Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20g07
(248 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 138 6e-34
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 138 6e-34
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 138 6e-34
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 138 6e-34
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 138 6e-34
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 85 5e-18
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 79 4e-16
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 75 9e-15
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 60 3e-10
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 60 3e-10
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 50 2e-07
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 44 1e-05
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 44 1e-05
AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical ... 40 3e-04
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 38 0.001
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 36 0.005
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 35 0.007
Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical pr... 34 0.012
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 33 0.020
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 32 0.062
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 32 0.062
L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr... 31 0.082
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr... 31 0.082
AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical ... 31 0.11
Z99281-7|CAC42379.1| 77|Caenorhabditis elegans Hypothetical pr... 28 1.0
Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical pr... 28 1.0
Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical pr... 28 1.0
U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical pr... 27 1.8
AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical... 27 1.8
AF003130-4|AAB54126.1| 1043|Caenorhabditis elegans Hypothetical ... 27 2.3
Z19156-2|CAE17940.2| 275|Caenorhabditis elegans Hypothetical pr... 26 3.1
Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical pr... 25 5.4
AF125459-12|AAD12832.1| 533|Caenorhabditis elegans Hypothetical... 25 7.1
Z49068-10|CAA88858.1| 296|Caenorhabditis elegans Hypothetical p... 25 9.4
U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein ... 25 9.4
U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein ... 25 9.4
U80454-4|AAB37876.3| 896|Caenorhabditis elegans Prion-like-(q/n... 25 9.4
AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain pro... 25 9.4
AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain pro... 25 9.4
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 138 bits (333), Expect = 6e-34
Identities = 68/71 (95%), Positives = 68/71 (95%)
Frame = +2
Query: 35 MQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXN 214
MQ FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR LSD N
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 215 IQKESTLHLVL 247
IQKESTLHLVL
Sbjct: 61 IQKESTLHLVL 71
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 138 bits (333), Expect = 6e-34
Identities = 68/71 (95%), Positives = 68/71 (95%)
Frame = +2
Query: 35 MQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXN 214
MQ FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR LSD N
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 215 IQKESTLHLVL 247
IQKESTLHLVL
Sbjct: 61 IQKESTLHLVL 71
Score = 138 bits (333), Expect = 6e-34
Identities = 68/71 (95%), Positives = 68/71 (95%)
Frame = +2
Query: 35 MQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXN 214
MQ FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR LSD N
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 215 IQKESTLHLVL 247
IQKESTLHLVL
Sbjct: 137 IQKESTLHLVL 147
Score = 138 bits (333), Expect = 6e-34
Identities = 68/71 (95%), Positives = 68/71 (95%)
Frame = +2
Query: 35 MQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXN 214
MQ FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR LSD N
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 215 IQKESTLHLVL 247
IQKESTLHLVL
Sbjct: 213 IQKESTLHLVL 223
Score = 138 bits (333), Expect = 6e-34
Identities = 68/71 (95%), Positives = 68/71 (95%)
Frame = +2
Query: 35 MQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXN 214
MQ FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR LSD N
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 215 IQKESTLHLVL 247
IQKESTLHLVL
Sbjct: 289 IQKESTLHLVL 299
Score = 138 bits (333), Expect = 6e-34
Identities = 68/71 (95%), Positives = 68/71 (95%)
Frame = +2
Query: 35 MQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXN 214
MQ FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR LSD N
