Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte20e11
         (621 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    28   0.064
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    23   2.4  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    23   3.2  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    22   5.5  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    22   5.5  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    21   7.3  
AY078401-1|AAL83704.1|   27|Apis mellifera major royal jelly pro...    21   7.3  

>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 28.3 bits (60), Expect = 0.064
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +2

Query: 254 LLIIGDSGVGKSCLLLRFADNTFSGSYITTIGVDFKIRTLEVNGEKVKLQ 403
           L+ IGD+  G + ++   +DN+F     +T   D +  T  +NGE   LQ
Sbjct: 200 LVYIGDNE-GFALIIYNNSDNSFQRLTSSTFASDPRYTTFTINGESFTLQ 248


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +2

Query: 266 GDSGVGKSCLLLRFADNTFSGSYITTIG 349
           GD  VG +CL  +   ++F+GS +T +G
Sbjct: 270 GDK-VGPACLPFQHFLDSFAGSDVTVLG 296


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -3

Query: 61  LQELKKSKTVTRP 23
           LQE+ KSK++T P
Sbjct: 302 LQEMNKSKSITEP 314


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -2

Query: 296 EDNSFRHRCHR*SAV*KDDRTRAPYCHFLGCLIL 195
           +D S+  R  +   + K  R R  YC +  CL +
Sbjct: 140 KDLSYACREEKSCIIDKRQRNRCQYCRYQKCLAM 173


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -2

Query: 296 EDNSFRHRCHR*SAV*KDDRTRAPYCHFLGCLIL 195
           +D S+  R  +   + K  R R  YC +  CL +
Sbjct: 140 KDLSYACREEKSCIIDKRQRNRCQYCRYQKCLAM 173


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
          RJP57-2 protein.
          Length = 464

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 28 WSLFLIFLALAT*NINGG 81
          W L ++ L +A  NI GG
Sbjct: 4  WLLLMVCLGIACQNIRGG 21


>AY078401-1|AAL83704.1|   27|Apis mellifera major royal jelly
          protein MRJP4 protein.
          Length = 27

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 28 WSLFLIFLALAT*NINGG 81
          W L ++ L +A  NI GG
Sbjct: 4  WLLLMVCLGIACQNIRGG 21


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,411
Number of Sequences: 438
Number of extensions: 3348
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)