Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20g07
(248 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein Ubi2|... 134 2e-33
SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein Ubi1|Schiz... 134 2e-33
SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein Ubi3|Schi... 134 2e-33
SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr 2|||M... 134 2e-33
SPAC589.10c |||ribomal-ubiquitin fusion protein Ubi5|Schizosacch... 134 2e-33
SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like pro... 79 1e-16
SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase Ubp6|Schizosacc... 41 3e-05
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 38 3e-04
SPBC418.01c |his4|SPBC887.20c|imidazoleglycerol-phosphate syntha... 26 0.84
SPAC31G5.13 |rpn11|pad1, sks1, bfr2, mts5|19S proteasome regulat... 25 1.9
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 25 1.9
SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomy... 24 2.6
SPAC14C4.09 |agn1||glucan endo-1,3-alpha-glucosidase Agn1|Schizo... 23 4.5
SPCC4G3.19 |alp16||gamma tubulin complex subunit Alp16 |Schizosa... 23 4.5
SPAC22A12.13 |mug84||pig-P |Schizosaccharomyces pombe|chr 1|||Ma... 23 4.5
SPBC1861.04c |||RNA-binding protein Prp24|Schizosaccharomyces po... 23 4.5
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 23 5.9
SPBC1289.08 |||UDP-N-acetylglucosamine diphosphorylase |Schizosa... 23 5.9
SPAPYUG7.02c |sin1||stress activated MAP kinase interacting prot... 23 5.9
SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1 |Schizosaccharom... 23 5.9
SPCC1753.02c |git3||G-protein coupled receptor Git3|Schizosaccha... 23 7.8
SPAC1783.01 |||FAD binding protein|Schizosaccharomyces pombe|chr... 23 7.8
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 23 7.8
>SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein
Ubi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 134 bits (324), Expect = 2e-33
Identities = 65/71 (91%), Positives = 68/71 (95%)
Frame = +2
Query: 35 MQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXN 214
MQ FVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGR LSD N
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 215 IQKESTLHLVL 247
IQKESTLHLVL
Sbjct: 61 IQKESTLHLVL 71
>SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein
Ubi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 134 bits (324), Expect = 2e-33
Identities = 65/71 (91%), Positives = 68/71 (95%)
Frame = +2
Query: 35 MQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXN 214
MQ FVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGR LSD N
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 215 IQKESTLHLVL 247
IQKESTLHLVL
Sbjct: 61 IQKESTLHLVL 71
>SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein
Ubi3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 134 bits (324), Expect = 2e-33
Identities = 65/71 (91%), Positives = 68/71 (95%)
Frame = +2
Query: 35 MQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXN 214
MQ FVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGR LSD N
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 215 IQKESTLHLVL 247
IQKESTLHLVL
Sbjct: 61 IQKESTLHLVL 71
>SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 382
Score = 134 bits (324), Expect = 2e-33
Identities = 65/71 (91%), Positives = 68/71 (95%)
Frame = +2
Query: 35 MQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXN 214
MQ FVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGR LSD N
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 215 IQKESTLHLVL 247
IQKESTLHLVL
Sbjct: 61 IQKESTLHLVL 71
Score = 134 bits (324), Expect = 2e-33
Identities = 65/71 (91%), Positives = 68/71 (95%)
Frame = +2
Query: 35 MQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXN 214
MQ FVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGR LSD N
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 215 IQKESTLHLVL 247
IQKESTLHLVL
Sbjct: 137 IQKESTLHLVL 147