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 215 IQKESTLHLVL 247
IQKESTLHLVL
Sbjct: 365 IQKESTLHLVL 375
Score = 135 bits (327), Expect = 3e-33
Identities = 67/71 (94%), Positives = 67/71 (94%)
Frame = +2
Query: 35 MQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXN 214
MQ FVKTL GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR LSD N
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 215 IQKESTLHLVL 247
IQKESTLHLVL
Sbjct: 441 IQKESTLHLVL 451
Score = 95.5 bits (227), Expect = 4e-21
Identities = 46/47 (97%), Positives = 46/47 (97%)
Frame = +2
Query: 35 MQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 175
MQ FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 138 bits (333), Expect = 6e-34
Identities = 68/71 (95%), Positives = 68/71 (95%)
Frame = +2
Query: 35 MQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXN 214
MQ FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR LSD N
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 215 IQKESTLHLVL 247
IQKESTLHLVL
Sbjct: 61 IQKESTLHLVL 71
Score = 138 bits (333), Expect = 6e-34
Identities = 68/71 (95%), Positives = 68/71 (95%)
Frame = +2
Query: 35 MQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXN 214
MQ FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR LSD N
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 215 IQKESTLHLVL 247
IQKESTLHLVL
Sbjct: 137 IQKESTLHLVL 147
Score = 138 bits (333), Expect = 6e-34
Identities = 68/71 (95%), Positives = 68/71 (95%)
Frame = +2
Query: 35 MQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXN 214
MQ FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR LSD N
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 215 IQKESTLHLVL 247
IQKESTLHLVL
Sbjct: 213 IQKESTLHLVL 223
Score = 138 bits (333), Expect = 6e-34
Identities = 68/71 (95%), Positives = 68/71 (95%)
Frame = +2
Query: 35 MQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXN 214
MQ FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR LSD N
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 215 IQKESTLHLVL 247
IQKESTLHLVL
Sbjct: 289 IQKESTLHLVL 299
Score = 138 bits (333), Expect = 6e-34
Identities = 68/71 (95%), Positives = 68/71 (95%)
Frame = +2
Query: 35 MQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXN 214
MQ FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR LSD N
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 215 IQKESTLHLVL 247
IQKESTLHLVL
Sbjct: 365 IQKESTLHLVL 375
Score = 138 bits (333), Expect = 6e-34
Identities = 68/71 (95%), Positives = 68/71 (95%)
Frame = +2
Query: 35 MQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXN 214
MQ FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR LSD N
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 215 IQKESTLHLVL 247
IQKESTLHLVL
Sbjct: 517 IQKESTLHLVL 527
Score = 138 bits (333), Expect = 6e-34
Identities = 68/71 (95%), Positives = 68/71 (95%)
Frame = +2
Query: 35 MQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXN 214
MQ FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR LSD N
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 215 IQKESTLHLVL 247
IQKESTLHLVL
Sbjct: 593 IQKESTLHLVL 603
Score = 138 bits (333), Expect = 6e-34
Identities = 68/71 (95%), Positives = 68/71 (95%)
Frame = +2
Query: 35 MQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXN 214
MQ FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR LSD N
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 215 IQKESTLHLVL 247
IQKESTLHLVL
Sbjct: 669 IQKESTLHLVL 679
Score = 138 bits (333), Expect = 6e-34
Identities = 68/71 (95%), Positives = 68/71 (95%)
Frame = +2
Query: 35 MQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXN 214
MQ FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR LSD N
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 215 IQKESTLHLVL 247
IQKESTLHLVL
Sbjct: 745 IQKESTLHLVL 755
Score = 138 bits (333), Expect = 6e-34
Identities = 68/71 (95%), Positives = 68/71 (95%)
Frame = +2
Query: 35 MQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXN 214
MQ FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR LSD N
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 215 IQKESTLHLVL 247
IQKESTLHLVL
Sbjct: 821 IQKESTLHLVL 831
Score = 135 bits (327), Expect = 3e-33
Identities = 67/71 (94%), Positives = 67/71 (94%)
Frame = +2
Query: 35 MQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXN 214
MQ FVKTL GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR LSD N
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 215 IQKESTLHLVL 247
IQKESTLHLVL
Sbjct: 441 IQKESTLHLVL 451
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 138 bits (333), Expect = 6e-34
Identities = 68/71 (95%), Positives = 68/71 (95%)
Frame = +2
Query: 35 MQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXN 214
