Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20f21
(550 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC030618-1|AAH30618.1| 589|Homo sapiens hypothetical protein LO... 67 4e-11
BC063561-1|AAH63561.1| 552|Homo sapiens hypothetical protein FL... 42 0.001
AK026315-1|BAB15442.1| 506|Homo sapiens protein ( Homo sapiens ... 38 0.018
X75755-1|CAA53383.1| 221|Homo sapiens PR264/SC35 protein. 38 0.023
X62447-1|CAA44307.1| 221|Homo sapiens PR 264 protein. 38 0.023
BT007250-1|AAP35914.1| 221|Homo sapiens splicing factor, argini... 38 0.023
BC070086-1|AAH70086.1| 221|Homo sapiens splicing factor, argini... 38 0.023
BC001303-1|AAH01303.1| 221|Homo sapiens SFRS2 protein protein. 38 0.023
BC000339-1|AAH00339.1| 221|Homo sapiens SFRS2 protein protein. 38 0.023
AK223252-1|BAD96972.1| 221|Homo sapiens splicing factor, argini... 38 0.023
AK092489-1|BAC03903.1| 201|Homo sapiens protein ( Homo sapiens ... 38 0.023
M90104-1|AAA60306.1| 221|Homo sapiens splicing factor protein. 38 0.031
BC066958-1|AAH66958.1| 179|Homo sapiens SFRS2 protein protein. 34 0.38
AK093626-1|BAC04206.1| 186|Homo sapiens protein ( Homo sapiens ... 34 0.38
BC057783-1|AAH57783.1| 275|Homo sapiens SFRS2B protein protein. 32 1.5
AF031166-1|AAK54351.1| 272|Homo sapiens SRp46 splicing factor p... 32 1.5
AF031165-1|AAK54350.1| 282|Homo sapiens SRp46 splicing factor p... 32 1.5
BC018370-1|AAH18370.1| 674|Homo sapiens fibronectin leucine ric... 30 6.1
AY358308-1|AAQ88675.1| 674|Homo sapiens FLRT1 protein. 30 6.1
AF169675-1|AAF28459.1| 674|Homo sapiens leucine-rich repeat tra... 30 6.1
>BC030618-1|AAH30618.1| 589|Homo sapiens hypothetical protein
LOC196463 protein.
Length = 589
Score = 66.9 bits (156), Expect = 4e-11
Identities = 32/62 (51%), Positives = 39/62 (62%)
Frame = +1
Query: 316 PDVYVAKATYTNEINNTGWAFLELHTSRDSTDEKQAYSAGFLEGFLTRDLIWMHWQNVLK 495
PD VA A TN I TGWAFLEL TS D QAY+AG +E ++ +LI+MHW N +
Sbjct: 81 PDA-VAWANLTNAIRETGWAFLELGTSGQYNDSLQAYAAGVVEAAVSEELIYMHWMNTVV 139
Query: 496 GY 501
Y
Sbjct: 140 NY 141
>BC063561-1|AAH63561.1| 552|Homo sapiens hypothetical protein
FLJ22662 protein.
Length = 552
Score = 41.9 bits (94), Expect = 0.001
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = +1
Query: 250 YGFVLWSENKPTVTVTDYYADIPDVYVAKATYTNEINNTGWAFLELHT---SRDSTDEKQ 420
Y W + TV V + D Y Y N + TGW LE+ S+ ++E
Sbjct: 41 YATAYWMPAEKTVQVKNVMDKNGDAY---GFYNNSVKTTGWGILEIRAGYGSQTLSNEII 97
Query: 421 AYSAGFLEGFLTRDLIWMHWQNV 489
+ AGFLEG+LT + H+ N+
Sbjct: 98 MFVAGFLEGYLTAPHMNDHYTNL 120
>AK026315-1|BAB15442.1| 506|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22662 fis, clone HSI08080. ).
Length = 506
Score = 38.3 bits (85), Expect = 0.018
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +1
Query: 343 YTNEINNTGWAFLELHT---SRDSTDEKQAYSAGFLEGFLTRDLIWMHWQNV 489
Y N + TGW LE+ S+ ++E + AGFLEG+LT + H+ N+
Sbjct: 23 YNNSVKTTGWGILEIRAGYGSQTLSNEIIMFVAGFLEGYLTAPHMNDHYTNL 74
>X75755-1|CAA53383.1| 221|Homo sapiens PR264/SC35 protein.
