Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20g07
         (248 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              25   0.19 
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    20   5.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    20   5.3  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    19   7.1  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    19   7.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             19   7.1  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    19   9.3  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    19   9.3  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 24.6 bits (51), Expect = 0.19
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +2

Query: 92  SDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 181
           +DT+   K KI  K  I PD + L+   KQ
Sbjct: 732 TDTVLAYKPKILGKPTISPDSRHLVTLDKQ 761


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 19.8 bits (39), Expect = 5.3
 Identities = 13/53 (24%), Positives = 22/53 (41%)
 Frame = +2

Query: 86   EASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXNIQKESTLHLV 244
            ++ DT E  K  +Q KEG     Q+  F G  L     + +       T+ ++
Sbjct: 931  KSQDTTEVTKYILQYKEGDAGIWQQQEFTGPPLPYAALIDELKPATRYTIRVI 983


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 19.8 bits (39), Expect = 5.3
 Identities = 13/53 (24%), Positives = 22/53 (41%)
 Frame = +2

Query: 86   EASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRXLSDXNIQKESTLHLV 244
            ++ DT E  K  +Q KEG     Q+  F G  L     + +       T+ ++
Sbjct: 927  KSQDTTEVTKYILQYKEGDAGIWQQQEFTGPPLPYAALIDELKPATRYTIRVI 979


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 19.4 bits (38), Expect = 7.1
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -1

Query: 233 VWILSGCXSXKEXGHLLIVSRQR*DVV 153
           +WI S   S +   ++ IVS    D++
Sbjct: 79  IWIFSTSKSLRTPSNMFIVSLAIFDII 105


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 19.4 bits (38), Expect = 7.1
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -1

Query: 233 VWILSGCXSXKEXGHLLIVSRQR*DVV 153
           +WI S   S +   ++ IVS    D++
Sbjct: 79  IWIFSTSKSLRTPSNMFIVSLAIFDII 105


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 19.4 bits (38), Expect = 7.1
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 61  GEDHYIGGGSFRHYRKCQS 117
           GED +  GG+ R   K  S
Sbjct: 192 GEDEFANGGAARDESKAGS 210


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 19.0 bits (37), Expect = 9.3
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 178 FPGKDETLLVWRNT 137
           F G D T+L W +T
Sbjct: 287 FAGSDVTVLGWGHT 300


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 19.0 bits (37), Expect = 9.3
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = -1

Query: 239  GEVWILSGC 213
            G+VW+  GC
Sbjct: 1000 GKVWLFFGC 1008


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,678
Number of Sequences: 438
Number of extensions: 1120
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4401495
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)