MQ FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR LSD N
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 215 IQKESTLHLVL 247
IQKESTLHLVL
Sbjct: 61 IQKESTLHLVL 71
Score = 138 bits (333), Expect = 6e-34
Identities = 68/71 (95%), Positives = 68/71 (95%)
Frame = +2
Query: 35 MQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXN 214
MQ FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR LSD N
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 215 IQKESTLHLVL 247
IQKESTLHLVL
Sbjct: 137 IQKESTLHLVL 147
Score = 138 bits (333), Expect = 6e-34
Identities = 68/71 (95%), Positives = 68/71 (95%)
Frame = +2
Query: 35 MQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXN 214
MQ FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR LSD N
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 215 IQKESTLHLVL 247
IQKESTLHLVL
Sbjct: 213 IQKESTLHLVL 223
Score = 138 bits (333), Expect = 6e-34
Identities = 68/71 (95%), Positives = 68/71 (95%)
Frame = +2
Query: 35 MQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXN 214
MQ FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR LSD N
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 215 IQKESTLHLVL 247
IQKESTLHLVL
Sbjct: 289 IQKESTLHLVL 299
Score = 138 bits (333), Expect = 6e-34
Identities = 68/71 (95%), Positives = 68/71 (95%)
Frame = +2
Query: 35 MQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXN 214
MQ FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR LSD N
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 215 IQKESTLHLVL 247
IQKESTLHLVL
Sbjct: 365 IQKESTLHLVL 375
Score = 138 bits (333), Expect = 6e-34
Identities = 68/71 (95%), Positives = 68/71 (95%)
Frame = +2
Query: 35 MQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXN 214
MQ FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR LSD N
Sbjct: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 215 IQKESTLHLVL 247
IQKESTLHLVL
Sbjct: 441 IQKESTLHLVL 451
Score = 138 bits (333), Expect = 6e-34
Identities = 68/71 (95%), Positives = 68/71 (95%)
Frame = +2
Query: 35 MQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXN 214
MQ FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR LSD N
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 215 IQKESTLHLVL 247
IQKESTLHLVL
Sbjct: 517 IQKESTLHLVL 527
Score = 138 bits (333), Expect = 6e-34
Identities = 68/71 (95%), Positives = 68/71 (95%)
Frame = +2
Query: 35 MQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXN 214
MQ FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR LSD N
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 215 IQKESTLHLVL 247
IQKESTLHLVL
Sbjct: 593 IQKESTLHLVL 603
Score = 138 bits (333), Expect = 6e-34
Identities = 68/71 (95%), Positives = 68/71 (95%)
Frame = +2
Query: 35 MQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXN 214
MQ FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR LSD N
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 215 IQKESTLHLVL 247
IQKESTLHLVL
Sbjct: 669 IQKESTLHLVL 679
Score = 138 bits (333), Expect = 6e-34
Identities = 68/71 (95%), Positives = 68/71 (95%)
Frame = +2
Query: 35 MQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXN 214
MQ FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR LSD N
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 215 IQKESTLHLVL 247
IQKESTLHLVL
Sbjct: 745 IQKESTLHLVL 755
Score = 136 bits (330), Expect = 1e-33
Identities = 67/71 (94%), Positives = 68/71 (95%)
Frame = +2
Query: 35 MQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXN 214
MQ FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR LSD N
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 215 IQKESTLHLVL 247
IQK+STLHLVL
Sbjct: 821 IQKQSTLHLVL 831
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 138 bits (333), Expect = 6e-34
Identities = 68/71 (95%), Positives = 68/71 (95%)
Frame = +2
Query: 35 MQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXN 214
MQ FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR LSD N
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 215 IQKESTLHLVL 247
IQKESTLHLVL
Sbjct: 61 IQKESTLHLVL 71
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 85.4 bits (202), Expect = 5e-18
Identities = 38/67 (56%), Positives = 50/67 (74%)
Frame = +2
Query: 47 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXNIQKE 226
VKTLTGK I L++E +D +E +K K+++KEGIPP QQRLIFAGKQ+ D + +D +
Sbjct: 5 VKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGG 64
Query: 227 STLHLVL 247
S LHLVL
Sbjct: 65 SVLHLVL 71
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 79.0 bits (186), Expect = 4e-16
Identities = 36/66 (54%), Positives = 48/66 (72%)
Frame = +2
Query: 47 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXNIQKE 226
VKTL GKTI + ++ +DT+E +K K+Q+K G+PPDQQRLIF QLE+ R L NI+ E
Sbjct: 165 VKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAYNIRDE 224
