYDNIEINEADEEALKLF 165
LE + Y+D +INE E L+L+
Sbjct: 474 LEAENYHDQAKINERKENVLQLW 496
>AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2302
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 97 LEPDTYYDNIEINEADEEALKLF 165
LE + Y+D +INE E L+L+
Sbjct: 474 LEAENYHDQAKINERKENVLQLW 496
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 181 ERVRTLADIIKEKITDKHTELQTQFSDA 264
ERV+ L D++KEK DK L+ D+
Sbjct: 896 ERVQKLEDVVKEK-EDKEIALRRDLEDS 922
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 181 ERVRTLADIIKEKITDKHTELQTQFSDA 264
ERV+ L D++KEK DK L+ D+
Sbjct: 896 ERVQKLEDVVKEK-EDKEIALRRDLEDS 922
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 181 ERVRTLADIIKEKITDKHTELQTQFSDA 264
ERV+ L D++KEK DK L+ D+
Sbjct: 656 ERVQKLEDVVKEK-EDKEIALRRDLEDS 682
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 181 ERVRTLADIIKEKITDKHTELQTQFSDA 264
ERV+ L D++KEK DK L+ D+
Sbjct: 896 ERVQKLEDVVKEK-EDKEIALRRDLEDS 922
>U41544-1|AAA83183.2| 2275|Caenorhabditis elegans Hypothetical protein
M03A8.2 protein.
Length = 2275
Score = 24.6 bits (51), Expect = 9.8
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 109 TYYDNIEINEADEEALKLFKSSKTERV 189
T ++ I I +EE+ +L KS+KT+ +
Sbjct: 1288 TSHEQIPIKTPEEESQELMKSTKTDDI 1314
>AF016669-2|AAB66099.2| 455|Caenorhabditis elegans Hypothetical
protein K10G6.4 protein.
Length = 455
Score = 24.6 bits (51), Expect = 9.8
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 124 IEINEADEEALKLFKSSKTERVRTLADIIKEKITDKHTELQ 246
+E+ ++ LK +K +RV + ++ KI D H E+Q
Sbjct: 153 VEMRMKYDQKLKDIVMNKEKRVSPRFEHLEHKIEDLHAEIQ 193
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.308 0.128 0.340
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,636,207
Number of Sequences: 27780
Number of extensions: 39193
Number of successful extensions: 185
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 185
length of database: 12,740,198
effective HSP length: 66
effective length of database: 10,906,718
effective search space used: 229041078
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
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