Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte20e10
(656 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0713 - 31402534-31403131,31403281-31403430,31403526-31403728 33 0.26
07_03_1775 + 29431106-29431193,29431290-29431329,29431620-294320... 30 1.4
08_02_0317 + 15705184-15705391,15706194-15706270,15706364-157064... 29 2.5
08_01_0005 + 47929-48201,48663-48788,49009-49054,49188-49270,496... 29 2.5
01_06_1520 - 37950262-37950271,37950639-37950749,37950965-379511... 29 2.5
11_06_0690 + 26303733-26306540 29 3.3
10_08_1008 - 22222051-22222377,22222479-22222640,22223179-222233... 29 3.3
12_02_1071 + 25824311-25824460,25824774-25824857,25825168-258252... 28 7.5
12_01_1078 - 11202284-11202343,11202941-11203000,11203036-112030... 28 7.5
09_01_0013 - 355103-355435 28 7.5
06_01_0868 - 6606913-6607000,6607516-6608010,6610313-6610761,661... 28 7.5
06_01_0486 - 3455030-3455770 28 7.5
06_01_0454 - 3234331-3236299,3237254-3238074 28 7.5
02_05_0924 - 32749682-32750200,32750756-32750959,32751062-327511... 28 7.5
01_06_1052 + 34129126-34130490 28 7.5
12_01_0370 - 2835071-2835285,2835427-2836045 27 9.9
09_04_0288 + 16416409-16416603,16417584-16417635,16417842-164178... 27 9.9
08_02_0495 - 17803201-17803571,17803982-17804063 27 9.9
06_01_0455 - 3241217-3243176,3244426-3244670,3244869-3245255 27 9.9
04_04_0214 - 23674270-23676858,23677574-23680843,23680941-236811... 27 9.9
04_03_0571 - 17269005-17269927,17270433-17270688,17272492-17273301 27 9.9
04_03_0361 + 14912420-14912720,14912945-14913117,14913474-149137... 27 9.9
>01_06_0713 - 31402534-31403131,31403281-31403430,31403526-31403728
Length = 316
Score = 32.7 bits (71), Expect = 0.26
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +2
Query: 329 HASRHGGRA-APVPEP-SDRLRPQPRARGPSSSLYEIHAVRVEPEHHQELQ*VGREEE 496
HAS+ R+ AP PEP +D P+P A SS+ E+ EPE QE + V ++EE
Sbjct: 166 HASKSSPRSTAPKPEPVADGQHPEP-AENESSASAELEVPEPEPE--QESEPVVKQEE 220
>07_03_1775 +
29431106-29431193,29431290-29431329,29431620-29432080,
29432173-29432363,29432503-29432635,29432839-29433428
Length = 500
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = +2
Query: 320 PVLHASRHGG--RAAPVPEPSDRLRPQPRARGPSSSLYEIHAVRVEPEHHQ 466
P H +RHGG RAA P PS P P P S+ + + P Q
Sbjct: 77 PPHHHNRHGGHHRAAHTPAPSPAPSPSPFTAPPKSASPAAITIPISPSTPQ 127
>08_02_0317 +
15705184-15705391,15706194-15706270,15706364-15706406,
15706507-15706564,15707576-15707645,15708409-15708876
Length = 307
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/57 (31%), Positives = 22/57 (38%)
Frame = +2
Query: 281 PNAIAAYNKHHGGPVLHASRHGGRAAPVPEPSDRLRPQPRARGPSSSLYEIHAVRVE 451
PN I++ + HG P H G A VP P AR E+H VE
Sbjct: 4 PNPISSSGQTHGNPTAHEQMELGNNAIVPSNGGNNNPNMAARQRLRWTNELHDRFVE 60
>08_01_0005 +
47929-48201,48663-48788,49009-49054,49188-49270,
49651-49728,49831-49884,50004-50138,50222-51691
Length = 754
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/60 (33%), Positives = 26/60 (43%)
Frame = +3
Query: 189 PSVPPQVGYCFHSPKKHPWRPIMGYEEIEVTPMPSQPITNTMVDPCYTPAGMAAEPLRFP 368
PS+PP G SP+ P++ +T P P+ M P TPA M P FP
