Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20f14
         (693 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    26   0.39 
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    25   0.90 
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    25   0.90 
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    23   2.8  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   3.6  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   4.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   4.8  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   8.4  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    21   8.4  
AB050744-1|BAB17753.1|  238|Apis mellifera period protein protein.     21   8.4  

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 25.8 bits (54), Expect = 0.39
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +2

Query: 293 FPIQYPDIWQMYKKAEASFWTVEEVDLSKD 382
           FP Q P  W++ K AE + + V E DLS D
Sbjct: 217 FPYQPPFAWKILKAAEEAGFGVSE-DLSGD 245


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 24.6 bits (51), Expect = 0.90
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +2

Query: 542 IAMENVHSEMYSLLIDTYIRDPKERDFL 625
           I+ +    + Y  +ID ++R PKE+ FL
Sbjct: 43  ISKQISEEQRYKGMIDCFVRIPKEQGFL 70


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 24.6 bits (51), Expect = 0.90
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +2

Query: 542 IAMENVHSEMYSLLIDTYIRDPKERDFL 625
           I+ +    + Y  +ID ++R PKE+ FL
Sbjct: 43  ISKQISEEQRYKGMIDCFVRIPKEQGFL 70


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +1

Query: 382 FIRLGNLKR**ETFHQACPCFLCG 453
           ++ LG LK    T    C C LCG
Sbjct: 26  YVSLGALKMHIRTHTLPCKCHLCG 49


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 344 SFWTVEEVDLSKDL 385
           +FWT  +VDLS+ L
Sbjct: 450 TFWTKSDVDLSRGL 463


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 284 SAAGSPAAEVPFVGRTLRN 228
           +A G P  +VP V R LRN
Sbjct: 66  TADGHPVNDVPGVRRVLRN 84


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 284 SAAGSPAAEVPFVGRTLRN 228
           +A G P  +VP V R LRN
Sbjct: 66  TADGHPVNDVPGVRRVLRN 84


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 244 PTKGTSAAGEPA 279
           P KG +AAG+P+
Sbjct: 530 PAKGAAAAGQPS 541


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -2

Query: 392 SLINPWTNRL 363
           S INPWT +L
Sbjct: 393 SFINPWTKKL 402


>AB050744-1|BAB17753.1|  238|Apis mellifera period protein protein.
          Length = 238

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -2

Query: 392 SLINPWTNRL 363
           S INPWT +L
Sbjct: 99  SFINPWTKKL 108


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,363
Number of Sequences: 438
Number of extensions: 3918
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)