Length = 221
Score = 37.9 bits (84), Expect = 0.023
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +1
Query: 292 VTDYYADIPDVYVAKATYTNEINNTGWAFLELHTSRDSTDEKQAYSAGFLEG 447
V + Y + DVY+ + YT E + G+AF+ H RD+ D A L+G
Sbjct: 33 VFEKYGRVGDVYIPRDRYTKE--SRGFAFVRFHDKRDAEDAMDAMDGAVLDG 82
>X62447-1|CAA44307.1| 221|Homo sapiens PR 264 protein.
Length = 221
Score = 37.9 bits (84), Expect = 0.023
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +1
Query: 292 VTDYYADIPDVYVAKATYTNEINNTGWAFLELHTSRDSTDEKQAYSAGFLEG 447
V + Y + DVY+ + YT E + G+AF+ H RD+ D A L+G
Sbjct: 33 VFEKYGRVGDVYIPRDRYTKE--SRGFAFVRFHDKRDAEDAMDAMDGAVLDG 82
>BT007250-1|AAP35914.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 protein.
Length = 221
Score = 37.9 bits (84), Expect = 0.023
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +1
Query: 292 VTDYYADIPDVYVAKATYTNEINNTGWAFLELHTSRDSTDEKQAYSAGFLEG 447
V + Y + DVY+ + YT E + G+AF+ H RD+ D A L+G
Sbjct: 33 VFEKYGRVGDVYIPRDRYTKE--SRGFAFVRFHDKRDAEDAMDAMDGAVLDG 82
>BC070086-1|AAH70086.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 protein.
Length = 221
Score = 37.9 bits (84), Expect = 0.023
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +1
Query: 292 VTDYYADIPDVYVAKATYTNEINNTGWAFLELHTSRDSTDEKQAYSAGFLEG 447
V + Y + DVY+ + YT E + G+AF+ H RD+ D A L+G
Sbjct: 33 VFEKYGRVGDVYIPRDRYTKE--SRGFAFVRFHDKRDAEDAMDAMDGAVLDG 82
>BC001303-1|AAH01303.1| 221|Homo sapiens SFRS2 protein protein.
Length = 221
Score = 37.9 bits (84), Expect = 0.023
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +1
Query: 292 VTDYYADIPDVYVAKATYTNEINNTGWAFLELHTSRDSTDEKQAYSAGFLEG 447
V + Y + DVY+ + YT E + G+AF+ H RD+ D A L+G
Sbjct: 33 VFEKYGRVGDVYIPRDRYTKE--SRGFAFVRFHDKRDAEDAMDAMDGAVLDG 82
>BC000339-1|AAH00339.1| 221|Homo sapiens SFRS2 protein protein.
Length = 221
Score = 37.9 bits (84), Expect = 0.023
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +1
Query: 292 VTDYYADIPDVYVAKATYTNEINNTGWAFLELHTSRDSTDEKQAYSAGFLEG 447
V + Y + DVY+ + YT E + G+AF+ H RD+ D A L+G
Sbjct: 33 VFEKYGRVGDVYIPRDRYTKE--SRGFAFVRFHDKRDAEDAMDAMDGAVLDG 82
>AK223252-1|BAD96972.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 variant protein.
Length = 221
Score = 37.9 bits (84), Expect = 0.023
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +1
Query: 292 VTDYYADIPDVYVAKATYTNEINNTGWAFLELHTSRDSTDEKQAYSAGFLEG 447
V + Y + DVY+ + YT E + G+AF+ H RD+ D A L+G
Sbjct: 33 VFEKYGRVGDVYIPRDRYTKE--SRGFAFVRFHDKRDAEDAMDAMDGAVLDG 82
>AK092489-1|BAC03903.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ35170 fis, clone PLACE6012942, highly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 2. ).
Length = 201
Score = 37.9 bits (84), Expect = 0.023
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +1
Query: 292 VTDYYADIPDVYVAKATYTNEINNTGWAFLELHTSRDSTDEKQAYSAGFLEG 447
V + Y + DVY+ + YT E + G+AF+ H RD+ D A L+G
Sbjct: 33 VFEKYGRVGDVYIPRDRYTKE--SRGFAFVRFHDKRDAEDAMDAMDGAVLDG 82
>M90104-1|AAA60306.1| 221|Homo sapiens splicing factor protein.
Length = 221
Score = 37.5 bits (83), Expect = 0.031
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +1
Query: 292 VTDYYADIPDVYVAKATYTNEINNTGWAFLELHTSRDSTDEKQAYSAGFLEG 447
V + Y + DVY+ + YT E + G+AF+ H RD+ D A L+G
Sbjct: 33 VFEKYRRVGDVYIPRDRYTKE--SRGFAFVRFHDKRDAEDAMDAMDGAVLDG 82
>BC066958-1|AAH66958.1| 179|Homo sapiens SFRS2 protein protein.
