Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20e12
(597 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical p... 31 0.82
AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein. 31 0.82
AF043702-3|AAK21496.2| 474|Caenorhabditis elegans Hypothetical ... 30 1.1
AF125954-2|AAK68175.1| 193|Caenorhabditis elegans Hypothetical ... 29 1.9
AC006769-3|AAX22281.1| 196|Caenorhabditis elegans Hypothetical ... 29 1.9
Z12017-2|CAA78048.1| 455|Caenorhabditis elegans Hypothetical pr... 29 2.5
U27312-12|AAA68255.1| 451|Caenorhabditis elegans Hypothetical p... 29 2.5
EU068466-1|ABU49431.1| 801|Caenorhabditis elegans PRO-3 protein. 29 2.5
AL132948-40|CAD31812.3| 801|Caenorhabditis elegans Hypothetical... 29 2.5
AF067619-1|AAC17568.2| 368|Caenorhabditis elegans Hypothetical ... 29 2.5
AF022985-13|AAB69968.1| 375|Caenorhabditis elegans Hypothetical... 29 2.5
U58738-1|AAB00602.1| 290|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z36719-7|CAN86592.1| 217|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z36719-2|CAA85317.2| 421|Caenorhabditis elegans Hypothetical pr... 27 7.7
U13070-7|AAC46638.1| 414|Caenorhabditis elegans Rabaptin (rab e... 27 7.7
AF038618-12|AAM98017.2| 397|Caenorhabditis elegans P38 map kina... 27 7.7
AF038618-11|AAM98016.1| 419|Caenorhabditis elegans P38 map kina... 27 7.7
AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical ... 27 7.7
>Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical protein
C35C5.1 protein.
Length = 2962
Score = 30.7 bits (66), Expect = 0.82
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 15/134 (11%)
Frame = +1
Query: 43 STKKQIMPKTGKKLENKPEPLKSSKPE------LATDSEQNVKILKKVD---SEGSN-QK 192
+T+KQ+ P+T ++L + E K + E + E+ V + +KVD EG +K
Sbjct: 1103 TTQKQVDPETIQRLRREDEVRKRKRFEEEDRRGMIRRREERVALQEKVDRMLEEGLRLEK 1162
Query: 193 I--PPRLRRNM--ERVEMLARPTARRLRSLWDEKCAILPPERRDKIKSALEEDYFLSPEQ 360
+ R+R+ ER+EM +RR+R +EK + ER K + E++ E+
Sbjct: 1163 VREAERIRQQQEEERIEMETILISRRVREEEEEKMRL---ERLRKAEREREQERLKREEE 1219
Query: 361 TE-QYFQALSESSK 399
E + + L E+ K
Sbjct: 1220 EERKRLEQLREAEK 1233
>Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical
protein C35C5.1 protein.
Length = 2962
Score = 30.7 bits (66), Expect = 0.82
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 15/134 (11%)
Frame = +1
Query: 43 STKKQIMPKTGKKLENKPEPLKSSKPE------LATDSEQNVKILKKVD---SEGSN-QK 192
+T+KQ+ P+T ++L + E K + E + E+ V + +KVD EG +K
Sbjct: 1103 TTQKQVDPETIQRLRREDEVRKRKRFEEEDRRGMIRRREERVALQEKVDRMLEEGLRLEK 1162
Query: 193 I--PPRLRRNM--ERVEMLARPTARRLRSLWDEKCAILPPERRDKIKSALEEDYFLSPEQ 360
+ R+R+ ER+EM +RR+R +EK + ER K + E++ E+
Sbjct: 1163 VREAERIRQQQEEERIEMETILISRRVREEEEEKMRL---ERLRKAEREREQERLKREEE 1219
Query: 361 TE-QYFQALSESSK 399
E + + L E+ K
Sbjct: 1220 EERKRLEQLREAEK 1233
>AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.
Length = 2962
Score = 30.7 bits (66), Expect = 0.82
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 15/134 (11%)
Frame = +1
Query: 43 STKKQIMPKTGKKLENKPEPLKSSKPE------LATDSEQNVKILKKVD---SEGSN-QK 192
+T+KQ+ P+T ++L + E K + E + E+ V + +KVD EG +K
Sbjct: 1103 TTQKQVDPETIQRLRREDEVRKRKRFEEEDRRGMIRRREERVALQEKVDRMLEEGLRLEK 1162
Query: 193 I--PPRLRRNM--ERVEMLARPTARRLRSLWDEKCAILPPERRDKIKSALEEDYFLSPEQ 360
+ R+R+ ER+EM +RR+R +EK + ER K + E++ E+
Sbjct: 1163 VREAERIRQQQEEERIEMETILISRRVREEEEEKMRL---ERLRKAEREREQERLKREEE 1219
Query: 361 TE-QYFQALSESSK 399
E + + L E+ K
Sbjct: 1220 EERKRLEQLREAEK 1233
>AF043702-3|AAK21496.2| 474|Caenorhabditis elegans Hypothetical
protein W03D8.1 protein.
