Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20g09
         (591 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0713 - 31402534-31403131,31403281-31403430,31403526-31403728     30   1.2  
07_03_0205 + 15167902-15168019,15168107-15168162,15168349-151684...    29   2.8  
07_01_0627 + 4685077-4685155,4685978-4686336,4686761-4686862,468...    29   3.7  
05_03_0039 - 7621613-7622695                                           29   3.7  
02_04_0660 + 24799959-24800076,24800597-24800652,24800864-248009...    28   4.8  
01_06_0287 + 28224956-28225216,28225385-28225641,28225789-282258...    28   6.4  
06_01_0081 + 646100-646346,646432-646848,647067-647170,648152-64...    27   8.5  
03_02_1008 - 13170630-13171481                                         27   8.5  

>01_06_0713 - 31402534-31403131,31403281-31403430,31403526-31403728
          Length = 316

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = +3

Query: 84  EAATHESVQADLPEPENE-DSEPRIRPLERIKLHPKYPIEPSA 209
           E  +  S + ++PEPE E +SEP ++  E  K   K  +EP+A
Sbjct: 192 ENESSASAELEVPEPEPEQESEPVVKQEEEQKEEQKAVVEPAA 234


>07_03_0205 +
           15167902-15168019,15168107-15168162,15168349-15168479,
           15168567-15168702,15169145-15169303,15169363-15169431
          Length = 222

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +1

Query: 379 MKSSKSWLLHNPFLNIARNTMPITSKMSSSLEIWK 483
           +KS    +L  PFL + ++ +P+  K  S++ I K
Sbjct: 16  VKSESGVILTKPFLEVCKHILPVLDKFGSAMSIVK 50


>07_01_0627 +
           4685077-4685155,4685978-4686336,4686761-4686862,
           4687528-4687598,4687871-4687989,4688327-4688422,
           4688527-4688636,4688734-4688814,4689124-4689224,
           4689663-4689771,4689971-4690076,4690140-4690225,
           4690324-4690449,4690816-4690902
          Length = 543

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 9/31 (29%), Positives = 19/31 (61%)
 Frame = +1

Query: 244 YYKMDEQFRELAAKCGKIIKYQKDLPIQKVY 336
           ++++ E   E + K G + KY   +P++K+Y
Sbjct: 404 FWRIREGISEASVKVGAVYKYDLSIPVEKLY 434


>05_03_0039 - 7621613-7622695
          Length = 360

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
 Frame = +3

Query: 120 PEPENEDS-EPRIRPLERIKLHPKYPIEPSAYGKGKNFSRPWILQDGRTVPGIGSEMREN 296
           PEP+ +   EP+  P    K  PK   EP  Y K K   +P    + +  P    E +  
Sbjct: 124 PEPKPKPKPEPKPEPKPEHKPEPKPEPEPKPYPKPKPEPKPGPKPEPKPEPKPHPEPKPE 183

Query: 297 YQIPKRPPHTE 329
            + PK  PH E
Sbjct: 184 PK-PKPVPHPE 193


>02_04_0660 +
           24799959-24800076,24800597-24800652,24800864-24800954,
           24801463-24801515,24801626-24801757,24801847-24801882
          Length = 161

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 10/35 (28%), Positives = 21/35 (60%)
 Frame = +1

Query: 379 MKSSKSWLLHNPFLNIARNTMPITSKMSSSLEIWK 483
           +KS  S +L  PFL++ +  +P+  K  +++ + K
Sbjct: 16  VKSESSVILTKPFLDVCKQILPVLDKFGAAMALVK 50


>01_06_0287 +
           28224956-28225216,28225385-28225641,28225789-28225899,
           28225926-28226021,28226078-28226134,28226348-28226438,
           28226610-28226678,28227091-28227180,28227390-28227440,
           28227535-28227753,28228064-28228127,28228211-28228299
          Length = 484

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 10/33 (30%), Positives = 21/33 (63%)
 Frame = +1

Query: 397 WLLHNPFLNIARNTMPITSKMSSSLEIWKWLQI 495
           +LL N  + + R  MP+T++++   + +KWL +
Sbjct: 223 YLLSNLRIRLGRKWMPMTNRLNDIQQSYKWLLV 255


>06_01_0081 +
           646100-646346,646432-646848,647067-647170,648152-648352,
           649088-649798,649944-650674,650942-651017,651096-651182,
           651429-651517,651917-651973,652402-652510,652590-652649,
           652835-652919,653178-653242,653694-653753,653869-653913,
           654697-654800,654877-655099
          Length = 1156

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 12/48 (25%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
 Frame = -2

Query: 545 NCARARTVKWIFQVHILICSH----FQISRLELIFDVIGIVFRAIFRN 414
           N    R +KW+   ++L+C+     + ISR+ L+  ++ I+  ++ +N
Sbjct: 233 NICYQRNIKWLMFFYLLLCNFLFKAYGISRMNLVPSLMEIILPSLEKN 280


>03_02_1008 - 13170630-13171481
          Length = 283

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 18/56 (32%), Positives = 30/56 (53%)
 Frame = +3

Query: 231 SRPWILQDGRTVPGIGSEMRENYQIPKRPPHTEGIRKRMLTDFFWEQMLDEVIEEL 398
           S PW+L  G+ +PG  SE    + +        G+R+  + D+F    LD++IE+L
Sbjct: 99  SGPWLLFRGQ-LPGHLSE-DNGFDVFINGRRGVGMRRANIADYFVGPGLDDLIEQL 152


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,892,185
Number of Sequences: 37544
Number of extensions: 362021
Number of successful extensions: 922
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 922
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1400060088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)