Score = 134 bits (324), Expect = 2e-33
Identities = 65/71 (91%), Positives = 68/71 (95%)
Frame = +2
Query: 35 MQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXN 214
MQ FVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGR LSD N
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 215 IQKESTLHLVL 247
IQKESTLHLVL
Sbjct: 213 IQKESTLHLVL 223
Score = 134 bits (324), Expect = 2e-33
Identities = 65/71 (91%), Positives = 68/71 (95%)
Frame = +2
Query: 35 MQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXN 214
MQ FVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGR LSD N
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 215 IQKESTLHLVL 247
IQKESTLHLVL
Sbjct: 289 IQKESTLHLVL 299
Score = 134 bits (324), Expect = 2e-33
Identities = 65/71 (91%), Positives = 68/71 (95%)
Frame = +2
Query: 35 MQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXN 214
MQ FVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGR LSD N
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 215 IQKESTLHLVL 247
IQKESTLHLVL
Sbjct: 365 IQKESTLHLVL 375
>SPAC589.10c |||ribomal-ubiquitin fusion protein
Ubi5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 134 bits (324), Expect = 2e-33
Identities = 65/71 (91%), Positives = 68/71 (95%)
Frame = +2
Query: 35 MQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXN 214
MQ FVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGR LSD N
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 215 IQKESTLHLVL 247
IQKESTLHLVL
Sbjct: 61 IQKESTLHLVL 71
>SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like
protein modifier Ned8|Schizosaccharomyces pombe|chr
2|||Manual
Length = 78
Score = 78.6 bits (185), Expect = 1e-16
Identities = 33/67 (49%), Positives = 49/67 (73%)
Frame = +2
Query: 47 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXNIQKE 226
VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AGKQ+ D + +++
Sbjct: 5 VKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYHLEGG 64
Query: 227 STLHLVL 247
S LHLVL
Sbjct: 65 SVLHLVL 71
>SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase
Ubp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 40.7 bits (91), Expect = 3e-05
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +2
Query: 62 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXNIQKESTL 235
GK LE+E ++T +K ++ +PP++Q++I G QL+D L I+ +TL
Sbjct: 10 GKKYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSVGIKPNATL 67
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 37.5 bits (83), Expect = 3e-04
Identities = 19/66 (28%), Positives = 34/66 (51%)
Frame = +2
Query: 47 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXNIQKE 226
+K + + V++ ++ +K I I ++QRLI+AG+ L+D L IQ
Sbjct: 8 IKAANDQKYAVTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKTYKIQDG 67
Query: 227 STLHLV 244
++HLV
Sbjct: 68 HSIHLV 73
>SPBC418.01c |his4|SPBC887.20c|imidazoleglycerol-phosphate
synthase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 541
Score = 25.8 bits (54), Expect = 0.84
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 109 IFDSVGSFHLQCNGLPRKGFDEXL 38
IF VG+F C+ L ++GF E L
Sbjct: 43 IFPGVGNFGFVCDSLAKQGFLEPL 66
>SPAC31G5.13 |rpn11|pad1, sks1, bfr2, mts5|19S proteasome regulatory
subunit Rpn11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 308
Score = 24.6 bits (51), Expect = 1.9
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +2
Query: 104 ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXNIQK 223
E ++Q++ + P+Q R+ + GKQ D + D +QK
Sbjct: 252 EQYTERVQNEVTLSPEQLRIQYVGKQ--DPKKHLDAEVQK 289
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 24.6 bits (51), Expect = 1.9
Identities = 12/50 (24%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +2
Query: 2 LSKHVFHXSNTMQXFVKTLTGKTITLE-VEASDTIENVKAKIQDKEGIPP 148
LSK VF+ + + T+ G +++E V+ ++ N + + +PP
Sbjct: 346 LSKRVFYSVYVLACYTSTIVGLPLSIEDVDIDQSLPNSFDFTLENDQVPP 395
>SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 603
Score = 24.2 bits (50), Expect = 2.6