Query: 227 STLHLV 244
+HLV
Sbjct: 225 DIIHLV 230
Score = 36.3 bits (80), Expect = 0.003
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +2
Query: 26 SNTMQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGI 142
S TM VKT TGKTIT+E +NVK +++DK+G+
Sbjct: 56 SKTMLLSVKTSTGKTITVEAP-----KNVKTEVRDKQGV 89
Score = 35.1 bits (77), Expect = 0.007
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = +2
Query: 56 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXNIQKESTL 235
+TG IT VEASD I+++ K+ + + P ++ +D R +SD NI+ STL
Sbjct: 98 VTGDPIT--VEASDAIKDLNFKVAEAQRKPHQPSNIVLC----KDQRTISDYNIKNGSTL 151
Query: 236 HL 241
L
Sbjct: 152 RL 153
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 74.5 bits (175), Expect = 9e-15
Identities = 36/37 (97%), Positives = 36/37 (97%)
Frame = +2
Query: 35 MQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 145
MQ FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 59.7 bits (138), Expect = 3e-10
Identities = 32/68 (47%), Positives = 48/68 (70%)
Frame = +2
Query: 44 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXNIQK 223
FVKTL +T+ LEV A++ + ++K KI+ EGIP ++QRL +AG+QLED SD I
Sbjct: 3 FVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGIDS 57
Query: 224 ESTLHLVL 247
E+T+++ L
Sbjct: 58 EATIYVNL 65
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 59.7 bits (138), Expect = 3e-10
Identities = 32/68 (47%), Positives = 48/68 (70%)
Frame = +2
Query: 44 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXNIQK 223
FVKTL +T+ LEV A++ + ++K KI+ EGIP ++QRL +AG+QLED SD I
Sbjct: 3 FVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGIDS 57
Query: 224 ESTLHLVL 247
E+T+++ L
Sbjct: 58 EATIYVNL 65
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 50.4 bits (115), Expect = 2e-07
Identities = 26/66 (39%), Positives = 38/66 (57%)
Frame = +2
Query: 38 QXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXNI 217
Q FVK L G + ++ DT+ ++K I+ + IP L F+GK+LED + D NI
Sbjct: 155 QIFVKVL-GVSYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDYNI 213
Query: 218 QKESTL 235
QK ST+
Sbjct: 214 QKSSTI 219
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 44.4 bits (100), Expect = 1e-05
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Frame = +2
Query: 62 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE---DGRXLSDXNIQKEST 232
G+T TL+ ASDT+ +VKAKI +K I P+ Q+L+ L+ D L D + + ST
Sbjct: 111 GRTCTLDTSASDTMASVKAKIWEKLRILPNTQKLLLENWDLDLFSDHSTLFDNSFENGST 170
Query: 233 LHL 241
L L
Sbjct: 171 LRL 173
Score = 28.7 bits (61), Expect = 0.58
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2
Query: 47 VKTLTGKTITLEVEASDTIENVKAKIQDKEGI 142
+KT TGK IT+E S VK +++DK+G+
Sbjct: 5 IKTSTGKNITVEAPKS-----VKTEVRDKQGV 31
Score = 25.8 bits (54), Expect = 4.1
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +2
Query: 44 FVKTLTGKTITLEV 85
FVKT TGKTIT+ +
Sbjct: 184 FVKTYTGKTITISI 197
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 44.0 bits (99), Expect = 1e-05
Identities = 21/45 (46%), Positives = 33/45 (73%)
Frame = +2
Query: 44 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 178
FVKTL +T+ LEV A++ + ++K KI+ EGIP ++QRL +A +
Sbjct: 3 FVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
>AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical
protein F14D2.11 protein.
Length = 110
Score = 39.5 bits (88), Expect = 3e-04
Identities = 26/68 (38%), Positives = 34/68 (50%)
Frame = +2
Query: 38 QXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXNI 217
Q FV+ L GKT TL V ASDT+E K ++ R+ + GK L D + NI
Sbjct: 44 QYFVR-LNGKTRTLNVNASDTVEQGKMQLCHN----ARSTRMSYGGKPLSDQITFGEYNI 98
Query: 218 QKESTLHL 241
ST+ L
Sbjct: 99 SNNSTMDL 106
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 37.9 bits (84), Expect = 0.001
Identities = 23/61 (37%), Positives = 29/61 (47%)
Frame = +2
Query: 59 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXNIQKESTLH 238
+G L V SDTI VK I + R++ K LED L+ NIQ+ STL
Sbjct: 181 SGNYRNLWVRGSDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTLG 240
Query: 239 L 241
L
Sbjct: 241 L 241
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 35.5 bits (78), Expect = 0.005
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +2
Query: 50 KTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLED 190
+TLT LE+ TI VKA + ++G P+ Q+LI+ GK L+D
Sbjct: 57 RTLTQVNFNLELNEDQTIAEVKALVASEKGDDYAPELQKLIYNGKILDD 105
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 35.1 bits (77), Expect = 0.007
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +2
Query: 77 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXNIQKESTLHL 241
L V SDTI ++K +I + R++ GK LED L+ NIQ+ + + L
Sbjct: 210 LRVCGSDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQEGALIWL 264
>Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical
protein K08E3.7 protein.