Length = 474
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +1
Query: 43 STKKQIMPKTGKKLENKPEPLKSSKPELATDSEQNVKILKKVDSEGSN 186
STK+Q++ T K LE +P K KPE E+ + + DS N
Sbjct: 263 STKEQVLTTTRKALETTKKPEKPEKPEKPERPEKPEALPQAQDSYCGN 310
>AF125954-2|AAK68175.1| 193|Caenorhabditis elegans Hypothetical
protein C13B7.6 protein.
Length = 193
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/73 (26%), Positives = 33/73 (45%)
Frame = +1
Query: 121 ELATDSEQNVKILKKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSLWDEKCAILPP 300
E EQ K L K+ G ++ +P + E+ A + + +S EKC + PP
Sbjct: 10 EKGEKDEQTAKFLHKLAENGKDRGLPDCVVAQYEKNAWEATNSDEKYKSC--EKCGMPPP 67
Query: 301 ERRDKIKSALEED 339
D K+++ E+
Sbjct: 68 PPIDGAKNSVVEE 80
>AC006769-3|AAX22281.1| 196|Caenorhabditis elegans Hypothetical
protein Y45G12C.16 protein.
Length = 196
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/73 (26%), Positives = 33/73 (45%)
Frame = +1
Query: 121 ELATDSEQNVKILKKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSLWDEKCAILPP 300
E EQ K L K+ G ++ +P + E+ A + + +S EKC + PP
Sbjct: 10 EKGEKDEQTAKFLHKLAENGKDRGLPDCVVAQYEKNAWEATNSDEKYKSC--EKCGMPPP 67
Query: 301 ERRDKIKSALEED 339
D K+++ E+
Sbjct: 68 PPIDGAKNSVVEE 80
>Z12017-2|CAA78048.1| 455|Caenorhabditis elegans Hypothetical
protein R08D7.2 protein.
Length = 455
Score = 29.1 bits (62), Expect = 2.5
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +1
Query: 64 PKTGKKLENKPEPLKSSKPELATDSEQNVKILKKVDSEGSNQKIPPRL 207
P T K L+ P+P+ S+K D E K+ K ++ + QK PP L
Sbjct: 219 PSTSKLLKTAPKPVLSAKDRKKED-EVLAKLRAKYGNKNALQKKPPIL 265
>U27312-12|AAA68255.1| 451|Caenorhabditis elegans Hypothetical
protein F26A1.13 protein.
Length = 451
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/97 (20%), Positives = 43/97 (44%)
Frame = +1
Query: 43 STKKQIMPKTGKKLENKPEPLKSSKPELATDSEQNVKILKKVDSEGSNQKIPPRLRRNME 222
+ K + P KK+ + P PL+ S P+ + E+N + K+ ++I R +
Sbjct: 259 AVKLKPKPTWSKKVASSPSPLRLSLPKKSKKEEENHFLKKRSGRHSQLEEIQLLAIRTRQ 318
Query: 223 RVEMLARPTARRLRSLWDEKCAILPPERRDKIKSALE 333
++E ++ + + + I+ R KI+ + E
Sbjct: 319 KIEADRITSSNSMAAAKYRQLIIVDRASRMKIEKSSE 355
>EU068466-1|ABU49431.1| 801|Caenorhabditis elegans PRO-3 protein.
Length = 801
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/58 (24%), Positives = 30/58 (51%)
Frame = +1
Query: 121 ELATDSEQNVKILKKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSLWDEKCAIL 294
E+ +D+E N K LK+V + N K + +N+ER + + + + ++C ++
Sbjct: 273 EMDSDAEDNTKTLKEVMTSFRNVKKTRKREKNVERAKKMISKKKKAKKEGRSKECNLM 330
>AL132948-40|CAD31812.3| 801|Caenorhabditis elegans Hypothetical
protein Y39B6A.14 protein.
Length = 801
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/58 (24%), Positives = 30/58 (51%)
Frame = +1
Query: 121 ELATDSEQNVKILKKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSLWDEKCAIL 294
E+ +D+E N K LK+V + N K + +N+ER + + + + ++C ++
Sbjct: 273 EMDSDAEDNTKTLKEVMTSFRNVKKTRKREKNVERAKKMISKKKKAKKEGRSKECNLM 330
>AF067619-1|AAC17568.2| 368|Caenorhabditis elegans Hypothetical
protein K03E5.3 protein.