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +2
Query: 47 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSD--XNIQ 220
V T+ K +V + T+ +K I P D+ +LI AG+ L + L + +
Sbjct: 8 VTTVDQKVGIFQVPRTKTVLELKELIAVTFEAPADRLKLIHAGRVLRNETPLEEILHDAT 67
Query: 221 KESTLHLVL 247
T HLV+
Sbjct: 68 DLVTFHLVI 76
>SPAC14C4.09 |agn1||glucan endo-1,3-alpha-glucosidase
Agn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 424
Score = 23.4 bits (48), Expect = 4.5
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 52 NPYGEDHYIG 81
N YGE HYIG
Sbjct: 258 NDYGESHYIG 267
>SPCC4G3.19 |alp16||gamma tubulin complex subunit Alp16
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 759
Score = 23.4 bits (48), Expect = 4.5
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2
Query: 145 RNTFLVLDFSFDIFDSVGSFH 83
R+T+ VL F +FD + FH
Sbjct: 512 RSTYKVLKNDFQVFDLLNFFH 532
>SPAC22A12.13 |mug84||pig-P |Schizosaccharomyces pombe|chr
1|||Manual
Length = 120
Score = 23.4 bits (48), Expect = 4.5
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -3
Query: 165 MRRCWSGGIPSLSWILALTFSIVSEASTSNVMVFPVRVLTNXCIV 31
+ R W+ IP+ ++L + +V A + V+ P L CIV
Sbjct: 45 LSRWWALAIPTWLFVLVIYIHVVLNAYNTEVLTKPFSSL--ECIV 87
>SPBC1861.04c |||RNA-binding protein Prp24|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1014
Score = 23.4 bits (48), Expect = 4.5
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -3
Query: 162 RRC-WSGGIPSLSWILALTFSIVSEASTSNVMVFPVRVLTNXCIV 31
R C W G I W + LT+ +S ASTS V R L + +V
Sbjct: 335 RNCSWIGRI----WSIKLTYMTLSGASTSAVCEEKDRCLNSNLLV 375
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 23.0 bits (47), Expect = 5.9
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 176 KQLEDGRXLSDXNIQKESTL 235
KQL+DG+ +SD E TL
Sbjct: 4366 KQLQDGQDISDIKQTGEDTL 4385
>SPBC1289.08 |||UDP-N-acetylglucosamine diphosphorylase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 475
Score = 23.0 bits (47), Expect = 5.9
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -2
Query: 142 NTFLVLDFSFDIFDSVGSFHLQCNGLPRK 56
N + + F FD+F SV + C +PR+
Sbjct: 375 NGYKLESFIFDLFPSVSVENFGCFQVPRR 403
>SPAPYUG7.02c |sin1||stress activated MAP kinase interacting protein
Sin1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 23.0 bits (47), Expect = 5.9
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = +2
Query: 83 VEASDTIENVKAKIQDKEG 139
++ + T+E VK K++DK+G
Sbjct: 503 LDGNPTLELVKKKVRDKKG 521
>SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 834
Score = 23.0 bits (47), Expect = 5.9
Identities = 10/31 (32%), Positives = 11/31 (35%)
Frame = +1
Query: 13 RFSXEQHNAXIRQNPYGEDHYIGGGSFRHYR 105
+ E HN I N Y D Y YR
Sbjct: 22 KIENEYHNNTIGLNGYSVDEYFDANDSNRYR 52
>SPCC1753.02c |git3||G-protein coupled receptor
Git3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 466
Score = 22.6 bits (46), Expect = 7.8
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -3
Query: 120 LALTFSIVSEASTSNVMVFPVRVLTNXCIVLL 25
L TF++ STS++++ R L N I+++
Sbjct: 4 LDYTFNVSDATSTSSIIIVSRRELANLRIMVI 35
>SPAC1783.01 |||FAD binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 583
Score = 22.6 bits (46), Expect = 7.8
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 239 GEVWILSGCXSXK 201
G+VWI+ GC K
Sbjct: 459 GKVWIIQGCRDQK 471
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 22.6 bits (46), Expect = 7.8
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -3
Query: 138 PSLSWILALTFSIVSEASTSNVMVFPVRVLT 46
PSLS + + SI SEASTSN + VL+
Sbjct: 3803 PSLSETIPQSSSI-SEASTSNPNILSSTVLS 3832
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,033,960
Number of Sequences: 5004
Number of extensions: 17279
Number of successful extensions: 61
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 61
length of database: 2,362,478
effective HSP length: 60
effective length of database: 2,062,238
effective search space used: 45369236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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