BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20e13
(520 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-2272|AAN11836.1| 626|Drosophila melanogaster CG32121-P... 29 3.8
AY119485-1|AAM50139.1| 846|Drosophila melanogaster GH07623p pro... 28 6.6
AE014297-4203|AAF56763.2| 1109|Drosophila melanogaster CG5514-PA... 28 6.6
AE014297-4202|AAN14134.1| 1150|Drosophila melanogaster CG5514-PB... 28 6.6
AY075422-1|AAL68238.1| 1674|Drosophila melanogaster LD43328p pro... 28 8.7
AE013599-760|AAF59009.3| 1629|Drosophila melanogaster CG8213-PA ... 28 8.7
>AE014296-2272|AAN11836.1| 626|Drosophila melanogaster CG32121-PA
protein.
Length = 626
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +2
Query: 233 SPRDSXSASESNIPTKEHALXIEQFPNWNKSQIPVAIHKTGTDTSGDMRANTLRDL 400
SP + + + S+ PT H+L + Q P+ P+ +K G+ S M L +L
Sbjct: 154 SPTPTPTLTPSHTPTPSHSLPLPQLPS-AALNTPLLANKLGSVNSSGMGTTPLENL 208
>AY119485-1|AAM50139.1| 846|Drosophila melanogaster GH07623p
protein.
Length = 846
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/58 (31%), Positives = 33/58 (56%)
Frame = +2
Query: 113 IRSKHRLGLRQXTSPXSNAVDQSSSSPEIPAERLXAXELKSPRDSXSASESNIPTKEH 286
++ +HR+ + T+P SSS+ PA+RL E P+ S + S+++I +KE+
Sbjct: 784 MQEQHRV--ERETTPPQPRSPSSSSTAGSPAKRLRQDE---PKSSPTPSDASINSKEN 836
>AE014297-4203|AAF56763.2| 1109|Drosophila melanogaster CG5514-PA,
isoform A protein.
Length = 1109
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/58 (31%), Positives = 33/58 (56%)
Frame = +2
Query: 113 IRSKHRLGLRQXTSPXSNAVDQSSSSPEIPAERLXAXELKSPRDSXSASESNIPTKEH 286
++ +HR+ + T+P SSS+ PA+RL E P+ S + S+++I +KE+
Sbjct: 1047 MQEQHRV--ERETTPPQPRSPSSSSTAGSPAKRLRQDE---PKSSPTPSDASINSKEN 1099
>AE014297-4202|AAN14134.1| 1150|Drosophila melanogaster CG5514-PB,
isoform B protein.
Length = 1150
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/58 (31%), Positives = 33/58 (56%)
Frame = +2
Query: 113 IRSKHRLGLRQXTSPXSNAVDQSSSSPEIPAERLXAXELKSPRDSXSASESNIPTKEH 286
++ +HR+ + T+P SSS+ PA+RL E P+ S + S+++I +KE+
Sbjct: 1047 MQEQHRV--ERETTPPQPRSPSSSSTAGSPAKRLRQDE---PKSSPTPSDASINSKEN 1099
>AY075422-1|AAL68238.1| 1674|Drosophila melanogaster LD43328p
protein.
Length = 1674
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 98 VFTMPIRSKHRLGLRQXTSPXSNAVDQSSSSP 193
VFT + +K GL+ TS SN+ ++ SS+P
Sbjct: 340 VFTTEVPTKITSGLQDQTSSESNSFEEVSSTP 371
>AE013599-760|AAF59009.3| 1629|Drosophila melanogaster CG8213-PA
protein.
Length = 1629
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 98 VFTMPIRSKHRLGLRQXTSPXSNAVDQSSSSP 193
VFT + +K GL+ TS SN+ ++ SS+P
Sbjct: 340 VFTTEVPTKITSGLQDQTSSESNSFEEVSSTP 371
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,353,255
Number of Sequences: 53049
Number of extensions: 362463
Number of successful extensions: 782
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 782
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1908489216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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