Length = 386
Score = 34.3 bits (75), Expect = 0.012
Identities = 15/65 (23%), Positives = 33/65 (50%)
Frame = +2
Query: 50 KTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXNIQKES 229
KT + +TL + + IE++ ++ IP D+ ++F GK+L + D ++ +
Sbjct: 13 KTGQRRNLTLNINITGNIEDLTKDVEKLTEIPSDELEVVFCGKKLSKSTIMRDLSLTPAT 72
Query: 230 TLHLV 244
+ L+
Sbjct: 73 QIMLL 77
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 33.5 bits (73), Expect = 0.020
Identities = 20/53 (37%), Positives = 26/53 (49%)
Frame = +2
Query: 77 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXNIQKESTL 235
L V SDTI +K +I GI R K LED L+ NI++ ST+
Sbjct: 176 LRVCGSDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 31.9 bits (69), Expect = 0.062
Identities = 13/62 (20%), Positives = 33/62 (53%)
Frame = +2
Query: 56 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXNIQKESTL 235
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + N+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 236 HL 241
+L
Sbjct: 644 YL 645
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 31.9 bits (69), Expect = 0.062
Identities = 13/62 (20%), Positives = 33/62 (53%)
Frame = +2
Query: 56 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXNIQKESTL 235
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + N+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 236 HL 241
+L
Sbjct: 644 YL 645
>L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical
protein ZK688.5b protein.
Length = 1595
Score = 31.5 bits (68), Expect = 0.082
Identities = 19/71 (26%), Positives = 35/71 (49%)
Frame = +2
Query: 32 TMQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDX 211
T++ +KTL + T+ + DTI+++ + + I QR+I G+ L + +
Sbjct: 20 TIRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQAA 79
Query: 212 NIQKESTLHLV 244
I T+HLV
Sbjct: 80 GISDGQTVHLV 90
>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical
protein ZK688.5a protein.
Length = 1620
Score = 31.5 bits (68), Expect = 0.082
Identities = 19/71 (26%), Positives = 35/71 (49%)
Frame = +2
Query: 32 TMQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDX 211
T++ +KTL + T+ + DTI+++ + + I QR+I G+ L + +
Sbjct: 20 TIRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQAA 79
Query: 212 NIQKESTLHLV 244
I T+HLV
Sbjct: 80 GISDGQTVHLV 90
>AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical
protein F54D10.7 protein.
Length = 264
Score = 31.1 bits (67), Expect = 0.11
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +2
Query: 56 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXNIQKESTL 235
L G I +E+++ DTI V + G+ +QRL+ K+L+ + L + I+ S +
Sbjct: 189 LHGSRIPMELDSLDTIYTVGMALLKHGGLALHRQRLMLNDKELQYNQTLEEAGIKDGSVI 248
>Z99281-7|CAC42379.1| 77|Caenorhabditis elegans Hypothetical
protein Y57G11C.9c protein.
Length = 77
Score = 27.9 bits (59), Expect = 1.0
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 52 NPYGEDHYIGGGSFRHYRKCQS*NPRQGRYSSRP 153
N YG +++ GGG FRH + N Y++ P
Sbjct: 5 NNYGYNNHRGGGGFRHNNYNNNNNNHHHHYNNLP 38
>Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical
protein Y57G11C.9b protein.
Length = 625
Score = 27.9 bits (59), Expect = 1.0
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 52 NPYGEDHYIGGGSFRHYRKCQS*NPRQGRYSSRP 153
N YG +++ GGG FRH + N Y++ P
Sbjct: 5 NNYGYNNHRGGGGFRHNNYNNNNNNHHHHYNNLP 38
>Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical
protein Y57G11C.9a protein.
Length = 553
Score = 27.9 bits (59), Expect = 1.0
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 52 NPYGEDHYIGGGSFRHYRKCQS*NPRQGRYSSRP 153
N YG +++ GGG FRH + N Y++ P
Sbjct: 5 NNYGYNNHRGGGGFRHNNYNNNNNNHHHHYNNLP 38
>U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical protein
F48E3.3 protein.
Length = 1493
Score = 27.1 bits (57), Expect = 1.8
Identities = 11/54 (20%), Positives = 28/54 (51%)
Frame = +2
Query: 29 NTMQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 190
+ +Q + + TGK++ + VE + +E D+EG+ L+ + ++ ++
Sbjct: 1147 DVLQVVIDSFTGKSVRVRVEKREGMEERNLLSDDEEGVWSSLSNLVSSKEKTQE 1200
>AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical
protein F52C6.2 protein.
