Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20e13
         (520 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81562-9|CAN99693.1| 1376|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z81474-10|CAN99685.1| 1376|Caenorhabditis elegans Hypothetical p...    29   2.0  
Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical pr...    29   2.0  
AF026209-4|AAW88411.1|  317|Caenorhabditis elegans Serpentine re...    29   2.6  
Z22177-12|CAA80152.1|  974|Caenorhabditis elegans Hypothetical p...    28   4.6  
Z19155-5|CAA79562.1|  974|Caenorhabditis elegans Hypothetical pr...    28   4.6  
U80836-8|AAL32206.2|  212|Caenorhabditis elegans Hypothetical pr...    27   6.1  
Z49969-3|CAA90267.1|  792|Caenorhabditis elegans Hypothetical pr...    27   8.0  
U58740-2|AAD32276.1|  191|Caenorhabditis elegans Hypothetical pr...    27   8.0  

>Z81562-9|CAN99693.1| 1376|Caenorhabditis elegans Hypothetical protein
            C18D4.2b protein.
          Length = 1376

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 18/62 (29%), Positives = 27/62 (43%)
 Frame = +2

Query: 119  SKHRLGLRQXTSPXSNAVDQSSSSPEIPAERLXAXELKSPRDSXSASESNIPTKEHALXI 298
            +K +LG+ Q  S        + +SPE            + R+    SESNI  K + L I
Sbjct: 1013 AKLKLGITQSLSDSKEDPSTNEASPEDDLPSTSDNRTPTSRERSERSESNIDNKMNKLTI 1072

Query: 299  EQ 304
            +Q
Sbjct: 1073 KQ 1074


>Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical protein
            C18D4.2a protein.
          Length = 1817

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 18/62 (29%), Positives = 27/62 (43%)
 Frame = +2

Query: 119  SKHRLGLRQXTSPXSNAVDQSSSSPEIPAERLXAXELKSPRDSXSASESNIPTKEHALXI 298
            +K +LG+ Q  S        + +SPE            + R+    SESNI  K + L I
Sbjct: 1013 AKLKLGITQSLSDSKEDPSTNEASPEDDLPSTSDNRTPTSRERSERSESNIDNKMNKLTI 1072

Query: 299  EQ 304
            +Q
Sbjct: 1073 KQ 1074


>Z81474-10|CAN99685.1| 1376|Caenorhabditis elegans Hypothetical
            protein C18D4.2b protein.
          Length = 1376

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 18/62 (29%), Positives = 27/62 (43%)
 Frame = +2

Query: 119  SKHRLGLRQXTSPXSNAVDQSSSSPEIPAERLXAXELKSPRDSXSASESNIPTKEHALXI 298
            +K +LG+ Q  S        + +SPE            + R+    SESNI  K + L I
Sbjct: 1013 AKLKLGITQSLSDSKEDPSTNEASPEDDLPSTSDNRTPTSRERSERSESNIDNKMNKLTI 1072

Query: 299  EQ 304
            +Q
Sbjct: 1073 KQ 1074


>Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical protein
            C18D4.2a protein.
          Length = 1817

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 18/62 (29%), Positives = 27/62 (43%)
 Frame = +2

Query: 119  SKHRLGLRQXTSPXSNAVDQSSSSPEIPAERLXAXELKSPRDSXSASESNIPTKEHALXI 298
            +K +LG+ Q  S        + +SPE            + R+    SESNI  K + L I
Sbjct: 1013 AKLKLGITQSLSDSKEDPSTNEASPEDDLPSTSDNRTPTSRERSERSESNIDNKMNKLTI 1072

Query: 299  EQ 304
            +Q
Sbjct: 1073 KQ 1074


>AF026209-4|AAW88411.1|  317|Caenorhabditis elegans Serpentine
           receptor, class h protein2, isoform b protein.
          Length = 317

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -1

Query: 106 SKNTRHXMLSSXVHFPDYLLYFII 35
           SK+T   ML    HF  YLLYF++
Sbjct: 119 SKHTAPTMLYKITHFQTYLLYFLL 142


>Z22177-12|CAA80152.1|  974|Caenorhabditis elegans Hypothetical
           protein F54G8.4 protein.
          Length = 974

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 17/53 (32%), Positives = 20/53 (37%)
 Frame = +3

Query: 126 TALDYDRXHPXRATQSTNLAVPLKSQPNVCXXSN*RVPETXIPHRSPISPQKS 284
           TA    R  P  A + T    P KS+P      N   P T  P   P  P +S
Sbjct: 423 TADSSSRTSPWAADRVTRSVEPTKSRPTSLIVPNTETPRTVSPASKPPLPPQS 475


>Z19155-5|CAA79562.1|  974|Caenorhabditis elegans Hypothetical
           protein F54G8.4 protein.
          Length = 974

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 17/53 (32%), Positives = 20/53 (37%)
 Frame = +3

Query: 126 TALDYDRXHPXRATQSTNLAVPLKSQPNVCXXSN*RVPETXIPHRSPISPQKS 284
           TA    R  P  A + T    P KS+P      N   P T  P   P  P +S
Sbjct: 423 TADSSSRTSPWAADRVTRSVEPTKSRPTSLIVPNTETPRTVSPASKPPLPPQS 475


>U80836-8|AAL32206.2|  212|Caenorhabditis elegans Hypothetical
           protein B0432.9 protein.
          Length = 212

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = -1

Query: 376 HVS*SVCTGLMYCYGNLTLIPVRKLFNXQSVLFCGDIGLRCG 251
           HV+ S  T ++  +G+L       LF   SV+   D+G +CG
Sbjct: 54  HVAPSTVTHVVVTHGHLDHCANLGLFQEASVIMDWDVGRKCG 95


>Z49969-3|CAA90267.1|  792|Caenorhabditis elegans Hypothetical
           protein W01C9.3 protein.
          Length = 792

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 25/112 (22%), Positives = 49/112 (43%), Gaps = 3/112 (2%)
 Frame = +2

Query: 86  PMSCVFTMPIRSKHRLGLRQXT--SPXSNAVDQSSSSPEIPAERLXAXELKSPRDSXSAS 259
           PMS  F++  R+   +GL+Q T  S   +A  Q+  + ++ +       +  P  +  + 
Sbjct: 73  PMSTTFSVNSRTSSLMGLQQPTVFSTQFSAQGQALPAQKVYSNDPRLVSIPRPAGTIPSL 132

Query: 260 ESNIPTKEHALXIEQFPNWNKSQIPVAIHKTGTDTSGDMRANTLRDLKR-CK 412
            S  P++  ++     P+   SQ     +K    +    + N L++LK  CK
Sbjct: 133 GSMPPSRSGSIITGPNPSPPSSQKRKNKNKESKSSLNKPKRNRLQELKNFCK 184


>U58740-2|AAD32276.1|  191|Caenorhabditis elegans Hypothetical
           protein R09H3.3 protein.
          Length = 191

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +2

Query: 161 SNAVDQSSSSPEIPAER-LXAXELKSPRDSXSASESNIPTKEHA 289
           +N ++ +S  PEIPAE  L A +L S +D      S I +  H+
Sbjct: 10  TNQLEGTSKLPEIPAEHYLKALKLSSVKDIQVDQSSPIKSDGHS 53


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,603,150
Number of Sequences: 27780
Number of extensions: 191835
Number of successful extensions: 396
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 396
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)