Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20f14
         (693 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35637-2|CAA84688.1|  381|Caenorhabditis elegans Hypothetical pr...   229   2e-60
U51997-5|AAG24065.1|  668|Caenorhabditis elegans Hypothetical pr...    72   5e-13
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ...    32   0.45 
AF003143-4|AAO61427.1|  247|Caenorhabditis elegans Hypothetical ...    30   1.4  
AF003143-3|AAL65781.1|  385|Caenorhabditis elegans Hypothetical ...    30   1.4  
AF003143-2|AAK68267.2|  554|Caenorhabditis elegans Hypothetical ...    30   1.4  
Z82069-3|CAB04908.1|  129|Caenorhabditis elegans Hypothetical pr...    29   3.2  
AF003384-5|AAB54239.2|  324|Caenorhabditis elegans Uncoupling pr...    29   3.2  
AF099000-2|AAK71875.1|  337|Caenorhabditis elegans Serpentine re...    28   5.5  
Z72505-3|CAA96610.1|  340|Caenorhabditis elegans Hypothetical pr...    27   9.6  

>Z35637-2|CAA84688.1|  381|Caenorhabditis elegans Hypothetical
           protein C03C10.3 protein.
          Length = 381

 Score =  229 bits (559), Expect = 2e-60
 Identities = 110/205 (53%), Positives = 146/205 (71%), Gaps = 3/205 (1%)
 Frame = +2

Query: 86  TMAPTVDKENLHSGI--NGENRVQTKSPMKNSVLATKNDNLT-EEMDLDKNFEEFDPQKE 256
           T    V+KEN  + +  +  N+++ +  ++   +  +    + EE + +    E D   E
Sbjct: 4   TEIQNVEKENAGASVPKHSSNKLKLEKELEKLEIVDQTKAASAEETNNESEVNELDAD-E 62

Query: 257 PLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHV 436
           P+L++   RFVIFP+++ DIW  YKKA ASFWTVEEVDL KD++DWE +   E++FI  +
Sbjct: 63  PMLQDLDNRFVIFPLKHHDIWNFYKKAVASFWTVEEVDLGKDMNDWEKMNGDEQYFISRI 122

Query: 437 LAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKER 616
           LAFFAASDGIVNENL ERFS EVQV+EAR FYGFQIA+EN+HSEMYS LI+TYIRD  ER
Sbjct: 123 LAFFAASDGIVNENLCERFSNEVQVSEARFFYGFQIAIENIHSEMYSKLIETYIRDETER 182

Query: 617 DFLFNAVETLPCVKKKADWALQWIA 691
           + LFNAV+    +KKKADWAL+WI+
Sbjct: 183 NTLFNAVDEFEFIKKKADWALRWIS 207


>U51997-5|AAG24065.1|  668|Caenorhabditis elegans Hypothetical
           protein F19G12.2 protein.
          Length = 668

 Score = 71.7 bits (168), Expect = 5e-13
 Identities = 29/50 (58%), Positives = 39/50 (78%)
 Frame = +2

Query: 542 IAMENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCVKKKADWALQWIA 691
           IA+EN+HSEMY+ L++ YIRD  ER+ LFNA+ T   +K KADW L+WI+
Sbjct: 445 IAVENIHSEMYAKLLEAYIRDDAERNILFNAITTFKFIKAKADWCLRWIS 494


>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
            protein F55F10.1 protein.
          Length = 4368

 Score = 31.9 bits (69), Expect = 0.45
 Identities = 22/86 (25%), Positives = 39/86 (45%)
 Frame = +2

Query: 155  KSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYKK 334
            K+  K+ V  TK +   +EMDL++ F   + Q   + ++N ++    P  Y +I    KK
Sbjct: 2693 KAEQKDFVYRTKTEEEKDEMDLEEFFANHE-QDHQVQKKNRKKCSKNPSNYANILMKIKK 2751

Query: 335  AEASFWTVEEVDLSKDLSDWETLKDS 412
                   + + D+S  L   E  + S
Sbjct: 2752 PTFLIQVLPDCDVSMLLESVERKRSS 2777