Length = 110
Score = 27.1 bits (57), Expect = 1.8
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2
Query: 47 VKTLTGKTITLEVEASDTIENVKAKIQDKEGI 142
+KT TGKTIT+E S VK +++ K+G+
Sbjct: 5 IKTSTGKTITVEAPKS-----VKTEVRYKQGV 31
>AF003130-4|AAB54126.1| 1043|Caenorhabditis elegans Hypothetical
protein F55A12.8 protein.
Length = 1043
Score = 26.6 bits (56), Expect = 2.3
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +2
Query: 65 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 163
KT+ +V+ T+E ++ +I+ + +PP QRL
Sbjct: 664 KTVIKQVKDGHTVELLEERIEPRADLPPLLQRL 696
>Z19156-2|CAE17940.2| 275|Caenorhabditis elegans Hypothetical
protein T02C1.2 protein.
Length = 275
Score = 26.2 bits (55), Expect = 3.1
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 74 TLEVEASDTIENVKAKIQDKEGIPPDQQ 157
+L VE D IENV Q +PPD++
Sbjct: 229 SLVVEVIDEIENVPVNTQISPVMPPDEE 256
>Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical
protein F39B2.10 protein.
Length = 402
Score = 25.4 bits (53), Expect = 5.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 47 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 145
+ TL G+TI V + I + K+ EG+P
Sbjct: 279 ISTLDGRTIFYRVLPGEVIAHADVKVIHNEGMP 311
>AF125459-12|AAD12832.1| 533|Caenorhabditis elegans Hypothetical
protein Y25C1A.4 protein.
Length = 533
Score = 25.0 bits (52), Expect = 7.1
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 147 QTNNVSSLPGNN*KMAALFXTXTSRKNPHFTWF 245
Q N ++L G K ALF R +P+F+ F
Sbjct: 187 QANGAATLTGLQNKAEALFIQCEYRNSPYFSCF 219
>Z49068-10|CAA88858.1| 296|Caenorhabditis elegans Hypothetical
protein K01C8.7a protein.
Length = 296
Score = 24.6 bits (51), Expect = 9.4
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = -3
Query: 162 RRCWSGGIPSLSWILALTFSIVSEAS--TSNVMVFPVRVL 49
+RC S G+P S++ + I S S + + FP +VL
Sbjct: 192 KRCQSQGLPKDSFLSQTDYVIASSTSKVLATTITFPYQVL 231
>U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein
363, isoform b protein.
Length = 2692
Score = 24.6 bits (51), Expect = 9.4
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +2
Query: 35 MQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 172
M +TLTG I + E + KA +Q E P + QR++ A
Sbjct: 539 MASVYQTLTGSLIPPKSEPIGRPASPKAILQKAETDPKELQRIVLA 584
>U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein
363, isoform a protein.
Length = 2695
Score = 24.6 bits (51), Expect = 9.4
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +2
Query: 35 MQXFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 172
M +TLTG I + E + KA +Q E P + QR++ A
Sbjct: 539 MASVYQTLTGSLIPPKSEPIGRPASPKAILQKAETDPKELQRIVLA 584
>U80454-4|AAB37876.3| 896|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 66
protein.
Length = 896
Score = 24.6 bits (51), Expect = 9.4
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -3
Query: 174 PAKMRRCWSGGIPSLSWILALTF-SIVSEASTSNVMVF 64
P+K R WSGG L +L L + S+ + A+ S++ F
Sbjct: 383 PSKPRNFWSGGWVILPLMLELLYCSLFTIATISSLRFF 420
>AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform b
protein.
Length = 792
Score = 24.6 bits (51), Expect = 9.4
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -2
Query: 172 GKDETLLVWRNTFLVLDFSFDIFDSVG 92
G+D+ +L W FL+ +F D +G
Sbjct: 298 GRDQAMLQWEQRFLLQQNNFSADDPLG 324
>AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform a
protein.
Length = 794
Score = 24.6 bits (51), Expect = 9.4
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -2
Query: 172 GKDETLLVWRNTFLVLDFSFDIFDSVG 92
G+D+ +L W FL+ +F D +G
Sbjct: 298 GRDQAMLQWEQRFLLQQNNFSADDPLG 324
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,866,761
Number of Sequences: 27780
Number of extensions: 100501
Number of successful extensions: 349
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 348
length of database: 12,740,198
effective HSP length: 62
effective length of database: 11,017,838
effective search space used: 220356760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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