Length = 368
Score = 29.1 bits (62), Expect = 2.5
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +1
Query: 145 NVKILKKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSLWDEKCAILPPERRDKIKS 324
N+K VDS + + P+ N++++E + T L L + PPERR K
Sbjct: 266 NIKSWPGVDSFPHYKAVFPQWPVNLKKLEETSCLTGNGLDVL--REILRYPPERRLTAKG 323
Query: 325 ALEEDYFL 348
AL YFL
Sbjct: 324 ALSHRYFL 331
>AF022985-13|AAB69968.1| 375|Caenorhabditis elegans Hypothetical
protein T15B7.15 protein.
Length = 375
Score = 29.1 bits (62), Expect = 2.5
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 5/112 (4%)
Frame = +1
Query: 49 KKQIMPKTGKKLENKPEPLKSSKPELATDSEQNVKILKKVDSEG-SNQKIPPRLRRNMER 225
KKQ M + + LE K L + E+N+K+ ++ G + +K +R +E
Sbjct: 207 KKQDMLRMEQMLEEKQSELTQEIGKTQEREEENLKLRSLLEKSGQTTEKALKDSKRRLEE 266
Query: 226 VEMLARPTARRLRSLWDEKCAILPP--ERRDKIK--SALEEDYFLSPEQTEQ 369
E + T + + +E + L + DK + ++L ED L +QT +
Sbjct: 267 SENKRKTTLEKYIQIENELNSKLDEALQNSDKCQKMTSLLEDQLLREQQTRK 318
>U58738-1|AAB00602.1| 290|Caenorhabditis elegans Hypothetical
protein F31A9.4 protein.
Length = 290
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -1
Query: 153 FYILFGICCQFRFRTFQWLRFIFKFLSSFRHDLLFCTL 40
F++L IC +RF+ + I + F H + FC L
Sbjct: 32 FFVLLKICSLYRFQILDFFPTIQNNKNIFSHGIKFCEL 69
>Z36719-7|CAN86592.1| 217|Caenorhabditis elegans Hypothetical
protein C06C3.9 protein.
Length = 217
Score = 27.5 bits (58), Expect = 7.7
Identities = 9/21 (42%), Positives = 14/21 (66%), Gaps = 2/21 (9%)
Frame = +2
Query: 185 TRKYHHAYV--VTWSGWKCWH 241
TR + H+ V + + GW+CWH
Sbjct: 122 TRDFSHSIVADLVYRGWQCWH 142
>Z36719-2|CAA85317.2| 421|Caenorhabditis elegans Hypothetical
protein C06C3.4 protein.
Length = 421
Score = 27.5 bits (58), Expect = 7.7
Identities = 9/21 (42%), Positives = 14/21 (66%), Gaps = 2/21 (9%)
Frame = +2
Query: 185 TRKYHHAYV--VTWSGWKCWH 241
TR + H+ V + + GW+CWH
Sbjct: 131 TRDFSHSIVADLVYRGWQCWH 151
>U13070-7|AAC46638.1| 414|Caenorhabditis elegans Rabaptin (rab
effector) protein 5 protein.
Length = 414
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 494 LKLTSHFCRC*SSFCLSINSLRFTVPPGPDQR 399
+K+ H C FC+ N L+ TVP GP+ R
Sbjct: 360 VKVKPHCLHCGRIFCM--NCLKDTVPSGPNHR 389
>AF038618-12|AAM98017.2| 397|Caenorhabditis elegans P38 map kinase
family protein 2,isoform b protein.
Length = 397
Score = 27.5 bits (58), Expect = 7.7
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +1
Query: 163 KVDSEGSNQKIP---PRLRRNMERVEMLARPTARRLRSLWDEKCAILPPERRDKIKSALE 333
K+ SE + I P +R++ + +A P A L E IL P+RR + SAL
Sbjct: 274 KIQSEEARNYIKNRSPIIRQDFVTLFPMASPYALELL----EMMLILDPDRRISVSSALR 329
Query: 334 EDY 342
DY
Sbjct: 330 HDY 332
>AF038618-11|AAM98016.1| 419|Caenorhabditis elegans P38 map kinase
family protein 2,isoform a protein.
Length = 419
Score = 27.5 bits (58), Expect = 7.7
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +1
Query: 163 KVDSEGSNQKIP---PRLRRNMERVEMLARPTARRLRSLWDEKCAILPPERRDKIKSALE 333
K+ SE + I P +R++ + +A P A L E IL P+RR + SAL
Sbjct: 291 KIQSEEARNYIKNRSPIIRQDFVTLFPMASPYALELL----EMMLILDPDRRISVSSALR 346
Query: 334 EDY 342
DY
Sbjct: 347 HDY 349
>AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical
protein F52G3.1 protein.
Length = 1172
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 280 FRPIKSAGDEPLAVPTFPPAP 218
F+P+ + GD PL PT P+P
Sbjct: 861 FQPLFNTGDAPLLYPTAAPSP 881
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,768,278
Number of Sequences: 27780
Number of extensions: 289001
Number of successful extensions: 1116
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1110
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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