Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20e13
         (520 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0667 + 26071774-26072070,26072352-26073153,26073209-260734...    31   0.55 
01_01_0590 + 4396958-4397155,4397246-4397335,4397445-4397583,439...    29   1.7  
06_01_0065 + 549972-550770,551577-552190,552392-552544,552769-55...    27   6.8  

>11_06_0667 +
           26071774-26072070,26072352-26073153,26073209-26073411,
           26075078-26075521,26075703-26075758,26076323-26076402,
           26077098-26077174,26077279-26078301
          Length = 993

 Score = 31.1 bits (67), Expect = 0.55
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -1

Query: 496 CNIRSNRVFSDNFWXPILXSFDIVI 422
           C+I+S+ +  D+ W P L SFDI +
Sbjct: 825 CDIKSSNILLDSSWSPRLSSFDIAV 849


>01_01_0590 +
           4396958-4397155,4397246-4397335,4397445-4397583,
           4398125-4398243,4398492-4398559,4399409-4399457,
           4399713-4400732
          Length = 560

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = +3

Query: 60  GKCT--KDDSIXCLVFLLCRSDPNTALDYDRXHPXRATQSTNLAVPL 194
           GK T  K  S+  LV +LC S P TA+ +DR     AT   +  V +
Sbjct: 287 GKVTMWKPTSVKPLVTMLCHSGPVTAIAFDRGGHLMATAGVDRKVKI 333


>06_01_0065 +
           549972-550770,551577-552190,552392-552544,552769-552885,
           552972-553076,553269-553334,553430-553494,553577-553778,
           554026-554169,554212-554340
          Length = 797

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +2

Query: 347 KTGTDTSGDMRANTLRDLKRCKPCXDHDVEGXQDW 451
           K   D +G++    + D +R + C +HD     DW
Sbjct: 416 KALVDKAGNLAMKRIIDRRRAQFCQEHDENSKHDW 450


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,019,679
Number of Sequences: 37544
Number of extensions: 213533
Number of successful extensions: 473
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 473
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1130733700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)