Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20f02
         (663 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132862-11|CAB60541.1|  396|Caenorhabditis elegans Hypothetical...    29   2.2  
AL132862-12|CAB60542.1|  380|Caenorhabditis elegans Hypothetical...    28   6.8  
Z73103-14|CAL22701.1|  387|Caenorhabditis elegans Hypothetical p...    27   9.0  
Z73103-13|CAA97430.1|  340|Caenorhabditis elegans Hypothetical p...    27   9.0  
Z68341-7|CAL22703.1|  387|Caenorhabditis elegans Hypothetical pr...    27   9.0  
Z68341-6|CAA92769.1|  340|Caenorhabditis elegans Hypothetical pr...    27   9.0  
Z46934-12|CAA87044.3|  539|Caenorhabditis elegans Hypothetical p...    27   9.0  
X76113-1|CAA53719.1|  340|Caenorhabditis elegans phosphate carri...    27   9.0  

>AL132862-11|CAB60541.1|  396|Caenorhabditis elegans Hypothetical
           protein Y73F8A.16 protein.
          Length = 396

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +3

Query: 261 YNITMETKLFVKIFLSNQYVMNLMKIKPFKTENYYKSMR*GNERENTNISNE 416
           +++ ME   F  + + NQ  +   K K  K   Y   +  GN+R+NT+ S E
Sbjct: 154 HSMRMEVAQFFPVTVYNQESIGNWKSKFHKNSTYGNRLDGGNKRKNTDSSEE 205


>AL132862-12|CAB60542.1|  380|Caenorhabditis elegans Hypothetical
           protein Y73F8A.17 protein.
          Length = 380

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = +3

Query: 261 YNITMETKLFVKIFLSNQYVMNLMKIKPFKTENYYKSMR*GNERENTNISNE 416
           +++ ME   F  + + NQ  +   K K  K   +   +  GN+R+NTN   E
Sbjct: 154 HSMRMEVAQFFPVTVYNQESIGNWKSKFHKNATFENRLDGGNKRKNTNSREE 205


>Z73103-14|CAL22701.1|  387|Caenorhabditis elegans Hypothetical
           protein F01G4.6b protein.
          Length = 387

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -1

Query: 201 WAHNLLDGYILKGLGSVGDEGLFKNTTASL 112
           WA  LL GY  +GLG  G   +FKN  A +
Sbjct: 148 WAPTLL-GYSAQGLGKFGFYEIFKNVYADM 176


>Z73103-13|CAA97430.1|  340|Caenorhabditis elegans Hypothetical
           protein F01G4.6a protein.
          Length = 340

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -1

Query: 201 WAHNLLDGYILKGLGSVGDEGLFKNTTASL 112
           WA  LL GY  +GLG  G   +FKN  A +
Sbjct: 101 WAPTLL-GYSAQGLGKFGFYEIFKNVYADM 129


>Z68341-7|CAL22703.1|  387|Caenorhabditis elegans Hypothetical
           protein F01G4.6b protein.
          Length = 387

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -1

Query: 201 WAHNLLDGYILKGLGSVGDEGLFKNTTASL 112
           WA  LL GY  +GLG  G   +FKN  A +
Sbjct: 148 WAPTLL-GYSAQGLGKFGFYEIFKNVYADM 176


>Z68341-6|CAA92769.1|  340|Caenorhabditis elegans Hypothetical
           protein F01G4.6a protein.
          Length = 340

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -1

Query: 201 WAHNLLDGYILKGLGSVGDEGLFKNTTASL 112
           WA  LL GY  +GLG  G   +FKN  A +
Sbjct: 101 WAPTLL-GYSAQGLGKFGFYEIFKNVYADM 129


>Z46934-12|CAA87044.3|  539|Caenorhabditis elegans Hypothetical
           protein ZK1320.6 protein.
          Length = 539

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 9/27 (33%), Positives = 21/27 (77%)
 Frame = +2

Query: 539 GEIGRNGELVEFEKVILEKIILMECNE 619
           G + ++GE+V+F++   E+++ +EC+E
Sbjct: 84  GLLEKSGEVVKFDRYSKERLLNLECDE 110


>X76113-1|CAA53719.1|  340|Caenorhabditis elegans phosphate carrier
           protein protein.
          Length = 340

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -1

Query: 201 WAHNLLDGYILKGLGSVGDEGLFKNTTASL 112
           WA  LL GY  +GLG  G   +FKN  A +
Sbjct: 101 WAPTLL-GYSAQGLGKFGFYEIFKNVYADM 129


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,330,323
Number of Sequences: 27780
Number of extensions: 235197
Number of successful extensions: 585
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 585
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)