Sbjct: 501 PSIPP--GAPQLSPQGPSSMPVLS-SPAGLTTQPPYPLPMQMRPPMATPAQMRGPPSPFP 557
>01_06_1520 -
37950262-37950271,37950639-37950749,37950965-37951187,
37951291-37951525,37951641-37951772,37951865-37952230
Length = 358
Score = 29.5 bits (63), Expect = 2.5
Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +2
Query: 320 PVLHASRHGGRAAPVPEPSDRLRPQPRARGPSSSLYEIHAVRV---EPEHHQELQ*VGRE 490
PV+ +S AAP S RLR P A SSS AV + P H Q VGR+
Sbjct: 13 PVVASSSSAAAAAPRRPRSLRLRVTPYASVSSSSSPSTFAVSIPPPPPARHSRKQLVGRD 72
>11_06_0690 + 26303733-26306540
Length = 935
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 332 ASRHGGRAAPVPEPSDRLRPQPRARGPSSSLYE-IHAVRVEP 454
A+ HG R + SD RP P A P++S E + A RV P
Sbjct: 4 ATAHGRRPSQADAHSDGRRPTPSAVAPAASWAEVVRAPRVGP 45
>10_08_1008 -
22222051-22222377,22222479-22222640,22223179-22223310,
22224556-22224608,22224713-22225256
Length = 405
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 308 HHGGPVLHASRHGGRAAPVPE 370
HH GP+L+A+ G AAP P+
Sbjct: 77 HHPGPMLYAAAPAGGAAPPPQ 97
>12_02_1071 +
25824311-25824460,25824774-25824857,25825168-25825246,
25825334-25825428,25825940-25826067,25826160-25826393,
25826509-25826683,25826716-25826748,25827292-25827375,
25827929-25828169,25828275-25828453,25828800-25828873,
25830800-25830950,25831178-25831252,25831748-25831778,
25832107-25832339
Length = 681
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +2
Query: 530 GVKGNRRNWYPRTKGLRAENWRKNNRHYVLEERGLYRDGTLG 655
G GNRR R K E W ++ R + RG RDG G
Sbjct: 574 GTGGNRRAVLGRAK--EGEKWGEDCRRNISSRRGTGRDGDWG 613
>12_01_1078 -
11202284-11202343,11202941-11203000,11203036-11203050,
11203322-11204026
Length = 279
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 216 CFHSPKKHPWRPIMGYEEIEVTPMPS 293
C HSP HP RP + EV+ PS
Sbjct: 42 CAHSPSPHPLRPSAATADEEVSLPPS 67
>09_01_0013 - 355103-355435
Length = 110
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 530 GVKGNRRNWYPRTKGLRAENWRKNNR 607
G G RR W PR + R WR R
Sbjct: 31 GAAGGRRAWRPRWRPQRRPRWRPQRR 56
>06_01_0868 -
6606913-6607000,6607516-6608010,6610313-6610761,
6610863-6610979,6611892-6612863
Length = 706
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +3
Query: 174 ETAGGPSVPPQVGYCFHSPKKHPWRPIMGYEEIEVTPMPSQPITNTMVDP 323
E GPS+P ++ + H+ +H + Y +V P+P + T+ DP
Sbjct: 474 EPRHGPSIP-EIQHVPHAYYRHLAPSDVPYYRSQVDPLPDRVAARTVADP 522
>06_01_0486 - 3455030-3455770
Length = 246
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +2
Query: 281 PNAIAAYNKHHGGPVLHASRHGGRAAPVPEPSDRLRPQPRARGPS 415
P + ++ HHG P S GG PE +P P R PS
Sbjct: 30 PGSGSSGGGHHGKPPGSGSGGGGHHGKPPEHHHHHKPPPSPRCPS 74
>06_01_0454 - 3234331-3236299,3237254-3238074
Length = 929
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -2
Query: 397 GLRSKPVTRFGNRSGSAAMPAGV*HGSTMVFVIGCDGIGVTSIS 266
G R ++R S SAA H MV ++GC G+G T+++
Sbjct: 174 GPRDDIISRLEQESSSAAAQ----HDVRMVSIVGCAGLGKTTLA 213
>02_05_0924 -
32749682-32750200,32750756-32750959,32751062-32751109,
32751769-32751819,32751907-32752032,32752117-32752257,
32752750-32752971,32753160-32753312,32753536-32753718,
