Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20e21
         (130 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex det...    20   3.1  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    20   3.1  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    20   3.1  
DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex det...    18   9.6  
DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex det...    18   9.6  
DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex det...    18   9.6  
DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex det...    18   9.6  
DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex det...    18   9.6  
DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex det...    18   9.6  
DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex det...    18   9.6  
DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex det...    18   9.6  

>DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +1

Query: 4   LSSEANFNKNKNY 42
           +S+ +N+N N NY
Sbjct: 90  ISNISNYNNNNNY 102


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +1

Query: 4   LSSEANFNKNKNY 42
           +S+ +N+N N NY
Sbjct: 328 ISNISNYNNNNNY 340


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -1

Query: 103 STLFANKLIHHTFINRSKFANNF 35
           +TL   ++IH+  +N+    NN+
Sbjct: 568 ATLSFCEMIHNAQVNKRSIHNNY 590


>DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +1

Query: 7   SSEANFNKNKNY 42
           S+  N+N N NY
Sbjct: 92  SNYNNYNNNNNY 103


>DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +1

Query: 7   SSEANFNKNKNY 42
           S+  N+N N NY
Sbjct: 92  SNYNNYNNNNNY 103


>DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +1

Query: 7   SSEANFNKNKNY 42
           S+  N+N N NY
Sbjct: 92  SNYNNYNNNNNY 103


>DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +1

Query: 7   SSEANFNKNKNY 42
           S+  N+N N NY
Sbjct: 92  SNYNNYNNNNNY 103


>DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +1

Query: 7   SSEANFNKNKNY 42
           S+  N+N N NY
Sbjct: 92  SNYNNYNNNNNY 103


>DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +1

Query: 7   SSEANFNKNKNY 42
           S+  N+N N NY
Sbjct: 92  SNYNNYNNNNNY 103


>DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +1

Query: 7   SSEANFNKNKNY 42
           S+  N+N N NY
Sbjct: 92  SNYNNYNNNNNY 103


>DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +1

Query: 7   SSEANFNKNKNY 42
           S+  N+N N NY
Sbjct: 92  SNYNNYNNNNNY 103


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,881
Number of Sequences: 438
Number of extensions: 272
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 23
effective length of database: 136,269
effective search space used:  2589111
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)