>AF003143-4|AAO61427.1|  247|Caenorhabditis elegans Hypothetical
           protein C53H9.2c protein.
          Length = 247

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
 Frame = +2

Query: 143 RVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQ 322
           RV  KS +   ++  +N  L    DLD   +E DP K+ LL  N +  ++ P Q    W+
Sbjct: 7   RVVEKSDIIVQIVDARNPLLFRSKDLDDYVKEVDPAKQILLLVN-KADLLKPEQQAS-WR 64

Query: 323 MYKKAE---ASFWT-VEEV 367
            Y + E     FW+ ++EV
Sbjct: 65  EYFEKENIKVIFWSAIDEV 83


>AF003143-3|AAL65781.1|  385|Caenorhabditis elegans Hypothetical
           protein C53H9.2b protein.
          Length = 385

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
 Frame = +2

Query: 143 RVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQ 322
           RV  KS +   ++  +N  L    DLD   +E DP K+ LL  N +  ++ P Q    W+
Sbjct: 7   RVVEKSDIIVQIVDARNPLLFRSKDLDDYVKEVDPAKQILLLVN-KADLLKPEQQAS-WR 64

Query: 323 MYKKAE---ASFWT-VEEV 367
            Y + E     FW+ ++EV
Sbjct: 65  EYFEKENIKVIFWSAIDEV 83


>AF003143-2|AAK68267.2|  554|Caenorhabditis elegans Hypothetical
           protein C53H9.2a protein.
          Length = 554

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
 Frame = +2

Query: 143 RVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQ 322
           RV  KS +   ++  +N  L    DLD   +E DP K+ LL  N +  ++ P Q    W+
Sbjct: 176 RVVEKSDIIVQIVDARNPLLFRSKDLDDYVKEVDPAKQILLLVN-KADLLKPEQQAS-WR 233

Query: 323 MYKKAE---ASFWT-VEEV 367
            Y + E     FW+ ++EV
Sbjct: 234 EYFEKENIKVIFWSAIDEV 252


>Z82069-3|CAB04908.1|  129|Caenorhabditis elegans Hypothetical
           protein W04A8.4 protein.
          Length = 129

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 22/82 (26%), Positives = 38/82 (46%)
 Frame = +2

Query: 332 KAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQEVQV 511
           KAEA++WT  ++   + +SDW     +  H     L  +A  D IV   ++++  + +  
Sbjct: 56  KAEATYWTGLDLHKGETMSDW-----TNTHLRGDQLR-YAIMDTIVMHLIIKQRLRNIHK 109

Query: 512 TEARCFYGFQIAMENVHSEMYS 577
            + R    FQ   EN H   Y+
Sbjct: 110 NDPRL---FQYVFENGHPLPYN 128


>AF003384-5|AAB54239.2|  324|Caenorhabditis elegans Uncoupling
           protein (mitochondrialsubstrate carrier) protein 4
           protein.
          Length = 324

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +2

Query: 551 ENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCVKKKADWALQ-WIA 691
           +N H ++Y  ++D YI+  K   F       LP   + A W+L  W++
Sbjct: 264 KNTHVDLYKGVVDCYIKIIKNEGFFSLYKGFLPSYIRMAPWSLTFWVS 311


>AF099000-2|AAK71875.1|  337|Caenorhabditis elegans Serpentine
           receptor, class h protein128 protein.
          Length = 337

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 575 SLLIDTYIRDPKERDFLFNAVETLPCVKKK 664
           + L+  YI  P +RD     +ET+PC+  K
Sbjct: 151 AFLVPIYILHPGQRDIQKYTIETIPCLPPK 180


>Z72505-3|CAA96610.1|  340|Caenorhabditis elegans Hypothetical
           protein C50C10.4 protein.
          Length = 340

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = -1

Query: 225 LSRSISSVKLSFFVANTLFFMGDF 154
           + R+I +  + +F+ NTLFF+GD+
Sbjct: 65  MDRNIFAFIMFYFLFNTLFFVGDY 88


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,928,129
Number of Sequences: 27780
Number of extensions: 337795
Number of successful extensions: 1004
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1004
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)