Length = 179
Score = 33.9 bits (74), Expect = 0.38
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 292 VTDYYADIPDVYVAKATYTNEINNTGWAFLELHTSRDSTDEKQA 423
V + Y + DVY+ + YT E + G+AF+ H RD+ D A
Sbjct: 33 VFEKYGRVGDVYIPRDRYTKE--SRGFAFVRFHDKRDAEDAMDA 74
>AK093626-1|BAC04206.1| 186|Homo sapiens protein ( Homo sapiens
cDNA FLJ36307 fis, clone THYMU2004906, moderately
similar to SPLICING FACTOR, ARGININE/SERINE-RICH 2. ).
Length = 186
Score = 33.9 bits (74), Expect = 0.38
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 292 VTDYYADIPDVYVAKATYTNEINNTGWAFLELHTSRDSTDEKQA 423
V + Y + DVY+ + YT E + G+AF+ H RD+ D A
Sbjct: 33 VFEKYGRVGDVYIPRDRYTKE--SRGFAFVRFHDKRDAEDAMDA 74
>BC057783-1|AAH57783.1| 275|Homo sapiens SFRS2B protein protein.
Length = 275
Score = 31.9 bits (69), Expect = 1.5
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +1
Query: 292 VTDYYADIPDVYVAKATYTNEINNTGWAFLELHTSRDSTDEKQAYSAGFLEG 447
V + Y + DVY+ + +T G+AF+ H RD+ D + A L+G
Sbjct: 33 VFEKYGRVGDVYIPREPHTKAPR--GFAFVRFHDRRDAQDAEAAMDGAELDG 82
>AF031166-1|AAK54351.1| 272|Homo sapiens SRp46 splicing factor
protein.
Length = 272
Score = 31.9 bits (69), Expect = 1.5
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +1
Query: 292 VTDYYADIPDVYVAKATYTNEINNTGWAFLELHTSRDSTDEKQAYSAGFLEG 447
V + Y + DVY+ + +T G+AF+ H RD+ D + A L+G
Sbjct: 23 VFEKYGRVGDVYIPREPHTKAPR--GFAFVRFHDRRDAQDAEAAMDGAELDG 72
>AF031165-1|AAK54350.1| 282|Homo sapiens SRp46 splicing factor
protein.
Length = 282
Score = 31.9 bits (69), Expect = 1.5
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +1
Query: 292 VTDYYADIPDVYVAKATYTNEINNTGWAFLELHTSRDSTDEKQAYSAGFLEG 447
V + Y + DVY+ + +T G+AF+ H RD+ D + A L+G
Sbjct: 33 VFEKYGRVGDVYIPREPHTKAPR--GFAFVRFHDRRDAQDAEAAMDGAELDG 82
>BC018370-1|AAH18370.1| 674|Homo sapiens fibronectin leucine rich
transmembrane protein 1 protein.
Length = 674
Score = 29.9 bits (64), Expect = 6.1
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +1
Query: 238 CKCEYGFVLWSENKPTVTVTDYYADIPDVYVAKATYTNEINNTG 369
C+C+ GF+ ++ +T ADIPD N+INN G
Sbjct: 58 CRCDNGFIYCNDRG----LTSIPADIPDDATTLYLQNNQINNAG 97
>AY358308-1|AAQ88675.1| 674|Homo sapiens FLRT1 protein.
Length = 674
Score = 29.9 bits (64), Expect = 6.1
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +1
Query: 238 CKCEYGFVLWSENKPTVTVTDYYADIPDVYVAKATYTNEINNTG 369
C+C+ GF+ ++ +T ADIPD N+INN G
Sbjct: 58 CRCDNGFIYCNDRG----LTSIPADIPDDATTLYLQNNQINNAG 97
>AF169675-1|AAF28459.1| 674|Homo sapiens leucine-rich repeat
transmembrane protein FLRT1 protein.
Length = 674
Score = 29.9 bits (64), Expect = 6.1
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +1
Query: 238 CKCEYGFVLWSENKPTVTVTDYYADIPDVYVAKATYTNEINNTG 369
C+C+ GF+ ++ +T ADIPD N+INN G
Sbjct: 58 CRCDNGFIYCNDRG----LTSIPADIPDDATTLYLQNNQINNAG 97
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,161,275
Number of Sequences: 237096
Number of extensions: 1367682
Number of successful extensions: 2150
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2136
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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