Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20g02
         (607 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC103567-5|AAL35728.2|  337|Caenorhabditis elegans Hypothetical ...    30   1.1  
Z68315-2|CAA92668.1|  535|Caenorhabditis elegans Hypothetical pr...    28   4.5  

>AC103567-5|AAL35728.2|  337|Caenorhabditis elegans Hypothetical
           protein Y51F10.10 protein.
          Length = 337

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 20/60 (33%), Positives = 34/60 (56%)
 Frame = +1

Query: 277 RILQIISLRALESVLTQSPNINETRKLKSTTNISVNTRKNSSNHENLNFITN*NNIVRKP 456
           +IL +   +AL+ VL  + N + T+  +ST+++S+N  +    HE +N   N NN   KP
Sbjct: 154 QILALDDRKALQEVLMLT-NGSNTQLPQSTSSLSINHIQQQKQHEPIN---NNNNTEMKP 209


>Z68315-2|CAA92668.1|  535|Caenorhabditis elegans Hypothetical
           protein F28C6.2 protein.
          Length = 535

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 12/51 (23%), Positives = 24/51 (47%)
 Frame = +3

Query: 240 SDDDTVSSISPMSYSANNFIARARVSTHSKPKYKRDPEIEVDNEYIGEHPQ 392
           S++D +    P    +N +    +++ + K   K+  E+E +    GEH Q
Sbjct: 442 SNEDVIPGQKPFERMSNEYFVEWQMNLYKKKLAKQMEEVEENKSQRGEHQQ 492


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,023,133
Number of Sequences: 27780
Number of extensions: 235113
Number of successful extensions: 776
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)