Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20g09
         (591 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF045642-6|AAC02590.1|  632|Caenorhabditis elegans Hypothetical ...    31   0.81 
Z75714-8|CAB00061.1|  471|Caenorhabditis elegans Hypothetical pr...    28   4.3  
U58735-3|AAC48143.1|  337|Caenorhabditis elegans Hypothetical pr...    28   4.3  
U39676-5|AAN60531.1| 2329|Caenorhabditis elegans Hypothetical pr...    28   4.3  
U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical pr...    28   4.3  
U40800-9|AAA81494.1|  316|Caenorhabditis elegans Hypothetical pr...    28   5.7  
AL117206-1|CAB60446.1|  644|Caenorhabditis elegans Hypothetical ...    28   5.7  

>AF045642-6|AAC02590.1|  632|Caenorhabditis elegans Hypothetical
           protein C17H12.12 protein.
          Length = 632

 Score = 30.7 bits (66), Expect = 0.81
 Identities = 12/41 (29%), Positives = 24/41 (58%)
 Frame = -2

Query: 413 GL*SSQLFDDFI*HLFPKEVREHTLTYTFCMGRSFWYLIIF 291
           G+  S +FD +  H+F + +R+H   +   + +SF ++I F
Sbjct: 259 GIIQSLVFDRYTSHVFVERIRQHAYMFVTDLHQSFKFMIFF 299


>Z75714-8|CAB00061.1|  471|Caenorhabditis elegans Hypothetical
           protein ZC434.7a protein.
          Length = 471

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 11/42 (26%), Positives = 21/42 (50%)
 Frame = +1

Query: 250 KMDEQFRELAAKCGKIIKYQKDLPIQKVYVSVCSRTSFGNKC 375
           + DE F+++A  C   +  + +L ++K Y+S         KC
Sbjct: 230 EFDEIFKQVAEACSAKVSVKSELDVKKTYISEKEGKILKEKC 271


>U58735-3|AAC48143.1|  337|Caenorhabditis elegans Hypothetical
           protein F20B4.2 protein.
          Length = 337

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 14/51 (27%), Positives = 27/51 (52%)
 Frame = +1

Query: 85  RLLRMKVFKPIYLNQKMKIVNLESDHWKGLSSTLNIP*SHLLMERERTSVD 237
           R  R K  +  YL+   ++++L++  ++GLS +LN P    +   + T  D
Sbjct: 129 RTARFKANEKCYLHSVCQLISLKNPTFQGLSHSLNSPGDKKVAAEKHTCED 179


>U39676-5|AAN60531.1| 2329|Caenorhabditis elegans Hypothetical
           protein C23F12.1a protein.
          Length = 2329

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 23/72 (31%), Positives = 30/72 (41%)
 Frame = +3

Query: 57  RVAHFSKTMEAATHESVQADLPEPENEDSEPRIRPLERIKLHPKYPIEPSAYGKGKNFSR 236
           R A F  T E      +QA +  P+N +   RI P    K   +Y IE      G++   
Sbjct: 84  RTAQFDITGEGLELSDIQAKISGPDNREYPIRIIPRSSGKYTAEYEIEQ----VGEHHLT 139

Query: 237 PWILQDGRTVPG 272
            WI   GR V G
Sbjct: 140 VWIA--GRKVDG 149


>U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical
           protein C23F12.1b protein.
          Length = 2747

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 23/72 (31%), Positives = 30/72 (41%)
 Frame = +3

Query: 57  RVAHFSKTMEAATHESVQADLPEPENEDSEPRIRPLERIKLHPKYPIEPSAYGKGKNFSR 236
           R A F  T E      +QA +  P+N +   RI P    K   +Y IE      G++   
Sbjct: 84  RTAQFDITGEGLELSDIQAKISGPDNREYPIRIIPRSSGKYTAEYEIEQ----VGEHHLT 139

Query: 237 PWILQDGRTVPG 272
            WI   GR V G
Sbjct: 140 VWIA--GRKVDG 149


>U40800-9|AAA81494.1|  316|Caenorhabditis elegans Hypothetical
           protein D2096.8 protein.
          Length = 316

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 17/61 (27%), Positives = 27/61 (44%)
 Frame = +3

Query: 276 GSEMRENYQIPKRPPHTEGIRKRMLTDFFWEQMLDEVIEELATSQPVSEYCTEYDANYIK 455
           G ++ E Y+  +  P  +GI+   LT      ++ E IEE     P+  Y T+      K
Sbjct: 94  GDQLAELYKAAEADPSAKGIKDFWLTALRTHDLVAEAIEE--HDVPILSYLTDVTTAASK 151

Query: 456 D 458
           D
Sbjct: 152 D 152


>AL117206-1|CAB60446.1|  644|Caenorhabditis elegans Hypothetical
           protein Y67A10A.1 protein.
          Length = 644

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -1

Query: 333 YLLYGEVFLVFDNFPAFRCQFPELFVHLVISRVD 232
           Y  Y +   + D FP F   F  LF+H  ++R D
Sbjct: 524 YEKYVKKLYILDAFPEFHENFLNLFLHYAVTRPD 557


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,451,076
Number of Sequences: 27780
Number of extensions: 313706
Number of successful extensions: 993
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 991
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)