Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20f21
         (550 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     22   3.6  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    21   6.2  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   6.2  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   6.2  

>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 448 FLTRDLIWMHWQNVLK 495
           FLTR  +W+ W+  +K
Sbjct: 381 FLTRGDLWISWEEGMK 396


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2

Query: 357 YFVGVSCFRYVYIGYISVIVS 295
           Y +G+ C   V + + S IVS
Sbjct: 381 YLLGIQCLTVVCLAFWSFIVS 401


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +2

Query: 62  FLYYNYTLVYRPHKVR*RLIITY 130
           FL YNYT+    H    RLI  Y
Sbjct: 371 FLDYNYTIPKEKHVEVARLIRNY 393


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +2

Query: 62  FLYYNYTLVYRPHKVR*RLIITY 130
           FL YNYT+    H    RLI  Y
Sbjct: 371 FLDYNYTIPKEKHVEVARLIRNY 393


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,159
Number of Sequences: 438
Number of extensions: 2638
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15704448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)