Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20f21
         (550 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    25   2.2  
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    24   2.9  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    24   3.8  
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    23   8.8  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    23   8.8  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -2

Query: 348 GVSCFRYVYIGYISVIVSHGYSRFIFRPQNKP 253
           G  C+R  Y  Y S+ + H  S  +     KP
Sbjct: 351 GEKCYRCEYCPYASISMRHLESHLLLHTDQKP 382


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 448 FLTRDLIWMHWQNVLKGYYFYI 513
           FLTR  +W+ W+  L+ +  Y+
Sbjct: 384 FLTRGGLWLSWEEGLQHFLKYL 405


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +1

Query: 169 WCGNMTKIVNMLISLIFFSLFYACKCEYGFVLWSE 273
           WC  +   V  L++    S F++  CE   VL  E
Sbjct: 812 WCRRILDRVQRLLAQGITSAFHSTSCEVAVVLAGE 846


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 424 YSAGFLEGFLTRDLIWMHWQNVLKGY 501
           Y+ G ++GF     +  H  N+LKG+
Sbjct: 130 YNKGAVKGFYVEKTVPNHEVNMLKGW 155


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 424 YSAGFLEGFLTRDLIWMHWQNVLKGY 501
           Y+ G ++GF     +  H  N+LKG+
Sbjct: 130 YNKGAVKGFYVEKTVPNHEVNMLKGW 155


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 523,567
Number of Sequences: 2352
Number of extensions: 10735
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)