32753964-32754110,32754212-32754319,32754426-32754530,
32754824-32754928,32755243-32755310,32755498-32755576,
32755876-32755935,32756023-32756076,32756168-32756233,
32756701-32756753,32757042-32757096,32757645-32757787,
32758236-32758333,32758436-32758716
Length = 1022
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = -1
Query: 611 SVCYSFANSPPGVPLSLGTNFVGFP*HP---HNVVPDSFRKIPLRV 483
SV Y++ P GV LG N+V P P HN+ D + P R+
Sbjct: 121 SVAYAYVVLPTGVLGHLGVNYVCRPAVPVLTHNLYADLYSVAPYRL 166
>01_06_1052 + 34129126-34130490
Length = 454
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = +2
Query: 287 AIAAYNKHHGGPVLHASRHGGRAAPVPEPSDRLRPQPRARG 409
++ + ++H GP+ R GG A P P L A G
Sbjct: 141 SVTSIGEYHSGPLARKPRRGGTNATAPPPPPALSRSQFAAG 181
>12_01_0370 - 2835071-2835285,2835427-2836045
Length = 277
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 338 RHGGRAAPVPEPSDRLRPQPRA 403
R G +AP P P+ R+ PQP A
Sbjct: 139 RRRGESAPAPPPAVRVTPQPPA 160
>09_04_0288 +
16416409-16416603,16417584-16417635,16417842-16417890,
16418354-16418497,16418730-16418783,16418883-16418948,
16419174-16419252,16419390-16419467
Length = 238
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 353 AAPVPEPSDRLRPQPRARGPSSSLY 427
A+P P P+ RLRP A SSS +
Sbjct: 2 ASPAPPPTARLRPSQAASSASSSSF 26
>08_02_0495 - 17803201-17803571,17803982-17804063
Length = 150
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -3
Query: 273 QFLHSPL*VSKGVFLVNGNNSPLVAGHWDLL 181
+F+ SP+ KGVFL N N + + G W++L
Sbjct: 90 RFISSPIASLKGVFLDNSNQA--LEGEWNVL 118
>06_01_0455 - 3241217-3243176,3244426-3244670,3244869-3245255
Length = 863
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -2
Query: 325 HGSTMVFVIGCDGIGVTSIS 266
HG MV ++GC G+G T+++
Sbjct: 130 HGVRMVSIVGCAGLGKTTLA 149
>04_04_0214 -
23674270-23676858,23677574-23680843,23680941-23681119,
23681200-23681559,23681645-23682086,23682199-23682332,
23682479-23682680
Length = 2391
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -2
Query: 421 RAARAACSGLRSKPVTRFGNRSGSAAMPAGV*HGST 314
RA A SGL S P F ++G +MP V +G T
Sbjct: 120 RAGLHALSGLASDPTHEFLKQNGINSMPKSVAYGYT 155
>04_03_0571 - 17269005-17269927,17270433-17270688,17272492-17273301
Length = 662
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -2
Query: 430 LV*RAARAACSGLRSKPVTRFGNRSGSAAMPAGV 329
LV A AA +G ++K TR+ N A P GV
Sbjct: 111 LVAAVAAAAAAGRKAKAATRYSNSFPRLACPGGV 144
>04_03_0361 +
14912420-14912720,14912945-14913117,14913474-14913779,
14913862-14913936,14913976-14914191,14914741-14915527,
14915587-14915681
Length = 650
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +2
Query: 281 PNAIAAYNKHHGGPVLHASRHGGRAAPVPEPSDRLRPQPRARG 409
P+AI A + P S HGG P +P R Q R RG
Sbjct: 105 PHAIGAGFQAPMAPPFGGSGHGGVFVPPIQPQARAASQGRGRG 147
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,631,652
Number of Sequences: 37544
Number of extensions: 450247
Number of successful extensions: 1630
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1626
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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